RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 FANCD2Q9BXW9 1451 aa19.17■□□□□ 0.66
PCDHA9-202ENST00000532602 HSPA5P11021 654 aaKnown RBP19.17■□□□□ 0.66
PCDHA9-202ENST00000532602 NUP155O75694 1391 aa19.17■□□□□ 0.66
PCDHA9-202ENST00000532602 ANP32EQ9BTT0 268 aa19.16■□□□□ 0.66
PCDHA9-202ENST00000532602 JPH4Q96JJ6 628 aa19.16■□□□□ 0.66
PCDHA9-202ENST00000532602 TPRNQ4KMQ1 711 aa19.15■□□□□ 0.66
PCDHA9-202ENST00000532602 MS4A1P11836 297 aa19.15■□□□□ 0.66
PCDHA9-202ENST00000532602 MPHOSPH9Q99550 1183 aa19.15■□□□□ 0.66
PCDHA9-202ENST00000532602 MORC1Q86VD1 984 aa19.14■□□□□ 0.66
PCDHA9-202ENST00000532602 TAOK2Q9UL54 1235 aa19.13■□□□□ 0.65
PCDHA9-202ENST00000532602 ZRSR1Q15695 479 aaKnown RBP19.13■□□□□ 0.65
PCDHA9-202ENST00000532602 RUSC2Q8N2Y8 1516 aa19.12■□□□□ 0.65
PCDHA9-202ENST00000532602 RAB3GAP2Q9H2M9 1393 aa19.11■□□□□ 0.65
PCDHA9-202ENST00000532602 CYB5RLQ6IPT4 315 aa19.11■□□□□ 0.65
PCDHA9-202ENST00000532602 ROCK2O75116 1388 aaKnown RBP19.11■□□□□ 0.65
PCDHA9-202ENST00000532602 ANKRD30AQ9BXX3 1397 aa19.09■□□□□ 0.65
PCDHA9-202ENST00000532602 SPAG9O60271 1321 aaKnown RBP19.06■□□□□ 0.64
PCDHA9-202ENST00000532602 RGS3P49796 1198 aa19.06■□□□□ 0.64
PCDHA9-202ENST00000532602 OS9Q13438 667 aaPredicted RBP19.05■□□□□ 0.64
PCDHA9-202ENST00000532602 WASHC2CQ9Y4E1 1318 aa19.05■□□□□ 0.64
PCDHA9-202ENST00000532602 NUTM2FA1L443 756 aa19.04■□□□□ 0.64
PCDHA9-202ENST00000532602 TIMELESSQ9UNS1 1208 aa19.04■□□□□ 0.64
PCDHA9-202ENST00000532602 HDGFL2Q7Z4V5 671 aaPredicted RBP19.04■□□□□ 0.64
PCDHA9-202ENST00000532602 GOLGA2Q08379 1002 aa19.03■□□□□ 0.64
PCDHA9-202ENST00000532602 RAD54L2Q9Y4B4 1467 aa19.01■□□□□ 0.63
PCDHA9-202ENST00000532602 CCDC18Q5T9S5 1454 aa19■□□□□ 0.63
PCDHA9-202ENST00000532602 CSB-PGBD3P0DP91 1061 aa19■□□□□ 0.63
PCDHA9-202ENST00000532602 TULP1O00294 542 aaPredicted RBP18.99■□□□□ 0.63
PCDHA9-202ENST00000532602 RTF1Q92541 710 aaKnown RBP18.98■□□□□ 0.63
PCDHA9-202ENST00000532602 FGD1P98174 961 aa18.97■□□□□ 0.63
PCDHA9-202ENST00000532602 TRIM44Q96DX7 344 aaPredicted RBP18.96■□□□□ 0.63
PCDHA9-202ENST00000532602 ZNF330Q9Y3S2 320 aaPredicted RBP18.96■□□□□ 0.63
PCDHA9-202ENST00000532602 CCDC9Q9Y3X0 531 aaKnown RBP18.95■□□□□ 0.62
PCDHA9-202ENST00000532602 GLIPR1L2Q4G1C9 344 aa18.95■□□□□ 0.62
PCDHA9-202ENST00000532602 FGD5Q6ZNL6 1462 aa18.95■□□□□ 0.62
PCDHA9-202ENST00000532602 KTN1Q86UP2 1357 aaKnown RBP18.94■□□□□ 0.62
PCDHA9-202ENST00000532602 PRDM2Q13029 1718 aa18.94■□□□□ 0.62
PCDHA9-202ENST00000532602 KCNJ4P48050 445 aa18.94■□□□□ 0.62
PCDHA9-202ENST00000532602 EID1Q9Y6B2 187 aa18.94■□□□□ 0.62
PCDHA9-202ENST00000532602 B4GALNT3Q6L9W6 998 aa18.94■□□□□ 0.62
PCDHA9-202ENST00000532602 PTPRGP23470 1445 aa18.94■□□□□ 0.62
PCDHA9-202ENST00000532602 OSCARQ8IYS5 282 aa18.93■□□□□ 0.62
PCDHA9-202ENST00000532602 U2AF1L5P0DN76 240 aaPredicted RBP18.92■□□□□ 0.62
PCDHA9-202ENST00000532602 U2AF1Q01081 240 aaKnown RBP eCLIP18.92■□□□□ 0.62
PCDHA9-202ENST00000532602 TRAK1Q9UPV9 953 aa18.92■□□□□ 0.62
PCDHA9-202ENST00000532602 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.91■□□□□ 0.62
PCDHA9-202ENST00000532602 L3MBTL2Q969R5 705 aa18.91■□□□□ 0.62
PCDHA9-202ENST00000532602 CHMP4AQ9BY43 222 aa18.9■□□□□ 0.62
PCDHA9-202ENST00000532602 APBB1O00213 710 aa18.9■□□□□ 0.62
PCDHA9-202ENST00000532602 GAPVD1Q14C86 1478 aa18.9■□□□□ 0.62
PCDHA9-202ENST00000532602 NAP1L2Q9ULW6 460 aaPredicted RBP18.89■□□□□ 0.62
PCDHA9-202ENST00000532602 AQRO60306 1485 aaKnown RBP eCLIP18.89■□□□□ 0.61
PCDHA9-202ENST00000532602 PTMAP06454 111 aaKnown RBP18.88■□□□□ 0.61
PCDHA9-202ENST00000532602 LTV1Q96GA3 475 aaPredicted RBP18.88■□□□□ 0.61
PCDHA9-202ENST00000532602 NGDNQ8NEJ9 315 aaKnown RBP18.87■□□□□ 0.61
PCDHA9-202ENST00000532602 CALD1Q05682 793 aaKnown RBP18.87■□□□□ 0.61
PCDHA9-202ENST00000532602 CCDC146Q8IYE0 955 aa18.87■□□□□ 0.61
PCDHA9-202ENST00000532602 CFAP44Q96MT7 982 aa18.87■□□□□ 0.61
PCDHA9-202ENST00000532602 PPP4R2Q9NY27 417 aa18.86■□□□□ 0.61
PCDHA9-202ENST00000532602 EIF3AQ14152 1382 aaKnown RBP18.85■□□□□ 0.61
PCDHA9-202ENST00000532602 RSPH4AQ5TD94 716 aa18.84■□□□□ 0.61
PCDHA9-202ENST00000532602 IPO8O15397 1037 aaKnown RBP18.82■□□□□ 0.6
PCDHA9-202ENST00000532602 FAM69CQ0P6D2 419 aa18.81■□□□□ 0.6
PCDHA9-202ENST00000532602 MCCP23508 829 aa18.81■□□□□ 0.6
PCDHA9-202ENST00000532602 HSP90AB1P08238 724 aaKnown RBP18.79■□□□□ 0.6
PCDHA9-202ENST00000532602 GOLGA6L6A8MZA4 724 aa18.78■□□□□ 0.6
PCDHA9-202ENST00000532602 NRDCO43847 1150 aa18.78■□□□□ 0.6
PCDHA9-202ENST00000532602 TERF2IPQ9NYB0 399 aa18.77■□□□□ 0.6
PCDHA9-202ENST00000532602 SPRYD3Q8NCJ5 442 aa18.77■□□□□ 0.6
PCDHA9-202ENST00000532602 TMX4Q9H1E5 349 aaPredicted RBP18.77■□□□□ 0.59
PCDHA9-202ENST00000532602 AMPHP49418 695 aa18.76■□□□□ 0.59
PCDHA9-202ENST00000532602 GOLGA6L4A6NEF3 574 aa18.76■□□□□ 0.59
PCDHA9-202ENST00000532602 IGF1RP08069 1367 aa18.76■□□□□ 0.59
PCDHA9-202ENST00000532602 CCDC144AA2RUR9 1427 aa18.76■□□□□ 0.59
PCDHA9-202ENST00000532602 NESP48681 1621 aa18.76■□□□□ 0.59
PCDHA9-202ENST00000532602 ITPRIPQ8IWB1 547 aa18.76■□□□□ 0.59
PCDHA9-202ENST00000532602 ZNF644Q9H582 1327 aaPredicted RBP18.75■□□□□ 0.59
PCDHA9-202ENST00000532602 CCER2I3L3R5 266 aa18.74■□□□□ 0.59
PCDHA9-202ENST00000532602 HDAC5Q9UQL6 1122 aa18.74■□□□□ 0.59
PCDHA9-202ENST00000532602 RALBP1Q15311 655 aa18.74■□□□□ 0.59
PCDHA9-202ENST00000532602 ST20-MTHFSA0A0A6YYL1 179 aa18.72■□□□□ 0.59
PCDHA9-202ENST00000532602 ISY1Q9ULR0 285 aaKnown RBP18.72■□□□□ 0.59
PCDHA9-202ENST00000532602 MINK1Q8N4C8 1332 aaPredicted RBP18.72■□□□□ 0.59
PCDHA9-202ENST00000532602 DNTTIP2Q5QJE6 756 aaKnown RBP18.71■□□□□ 0.59
PCDHA9-202ENST00000532602 RRP7AQ9Y3A4 280 aaKnown RBP18.71■□□□□ 0.59
PCDHA9-202ENST00000532602 CHMP3Q9Y3E7 222 aa18.71■□□□□ 0.59
PCDHA9-202ENST00000532602 HSCBQ8IWL3 235 aa18.7■□□□□ 0.58
PCDHA9-202ENST00000532602 STK31Q9BXU1 1019 aa18.7■□□□□ 0.58
PCDHA9-202ENST00000532602 PANK3Q9H999 370 aa18.69■□□□□ 0.58
PCDHA9-202ENST00000532602 CC2D2AQ9P2K1 1620 aa18.69■□□□□ 0.58
PCDHA9-202ENST00000532602 KIAA1211Q6ZU35 1233 aa18.69■□□□□ 0.58
PCDHA9-202ENST00000532602 PLCB2Q00722 1185 aa18.68■□□□□ 0.58
PCDHA9-202ENST00000532602 RCAN3Q9UKA8 241 aa18.68■□□□□ 0.58
PCDHA9-202ENST00000532602 SLC4A10Q6U841 1118 aa18.68■□□□□ 0.58
PCDHA9-202ENST00000532602 SMC4Q9NTJ3 1288 aa18.65■□□□□ 0.58
PCDHA9-202ENST00000532602 CLUAP1Q96AJ1 413 aa18.65■□□□□ 0.58
PCDHA9-202ENST00000532602 NCAPD3P42695 1498 aa18.64■□□□□ 0.57
PCDHA9-202ENST00000532602 LMOD3Q0VAK6 560 aa18.63■□□□□ 0.57
PCDHA9-202ENST00000532602 GNL2Q13823 731 aaKnown RBP18.63■□□□□ 0.57
PCDHA9-202ENST00000532602 VGFO15240 615 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms