RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 TRIM52Q96A61 297 aa22.06■■□□□ 1.12
SRPRA-206ENST00000532259 DNMT1P26358 1616 aaKnown RBP22.05■■□□□ 1.12
SRPRA-206ENST00000532259 ABCC10Q5T3U5 1492 aa22.04■■□□□ 1.12
SRPRA-206ENST00000532259 GCC2Q8IWJ2 1684 aa22.04■■□□□ 1.12
SRPRA-206ENST00000532259 ITSN2Q9NZM3 1697 aa22.01■■□□□ 1.11
SRPRA-206ENST00000532259 CDC42BPAQ5VT25 1732 aa22.01■■□□□ 1.11
SRPRA-206ENST00000532259 DENND4BO75064 1496 aaPredicted RBP22■■□□□ 1.11
SRPRA-206ENST00000532259 AKNAQ7Z591 1439 aa22■■□□□ 1.11
SRPRA-206ENST00000532259 FOXD1Q16676 465 aa22■■□□□ 1.11
SRPRA-206ENST00000532259 ROCK1Q13464 1354 aa21.96■■□□□ 1.11
SRPRA-206ENST00000532259 KCNH8Q96L42 1107 aa21.96■■□□□ 1.11
SRPRA-206ENST00000532259 ABCC2Q92887 1545 aa21.96■■□□□ 1.11
SRPRA-206ENST00000532259 MIER1Q8N108 512 aa21.96■■□□□ 1.11
SRPRA-206ENST00000532259 HNRNPMP52272 730 aaKnown RBP eCLIP21.95■■□□□ 1.1
SRPRA-206ENST00000532259 MPHOSPH9Q99550 1183 aa21.94■■□□□ 1.1
SRPRA-206ENST00000532259 OSCARQ8IYS5 282 aa21.93■■□□□ 1.1
SRPRA-206ENST00000532259 NCOA1Q15788 1441 aa21.92■■□□□ 1.1
SRPRA-206ENST00000532259 PPP1R15AO75807 674 aaPredicted RBP21.91■■□□□ 1.1
SRPRA-206ENST00000532259 HIRIP3Q9BW71 556 aaPredicted RBP21.89■■□□□ 1.09
SRPRA-206ENST00000532259 TONSLQ96HA7 1378 aa21.89■■□□□ 1.09
SRPRA-206ENST00000532259 TTC37Q6PGP7 1564 aa21.88■■□□□ 1.09
SRPRA-206ENST00000532259 CDC42BPBQ9Y5S2 1711 aa21.87■■□□□ 1.09
SRPRA-206ENST00000532259 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.86■■□□□ 1.092e-7■■□□□ 12.7
SRPRA-206ENST00000532259 CROCC2H7BZ55 1655 aa21.86■■□□□ 1.09
SRPRA-206ENST00000532259 YTHDC1Q96MU7 727 aaKnown RBP21.85■■□□□ 1.09
SRPRA-206ENST00000532259 TIMELESSQ9UNS1 1208 aa21.85■■□□□ 1.09
SRPRA-206ENST00000532259 ZCCHC11Q5TAX3 1644 aaKnown RBP21.84■■□□□ 1.09
SRPRA-206ENST00000532259 SAMD9LQ8IVG5 1584 aa21.84■■□□□ 1.09
SRPRA-206ENST00000532259 SLC4A1APQ9BWU0 796 aaKnown RBP21.83■■□□□ 1.09
SRPRA-206ENST00000532259 C9orf84Q5VXU9 1444 aa21.83■■□□□ 1.09
SRPRA-206ENST00000532259 MBD5Q9P267 1494 aa21.82■■□□□ 1.08
SRPRA-206ENST00000532259 ANKRD30AQ9BXX3 1397 aa21.82■■□□□ 1.08
SRPRA-206ENST00000532259 ADGRL2O95490 1459 aa21.82■■□□□ 1.08
SRPRA-206ENST00000532259 PREX2Q70Z35 1606 aa21.82■■□□□ 1.08
SRPRA-206ENST00000532259 ADGBQ8N7X0 1667 aa21.82■■□□□ 1.08
SRPRA-206ENST00000532259 TSPY4P0CV99 314 aa21.81■■□□□ 1.08
SRPRA-206ENST00000532259 TSPY10P0CW01 314 aa21.81■■□□□ 1.08
SRPRA-206ENST00000532259 KDM5BQ9UGL1 1544 aa21.8■■□□□ 1.08
SRPRA-206ENST00000532259 ARHGAP5Q13017 1502 aa21.79■■□□□ 1.08
SRPRA-206ENST00000532259 UHRF1BP1LA0JNW5 1464 aa21.79■■□□□ 1.08
SRPRA-206ENST00000532259 ANKRD50Q9ULJ7 1429 aa21.78■■□□□ 1.08
SRPRA-206ENST00000532259 PZPP20742 1482 aa21.77■■□□□ 1.07
SRPRA-206ENST00000532259 SYCP2Q9BX26 1530 aa21.76■■□□□ 1.07
SRPRA-206ENST00000532259 ANKRD30BQ9BXX2 1392 aa21.75■■□□□ 1.07
SRPRA-206ENST00000532259 SHANK2Q9UPX8 1470 aa21.74■■□□□ 1.07
SRPRA-206ENST00000532259 KIF15Q9NS87 1388 aa21.73■■□□□ 1.07
SRPRA-206ENST00000532259 CCDC141Q6ZP82 1450 aa21.72■■□□□ 1.07
SRPRA-206ENST00000532259 ARHGEF5Q12774 1597 aa21.72■■□□□ 1.07
SRPRA-206ENST00000532259 L3MBTL2Q969R5 705 aa21.72■■□□□ 1.07
SRPRA-206ENST00000532259 MYO5CQ9NQX4 1742 aa21.71■■□□□ 1.07
SRPRA-206ENST00000532259 ARHGEF12Q9NZN5 1544 aa21.7■■□□□ 1.06
SRPRA-206ENST00000532259 PKD2Q13563 968 aa21.7■■□□□ 1.06
SRPRA-206ENST00000532259 NUP155O75694 1391 aa21.68■■□□□ 1.06
SRPRA-206ENST00000532259 DDX10Q13206 875 aaKnown RBP21.68■■□□□ 1.06
SRPRA-206ENST00000532259 PLCH2O75038 1416 aa21.68■■□□□ 1.06
SRPRA-206ENST00000532259 RPRD2Q5VT52 1461 aaKnown RBP21.64■■□□□ 1.06
SRPRA-206ENST00000532259 EFCAB2Q5VUJ9 269 aa21.64■■□□□ 1.05
SRPRA-206ENST00000532259 RSPH4AQ5TD94 716 aa21.63■■□□□ 1.05
SRPRA-206ENST00000532259 WDR7Q9Y4E6 1490 aa21.62■■□□□ 1.05
SRPRA-206ENST00000532259 ACIN1Q9UKV3 1341 aaKnown RBP21.61■■□□□ 1.05
SRPRA-206ENST00000532259 KIAA1107Q9UPP5 1409 aa21.61■■□□□ 1.05
SRPRA-206ENST00000532259 CENPBP07199 599 aaPredicted RBP21.61■■□□□ 1.05
SRPRA-206ENST00000532259 TRAPPC8Q9Y2L5 1435 aa21.6■■□□□ 1.05
SRPRA-206ENST00000532259 NBPF8Q3BBV2 869 aa21.6■■□□□ 1.05
SRPRA-206ENST00000532259 SCAF1Q9H7N4 1312 aaKnown RBP21.59■■□□□ 1.05
SRPRA-206ENST00000532259 AFAP1Q8N556 730 aa21.59■■□□□ 1.05
SRPRA-206ENST00000532259 RIMBP3CA6NJZ7 1639 aa21.59■■□□□ 1.05
SRPRA-206ENST00000532259 RIMBP3BA6NNM3 1639 aa21.59■■□□□ 1.05
SRPRA-206ENST00000532259 RIMBP3Q9UFD9 1639 aa21.59■■□□□ 1.05
SRPRA-206ENST00000532259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.58■■□□□ 1.056e-7■■□□□ 14.4
SRPRA-206ENST00000532259 TEX14Q8IWB6 1497 aa21.58■■□□□ 1.05
SRPRA-206ENST00000532259 ASXL2Q76L83 1435 aa21.58■■□□□ 1.05
SRPRA-206ENST00000532259 PLEKHH2Q8IVE3 1493 aa21.55■■□□□ 1.04
SRPRA-206ENST00000532259 ABCC1P33527 1531 aa21.55■■□□□ 1.04
SRPRA-206ENST00000532259 MAST1Q9Y2H9 1570 aa21.53■■□□□ 1.04
SRPRA-206ENST00000532259 HSPA5P11021 654 aaKnown RBP21.53■■□□□ 1.04
SRPRA-206ENST00000532259 ZNF326Q5BKZ1 582 aaKnown RBP21.52■■□□□ 1.04
SRPRA-206ENST00000532259 KDM5DQ9BY66 1539 aa21.5■■□□□ 1.03
SRPRA-206ENST00000532259 FANCAO15360 1455 aa21.49■■□□□ 1.03
SRPRA-206ENST00000532259 NPM1P06748 294 aaKnown RBP eCLIP21.49■■□□□ 1.03
SRPRA-206ENST00000532259 FAM135AQ9P2D6 1515 aa21.49■■□□□ 1.03
SRPRA-206ENST00000532259 SPAG9O60271 1321 aaKnown RBP21.47■■□□□ 1.03
SRPRA-206ENST00000532259 PLXNC1O60486 1568 aa21.47■■□□□ 1.03
SRPRA-206ENST00000532259 ABCA9Q8IUA7 1624 aa21.47■■□□□ 1.03
SRPRA-206ENST00000532259 DNAJC5Q9H3Z4 198 aa21.46■■□□□ 1.03
SRPRA-206ENST00000532259 EIF4G2P78344 907 aaKnown RBP eCLIP21.44■■□□□ 1.02
SRPRA-206ENST00000532259 ARAP3Q8WWN8 1544 aa21.43■■□□□ 1.02
SRPRA-206ENST00000532259 DUOX2Q9NRD8 1548 aa21.43■■□□□ 1.02
SRPRA-206ENST00000532259 MYT1LQ9UL68 1186 aa21.43■■□□□ 1.02
SRPRA-206ENST00000532259 SCAPERQ9BY12 1400 aa21.42■■□□□ 1.02
SRPRA-206ENST00000532259 C11orf95C9JLR9 678 aaPredicted RBP21.41■■□□□ 1.02
SRPRA-206ENST00000532259 KDM2AQ9Y2K7 1162 aa21.41■■□□□ 1.02
SRPRA-206ENST00000532259 WASHC2AQ641Q2 1341 aa21.41■■□□□ 1.02
SRPRA-206ENST00000532259 UNC13BO14795 1591 aa21.41■■□□□ 1.02
SRPRA-206ENST00000532259 ADGRL1O94910 1474 aa21.41■■□□□ 1.02
SRPRA-206ENST00000532259 CYB5RLQ6IPT4 315 aa21.4■■□□□ 1.02
SRPRA-206ENST00000532259 GTF3C3Q9Y5Q9 886 aa21.4■■□□□ 1.02
SRPRA-206ENST00000532259 ZFYVE16Q7Z3T8 1539 aa21.4■■□□□ 1.02
SRPRA-206ENST00000532259 PLA2R1Q13018 1463 aa21.38■■□□□ 1.01
SRPRA-206ENST00000532259 ERBINQ96RT1 1412 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms