RNA–Protein interactions for RNA: ENST00000533000.5

UBXN1-214, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-214ENST00000533000 EHMT2Q96KQ7 1210 aa23.16■■□□□ 1.3
UBXN1-214ENST00000533000 MAGI2Q86UL8 1455 aa23.16■■□□□ 1.3
UBXN1-214ENST00000533000 ATP1B4Q9UN42 357 aaPredicted RBP23.11■■□□□ 1.29
UBXN1-214ENST00000533000 ATP10AO60312 1499 aa23.07■■□□□ 1.28
UBXN1-214ENST00000533000 EFCAB2Q5VUJ9 269 aa23.07■■□□□ 1.28
UBXN1-214ENST00000533000 ARHGAP35Q9NRY4 1499 aa23.06■■□□□ 1.28
UBXN1-214ENST00000533000 UBTFP17480 764 aaKnown RBP23.06■■□□□ 1.28
UBXN1-214ENST00000533000 CEBPAP49715 358 aaPredicted RBP23.06■■□□□ 1.28
UBXN1-214ENST00000533000 ARHGEF12Q9NZN5 1544 aa23.05■■□□□ 1.28
UBXN1-214ENST00000533000 FER1L4A9Z1Z3 1794 aa23.04■■□□□ 1.28
UBXN1-214ENST00000533000 C9orf84Q5VXU9 1444 aa23.03■■□□□ 1.28
UBXN1-214ENST00000533000 CERKQ8TCT0 537 aa23.03■■□□□ 1.28
UBXN1-214ENST00000533000 KIF14Q15058 1648 aa23.03■■□□□ 1.28
UBXN1-214ENST00000533000 FMN1Q68DA7 1419 aa23.02■■□□□ 1.28
UBXN1-214ENST00000533000 AFAP1Q8N556 730 aa23.02■■□□□ 1.28
UBXN1-214ENST00000533000 CDK11AQ9UQ88 783 aaPredicted RBP22.99■■□□□ 1.27
UBXN1-214ENST00000533000 MYO5CQ9NQX4 1742 aa22.99■■□□□ 1.27
UBXN1-214ENST00000533000 TROQ12816 1431 aaPredicted RBP22.99■■□□□ 1.27
UBXN1-214ENST00000533000 ARHGAP5Q13017 1502 aa22.95■■□□□ 1.26
UBXN1-214ENST00000533000 ZNF518AQ6AHZ1 1483 aa22.95■■□□□ 1.26
UBXN1-214ENST00000533000 KDM5CP41229 1560 aa22.94■■□□□ 1.26
UBXN1-214ENST00000533000 LRRIQ1Q96JM4 1722 aa22.91■■□□□ 1.26
UBXN1-214ENST00000533000 PREX1Q8TCU6 1659 aa22.9■■□□□ 1.26
UBXN1-214ENST00000533000 DIP2CQ9Y2E4 1556 aa22.9■■□□□ 1.26
UBXN1-214ENST00000533000 MYT1LQ9UL68 1186 aa22.9■■□□□ 1.26
UBXN1-214ENST00000533000 CLIP1P30622 1438 aa22.89■■□□□ 1.25
UBXN1-214ENST00000533000 CHIC1Q5VXU3 224 aa22.88■■□□□ 1.25
UBXN1-214ENST00000533000 TRAPPC8Q9Y2L5 1435 aa22.88■■□□□ 1.25
UBXN1-214ENST00000533000 STRCQ7RTU9 1775 aa22.87■■□□□ 1.25
UBXN1-214ENST00000533000 MLH3Q9UHC1 1453 aa22.86■■□□□ 1.25
UBXN1-214ENST00000533000 CDC42BPBQ9Y5S2 1711 aa22.86■■□□□ 1.25
UBXN1-214ENST00000533000 ABCA6Q8N139 1617 aa22.86■■□□□ 1.25
UBXN1-214ENST00000533000 REREQ9P2R6 1566 aa22.84■■□□□ 1.25
UBXN1-214ENST00000533000 UHRF1BP1Q6BDS2 1440 aa22.84■■□□□ 1.25
UBXN1-214ENST00000533000 DMRT2Q9Y5R5 561 aa22.81■■□□□ 1.24
UBXN1-214ENST00000533000 ABCC1P33527 1531 aa22.81■■□□□ 1.24
UBXN1-214ENST00000533000 AGLP35573 1532 aa22.79■■□□□ 1.24
UBXN1-214ENST00000533000 CASKIN1Q8WXD9 1431 aa22.79■■□□□ 1.24
UBXN1-214ENST00000533000 PREX2Q70Z35 1606 aa22.79■■□□□ 1.24
UBXN1-214ENST00000533000 C3P01024 1663 aa22.78■■□□□ 1.24
UBXN1-214ENST00000533000 SETD1BQ9UPS6 1966 aaKnown RBP22.76■■□□□ 1.23
UBXN1-214ENST00000533000 ITSN2Q9NZM3 1697 aa22.75■■□□□ 1.23
UBXN1-214ENST00000533000 KIDINS220Q9ULH0 1771 aa22.74■■□□□ 1.23
UBXN1-214ENST00000533000 PTPRTO14522 1441 aa22.74■■□□□ 1.23
UBXN1-214ENST00000533000 CCDC18Q5T9S5 1454 aa22.73■■□□□ 1.23
UBXN1-214ENST00000533000 ESF1Q9H501 851 aaKnown RBP22.72■■□□□ 1.23
UBXN1-214ENST00000533000 ILDR2Q71H61 639 aa22.71■■□□□ 1.23
UBXN1-214ENST00000533000 ZNF777Q9ULD5 760 aaPredicted RBP22.71■■□□□ 1.23
UBXN1-214ENST00000533000 CDC42BPAQ5VT25 1732 aa22.71■■□□□ 1.23
UBXN1-214ENST00000533000 SAMD9LQ8IVG5 1584 aa22.69■■□□□ 1.22
UBXN1-214ENST00000533000 HNRNPMP52272 730 aaKnown RBP eCLIP22.68■■□□□ 1.22
UBXN1-214ENST00000533000 LTBP4Q8N2S1 1624 aa22.68■■□□□ 1.22
UBXN1-214ENST00000533000 GPATCH8Q9UKJ3 1502 aaKnown RBP22.67■■□□□ 1.22
UBXN1-214ENST00000533000 NCOA1Q15788 1441 aa22.67■■□□□ 1.22
UBXN1-214ENST00000533000 DISP3Q9P2K9 1392 aa22.67■■□□□ 1.22
UBXN1-214ENST00000533000 CNTLNQ9NXG0 1405 aa22.66■■□□□ 1.22
UBXN1-214ENST00000533000 SYCP2Q9BX26 1530 aa22.65■■□□□ 1.22
UBXN1-214ENST00000533000 FYCO1Q9BQS8 1478 aa22.65■■□□□ 1.22
UBXN1-214ENST00000533000 SPAG9O60271 1321 aaKnown RBP22.64■■□□□ 1.22
UBXN1-214ENST00000533000 ZMYM3Q14202 1370 aa22.63■■□□□ 1.21
UBXN1-214ENST00000533000 NCKAP5LQ9HCH0 1330 aa22.6■■□□□ 1.21
UBXN1-214ENST00000533000 NPATQ14207 1427 aa22.6■■□□□ 1.21
UBXN1-214ENST00000533000 CAMSAP1Q5T5Y3 1602 aa22.6■■□□□ 1.21
UBXN1-214ENST00000533000 SUPT6HQ7KZ85 1726 aaKnown RBP22.57■■□□□ 1.2
UBXN1-214ENST00000533000 CFDP1Q9UEE9 299 aaPredicted RBP22.57■■□□□ 1.2
UBXN1-214ENST00000533000 MROH2AA6NES4 1674 aa22.57■■□□□ 1.2
UBXN1-214ENST00000533000 ATP7AQ04656 1500 aa22.57■■□□□ 1.2
UBXN1-214ENST00000533000 KIAA1107Q9UPP5 1409 aa22.57■■□□□ 1.2
UBXN1-214ENST00000533000 PLXNC1O60486 1568 aa22.55■■□□□ 1.2
UBXN1-214ENST00000533000 A2MP01023 1474 aa22.54■■□□□ 1.2
UBXN1-214ENST00000533000 SOCS7O14512 581 aa22.54■■□□□ 1.2
UBXN1-214ENST00000533000 GGT6Q6P531 493 aa22.54■■□□□ 1.2
UBXN1-214ENST00000533000 PTPRKQ15262 1439 aa22.54■■□□□ 1.2
UBXN1-214ENST00000533000 INO80Q9ULG1 1556 aaPredicted RBP22.54■■□□□ 1.2
UBXN1-214ENST00000533000 ZNF335Q9H4Z2 1342 aaPredicted RBP22.54■■□□□ 1.2
UBXN1-214ENST00000533000 ZNF644Q9H582 1327 aaPredicted RBP22.54■■□□□ 1.2
UBXN1-214ENST00000533000 IQSEC2Q5JU85 1478 aa22.54■■□□□ 1.2
UBXN1-214ENST00000533000 CLTCQ00610 1675 aaKnown RBP22.52■■□□□ 1.2
UBXN1-214ENST00000533000 CCNB3Q8WWL7 1395 aa22.52■■□□□ 1.2
UBXN1-214ENST00000533000 PLEKHH2Q8IVE3 1493 aa22.5■■□□□ 1.19
UBXN1-214ENST00000533000 SPATA31D1Q6ZQQ2 1576 aa22.49■■□□□ 1.19
UBXN1-214ENST00000533000 MYO3AQ8NEV4 1616 aa22.48■■□□□ 1.19
UBXN1-214ENST00000533000 MTUS2Q5JR59 1369 aa22.47■■□□□ 1.19
UBXN1-214ENST00000533000 TCOF1Q13428 1488 aaKnown RBP22.47■■□□□ 1.19
UBXN1-214ENST00000533000 PLA2R1Q13018 1463 aa22.46■■□□□ 1.19
UBXN1-214ENST00000533000 MBD5Q9P267 1494 aa22.46■■□□□ 1.19
UBXN1-214ENST00000533000 PKD2Q13563 968 aa22.45■■□□□ 1.18
UBXN1-214ENST00000533000 CEP170BQ9Y4F5 1589 aaPredicted RBP22.45■■□□□ 1.18
UBXN1-214ENST00000533000 ZNF142P52746 1687 aaPredicted RBP22.44■■□□□ 1.18
UBXN1-214ENST00000533000 UBAP1LF5GYI3 381 aa22.43■■□□□ 1.18
UBXN1-214ENST00000533000 TIAM1Q13009 1591 aa22.42■■□□□ 1.18
UBXN1-214ENST00000533000 PPP6R1Q9UPN7 881 aa22.41■■□□□ 1.18
UBXN1-214ENST00000533000 FBXO31Q5XUX0 539 aaPredicted RBP22.39■■□□□ 1.17
UBXN1-214ENST00000533000 DHX29Q7Z478 1369 aaKnown RBP22.38■■□□□ 1.17
UBXN1-214ENST00000533000 ADGBQ8N7X0 1667 aa22.38■■□□□ 1.17
UBXN1-214ENST00000533000 A2ML1A8K2U0 1454 aa22.37■■□□□ 1.17
UBXN1-214ENST00000533000 RTEL1-TNFRSF6BF6WH68 1400 aa22.37■■□□□ 1.17
UBXN1-214ENST00000533000 DNMT1P26358 1616 aaKnown RBP22.35■■□□□ 1.17
UBXN1-214ENST00000533000 CEP162Q5TB80 1403 aa22.35■■□□□ 1.17
UBXN1-214ENST00000533000 KIF3BO15066 747 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms