RNA–Protein interactions for RNA: ENST00000532451.1

SORL1-210, Transcript of sortilin related receptor 1, humanhuman

TSL 1 (best)

Gene SORL1, Length 2,165 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-210ENST00000532451 KDM5BQ9UGL1 1544 aa33.57■■■□□ 2.96
SORL1-210ENST00000532451 DDX10Q13206 875 aaKnown RBP33.56■■■□□ 2.96
SORL1-210ENST00000532451 ZNF644Q9H582 1327 aaPredicted RBP33.56■■■□□ 2.96
SORL1-210ENST00000532451 ADCY10Q96PN6 1610 aa33.55■■■□□ 2.96
SORL1-210ENST00000532451 ITSN2Q9NZM3 1697 aa33.53■■■□□ 2.96
SORL1-210ENST00000532451 MPHOSPH9Q99550 1183 aa33.52■■■□□ 2.96
SORL1-210ENST00000532451 HIRIP3Q9BW71 556 aaPredicted RBP33.5■■■□□ 2.95
SORL1-210ENST00000532451 CAMSAP2Q08AD1 1489 aa33.48■■■□□ 2.95
SORL1-210ENST00000532451 KIF14Q15058 1648 aa33.48■■■□□ 2.95
SORL1-210ENST00000532451 GPATCH8Q9UKJ3 1502 aaKnown RBP33.48■■■□□ 2.95
SORL1-210ENST00000532451 ABCA8O94911 1581 aa33.48■■■□□ 2.95
SORL1-210ENST00000532451 CFDP1Q9UEE9 299 aaPredicted RBP33.45■■■□□ 2.95
SORL1-210ENST00000532451 PELP1Q8IZL8 1130 aaKnown RBP33.37■■■□□ 2.93
SORL1-210ENST00000532451 ADGBQ8N7X0 1667 aa33.36■■■□□ 2.93
SORL1-210ENST00000532451 ATP10BO94823 1461 aa33.36■■■□□ 2.93
SORL1-210ENST00000532451 KCNH8Q96L42 1107 aa33.35■■■□□ 2.93
SORL1-210ENST00000532451 PLEKHD1A6NEE1 506 aa33.34■■■□□ 2.93
SORL1-210ENST00000532451 CROCC2H7BZ55 1655 aa33.33■■■□□ 2.93
SORL1-210ENST00000532451 ADGRL2O95490 1459 aa33.33■■■□□ 2.93
SORL1-210ENST00000532451 ANKRD30BQ9BXX2 1392 aa33.33■■■□□ 2.93
SORL1-210ENST00000532451 NCOA1Q15788 1441 aa33.32■■■□□ 2.92
SORL1-210ENST00000532451 FOXD1Q16676 465 aa33.32■■■□□ 2.92
SORL1-210ENST00000532451 ZNF777Q9ULD5 760 aaPredicted RBP33.3■■■□□ 2.92
SORL1-210ENST00000532451 ABCC10Q5T3U5 1492 aa33.3■■■□□ 2.92
SORL1-210ENST00000532451 CDC42BPAQ5VT25 1732 aa33.27■■■□□ 2.92
SORL1-210ENST00000532451 RPRD2Q5VT52 1461 aaKnown RBP33.27■■■□□ 2.92
SORL1-210ENST00000532451 SLC4A1APQ9BWU0 796 aaKnown RBP33.26■■■□□ 2.91
SORL1-210ENST00000532451 L3MBTL2Q969R5 705 aa33.25■■■□□ 2.91
SORL1-210ENST00000532451 ANP32CO43423 234 aa33.24■■■□□ 2.91
SORL1-210ENST00000532451 PTPRGP23470 1445 aa33.24■■■□□ 2.91
SORL1-210ENST00000532451 PZPP20742 1482 aa33.23■■■□□ 2.91
SORL1-210ENST00000532451 CCER2I3L3R5 266 aa33.22■■■□□ 2.91
SORL1-210ENST00000532451 ANKRD30AQ9BXX3 1397 aa33.21■■■□□ 2.91
SORL1-210ENST00000532451 CHD1O14646 1710 aa33.21■■■□□ 2.91
SORL1-210ENST00000532451 HSPA5P11021 654 aaKnown RBP33.19■■■□□ 2.9
SORL1-210ENST00000532451 TEX14Q8IWB6 1497 aa33.18■■■□□ 2.9
SORL1-210ENST00000532451 SHANK2Q9UPX8 1470 aa33.17■■■□□ 2.9
SORL1-210ENST00000532451 EIF4G2P78344 907 aaKnown RBP eCLIP33.14■■■□□ 2.9
SORL1-210ENST00000532451 SHROOM2Q13796 1616 aa33.1■■■□□ 2.89
SORL1-210ENST00000532451 C9orf84Q5VXU9 1444 aa33.1■■■□□ 2.89
SORL1-210ENST00000532451 ANKRD50Q9ULJ7 1429 aa33.1■■■□□ 2.89
SORL1-210ENST00000532451 KIAA1107Q9UPP5 1409 aa33.08■■■□□ 2.89
SORL1-210ENST00000532451 WASHC2AQ641Q2 1341 aa33.07■■■□□ 2.88
SORL1-210ENST00000532451 NBPF8Q3BBV2 869 aa33.04■■■□□ 2.88
SORL1-210ENST00000532451 ARHGEF5Q12774 1597 aa33.04■■■□□ 2.88
SORL1-210ENST00000532451 TSPY4P0CV99 314 aa33■■■□□ 2.87
SORL1-210ENST00000532451 TSPY10P0CW01 314 aa33■■■□□ 2.87
SORL1-210ENST00000532451 PREX2Q70Z35 1606 aa32.99■■■□□ 2.87
SORL1-210ENST00000532451 MBD5Q9P267 1494 aa32.98■■■□□ 2.87
SORL1-210ENST00000532451 PKD2Q13563 968 aa32.98■■■□□ 2.87
SORL1-210ENST00000532451 SUPT16HQ9Y5B9 1047 aaKnown RBP32.97■■■□□ 2.87
SORL1-210ENST00000532451 CDC42BPBQ9Y5S2 1711 aa32.96■■■□□ 2.87
SORL1-210ENST00000532451 SAMD9LQ8IVG5 1584 aa32.96■■■□□ 2.87
SORL1-210ENST00000532451 HNRNPMP52272 730 aaKnown RBP eCLIP32.96■■■□□ 2.87
SORL1-210ENST00000532451 KDM5DQ9BY66 1539 aa32.95■■■□□ 2.86
SORL1-210ENST00000532451 NUP155O75694 1391 aa32.92■■■□□ 2.86
SORL1-210ENST00000532451 KIF15Q9NS87 1388 aa32.92■■■□□ 2.86
SORL1-210ENST00000532451 CCDC141Q6ZP82 1450 aa32.92■■■□□ 2.86
SORL1-210ENST00000532451 SPATA31E1Q6ZUB1 1445 aa32.9■■■□□ 2.86
SORL1-210ENST00000532451 CNTLNQ9NXG0 1405 aa32.9■■■□□ 2.86
SORL1-210ENST00000532451 ABCC2Q92887 1545 aa32.9■■■□□ 2.86
SORL1-210ENST00000532451 ERCC6L2Q5T890 1561 aa32.9■■■□□ 2.86
SORL1-210ENST00000532451 CCDC7Q96M83 1385 aa32.9■■■□□ 2.86
SORL1-210ENST00000532451 RSPH4AQ5TD94 716 aa32.87■■■□□ 2.85
SORL1-210ENST00000532451 C11orf95C9JLR9 678 aaPredicted RBP32.86■■■□□ 2.85
SORL1-210ENST00000532451 TTC37Q6PGP7 1564 aa32.85■■■□□ 2.85
SORL1-210ENST00000532451 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.84■■■□□ 2.85
SORL1-210ENST00000532451 ARHGAP5Q13017 1502 aa32.8■■■□□ 2.84
SORL1-210ENST00000532451 POLR1AO95602 1720 aaPredicted RBP32.8■■■□□ 2.84
SORL1-210ENST00000532451 SYCP2Q9BX26 1530 aa32.79■■■□□ 2.84
SORL1-210ENST00000532451 CLASP1Q7Z460 1538 aa32.78■■■□□ 2.84
SORL1-210ENST00000532451 MAST1Q9Y2H9 1570 aa32.77■■■□□ 2.84
SORL1-210ENST00000532451 KIF7Q2M1P5 1343 aa32.74■■■□□ 2.83
SORL1-210ENST00000532451 MYO5CQ9NQX4 1742 aa32.74■■■□□ 2.83
SORL1-210ENST00000532451 UHRF1BP1Q6BDS2 1440 aa32.73■■■□□ 2.83
SORL1-210ENST00000532451 ARHGEF12Q9NZN5 1544 aa32.72■■■□□ 2.83
SORL1-210ENST00000532451 PLEKHH2Q8IVE3 1493 aa32.71■■■□□ 2.83
SORL1-210ENST00000532451 FAM135AQ9P2D6 1515 aa32.7■■■□□ 2.82
SORL1-210ENST00000532451 UHRF1BP1LA0JNW5 1464 aa32.68■■■□□ 2.82
SORL1-210ENST00000532451 ZNF326Q5BKZ1 582 aaKnown RBP32.68■■■□□ 2.82
SORL1-210ENST00000532451 USP47Q96K76 1375 aa32.68■■■□□ 2.82
SORL1-210ENST00000532451 ZCCHC11Q5TAX3 1644 aaKnown RBP32.67■■■□□ 2.82
SORL1-210ENST00000532451 RALGAPBQ86X10 1494 aa32.66■■■□□ 2.82
SORL1-210ENST00000532451 PRKRIP1Q9H875 184 aaPredicted RBP32.65■■■□□ 2.82
SORL1-210ENST00000532451 PLXNC1O60486 1568 aa32.64■■■□□ 2.82
SORL1-210ENST00000532451 KDM5CP41229 1560 aa32.64■■■□□ 2.82
SORL1-210ENST00000532451 UNC13BO14795 1591 aa32.63■■■□□ 2.81
SORL1-210ENST00000532451 PLCH2O75038 1416 aa32.6■■■□□ 2.81
SORL1-210ENST00000532451 BCORL1Q5H9F3 1711 aa32.59■■■□□ 2.81
SORL1-210ENST00000532451 HNRNPUQ00839 825 aaKnown RBP eCLIP32.57■■■□□ 2.8
SORL1-210ENST00000532451 FKBP8Q14318 412 aa32.56■■■□□ 2.8
SORL1-210ENST00000532451 ARID4BQ4LE39 1312 aaPredicted RBP32.54■■■□□ 2.8
SORL1-210ENST00000532451 DUOX2Q9NRD8 1548 aa32.53■■■□□ 2.8
SORL1-210ENST00000532451 CCDC184Q52MB2 194 aa32.53■■■□□ 2.8
SORL1-210ENST00000532451 EFCAB2Q5VUJ9 269 aa32.52■■■□□ 2.8
SORL1-210ENST00000532451 IQGAP3Q86VI3 1631 aa32.51■■■□□ 2.79
SORL1-210ENST00000532451 NEFLP07196 543 aa32.51■■■□□ 2.79
SORL1-210ENST00000532451 CARD11Q9BXL7 1154 aa32.51■■■□□ 2.79
SORL1-210ENST00000532451 DCAF11Q8TEB1 546 aa32.5■■■□□ 2.79
SORL1-210ENST00000532451 CCDC144AA2RUR9 1427 aa32.5■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms