RNA–Protein interactions for RNA: ENST00000532157.5

POLB-217, Transcript of DNA polymerase beta, humanhuman

TSL 3

Gene POLB, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-217ENST00000532157 CSRNP3Q8WYN3 585 aa17.78■□□□□ 0.44
POLB-217ENST00000532157 KIF27Q86VH2 1401 aa17.74■□□□□ 0.43
POLB-217ENST00000532157 KCNH8Q96L42 1107 aa17.74■□□□□ 0.43
POLB-217ENST00000532157 CARMIL1Q5VZK9 1371 aa17.72■□□□□ 0.43
POLB-217ENST00000532157 EHMT2Q96KQ7 1210 aa17.71■□□□□ 0.43
POLB-217ENST00000532157 RIMS1Q86UR5 1692 aaKnown RBP17.7■□□□□ 0.42
POLB-217ENST00000532157 UGGT2Q9NYU1 1516 aa17.68■□□□□ 0.42
POLB-217ENST00000532157 KIAA0556O60303 1618 aa17.67■□□□□ 0.42
POLB-217ENST00000532157 ARID4BQ4LE39 1312 aaPredicted RBP17.67■□□□□ 0.42
POLB-217ENST00000532157 RAPGEF3O95398 923 aa17.65■□□□□ 0.42
POLB-217ENST00000532157 PHLDB1Q86UU1 1377 aa17.64■□□□□ 0.41
POLB-217ENST00000532157 AKT1S1Q96B36 256 aa17.63■□□□□ 0.41
POLB-217ENST00000532157 FRMPD1Q5SYB0 1578 aa17.6■□□□□ 0.41
POLB-217ENST00000532157 ABCA8O94911 1581 aa17.58■□□□□ 0.41
POLB-217ENST00000532157 CHRDL2Q6WN34 429 aa17.56■□□□□ 0.4
POLB-217ENST00000532157 ABCA9Q8IUA7 1624 aa17.54■□□□□ 0.4
POLB-217ENST00000532157 NEO1Q92859 1461 aa17.54■□□□□ 0.4
POLB-217ENST00000532157 ARHGEF40Q8TER5 1519 aa17.53■□□□□ 0.4
POLB-217ENST00000532157 STRCQ7RTU9 1775 aa17.53■□□□□ 0.4
POLB-217ENST00000532157 YEATS2Q9ULM3 1422 aa17.52■□□□□ 0.4
POLB-217ENST00000532157 MKRN4PQ13434 485 aaPredicted RBP17.49■□□□□ 0.39
POLB-217ENST00000532157 REM2Q8IYK8 340 aaPredicted RBP17.49■□□□□ 0.39
POLB-217ENST00000532157 POGZQ7Z3K3 1410 aa17.47■□□□□ 0.39
POLB-217ENST00000532157 SIGLEC1Q9BZZ2 1709 aa17.47■□□□□ 0.39
POLB-217ENST00000532157 TTC37Q6PGP7 1564 aa17.47■□□□□ 0.39
POLB-217ENST00000532157 PREX1Q8TCU6 1659 aa17.47■□□□□ 0.39
POLB-217ENST00000532157 FANCAO15360 1455 aa17.46■□□□□ 0.39
POLB-217ENST00000532157 RAPGEF2Q9Y4G8 1499 aa17.45■□□□□ 0.38
POLB-217ENST00000532157 RICTORQ6R327 1708 aa17.45■□□□□ 0.38
POLB-217ENST00000532157 FER1L4A9Z1Z3 1794 aa17.45■□□□□ 0.38
POLB-217ENST00000532157 ATP10BO94823 1461 aa17.44■□□□□ 0.38
POLB-217ENST00000532157 GOLGA3Q08378 1498 aa17.43■□□□□ 0.38
POLB-217ENST00000532157 LTBP4Q8N2S1 1624 aa17.42■□□□□ 0.38
POLB-217ENST00000532157 IQSEC2Q5JU85 1478 aa17.42■□□□□ 0.38
POLB-217ENST00000532157 AKNAQ7Z591 1439 aa17.41■□□□□ 0.38
POLB-217ENST00000532157 SPDYE2BA6NHP3 402 aa17.41■□□□□ 0.38
POLB-217ENST00000532157 ARID3CA6NKF2 412 aa17.41■□□□□ 0.38
POLB-217ENST00000532157 SPDYE6P0CI01 402 aa17.41■□□□□ 0.38
POLB-217ENST00000532157 SPDYE2Q495Y8 402 aa17.41■□□□□ 0.38
POLB-217ENST00000532157 FHOD3Q2V2M9 1422 aa17.4■□□□□ 0.38
POLB-217ENST00000532157 DENND4BO75064 1496 aaPredicted RBP17.4■□□□□ 0.38
POLB-217ENST00000532157 PTPRTO14522 1441 aa17.39■□□□□ 0.38
POLB-217ENST00000532157 MLECQ14165 292 aa17.38■□□□□ 0.37
POLB-217ENST00000532157 CTTNBP2Q8WZ74 1663 aa17.38■□□□□ 0.37
POLB-217ENST00000532157 ZMYM4Q5VZL5 1548 aa17.37■□□□□ 0.37
POLB-217ENST00000532157 ZFYVE16Q7Z3T8 1539 aa17.35■□□□□ 0.37
POLB-217ENST00000532157 EFCAB5A4FU69 1503 aa17.34■□□□□ 0.37
POLB-217ENST00000532157 CEBPAP49715 358 aaPredicted RBP17.34■□□□□ 0.37
POLB-217ENST00000532157 ARHGEF12Q9NZN5 1544 aa17.34■□□□□ 0.37
POLB-217ENST00000532157 SETD1BQ9UPS6 1966 aaKnown RBP17.34■□□□□ 0.37
POLB-217ENST00000532157 UHRF1BP1Q6BDS2 1440 aa17.32■□□□□ 0.36
POLB-217ENST00000532157 MAGI2Q86UL8 1455 aa17.31■□□□□ 0.36
POLB-217ENST00000532157 PITPNM1O00562 1244 aa17.3■□□□□ 0.36
POLB-217ENST00000532157 ZNF692Q9BU19 519 aaPredicted RBP17.29■□□□□ 0.36
POLB-217ENST00000532157 MED1Q15648 1581 aaPredicted RBP17.27■□□□□ 0.35
POLB-217ENST00000532157 CFAP74Q9C0B2 1584 aa17.27■□□□□ 0.35
POLB-217ENST00000532157 HECW1Q76N89 1606 aa17.26■□□□□ 0.35
POLB-217ENST00000532157 UBAP1LF5GYI3 381 aa17.25■□□□□ 0.35
POLB-217ENST00000532157 FAM9AQ8IZU1 332 aaPredicted RBP17.23■□□□□ 0.35
POLB-217ENST00000532157 ATP10AO60312 1499 aa17.21■□□□□ 0.35
POLB-217ENST00000532157 P3H3Q8IVL6 736 aa17.2■□□□□ 0.34
POLB-217ENST00000532157 RAPGEF6Q8TEU7 1601 aa17.2■□□□□ 0.34
POLB-217ENST00000532157 NCOA1Q15788 1441 aa17.2■□□□□ 0.34
POLB-217ENST00000532157 C9orf84Q5VXU9 1444 aa17.19■□□□□ 0.34
POLB-217ENST00000532157 PIP4P2Q8N4L2 257 aa17.18■□□□□ 0.34
POLB-217ENST00000532157 SSUH2Q9Y2M2 353 aa17.18■□□□□ 0.34
POLB-217ENST00000532157 C3P01024 1663 aa17.16■□□□□ 0.34
POLB-217ENST00000532157 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.16■□□□□ 0.34
POLB-217ENST00000532157 NUP153P49790 1475 aaKnown RBP17.15■□□□□ 0.34
POLB-217ENST00000532157 ZNF335Q9H4Z2 1342 aaPredicted RBP17.15■□□□□ 0.34
POLB-217ENST00000532157 HSPA1LP34931 641 aa17.14■□□□□ 0.33
POLB-217ENST00000532157 SCAPERQ9BY12 1400 aa17.13■□□□□ 0.33
POLB-217ENST00000532157 PLEKHD1A6NEE1 506 aa17.12■□□□□ 0.33
POLB-217ENST00000532157 TRAPPC8Q9Y2L5 1435 aa17.12■□□□□ 0.33
POLB-217ENST00000532157 CLEC11AQ9Y240 323 aa17.11■□□□□ 0.33
POLB-217ENST00000532157 CAMSAP1Q5T5Y3 1602 aa17.1■□□□□ 0.33
POLB-217ENST00000532157 SAMD9Q5K651 1589 aa17.09■□□□□ 0.33
POLB-217ENST00000532157 FXR2P51116 673 aaKnown RBP eCLIP17.08■□□□□ 0.32
POLB-217ENST00000532157 SPDYE1Q8NFV5 336 aaPredicted RBP17.08■□□□□ 0.32
POLB-217ENST00000532157 PRXQ9BXM0 1461 aa17.06■□□□□ 0.32
POLB-217ENST00000532157 NCKAP5LQ9HCH0 1330 aa17.06■□□□□ 0.32
POLB-217ENST00000532157 PLCH2O75038 1416 aa17.04■□□□□ 0.32
POLB-217ENST00000532157 PIP4K2BP78356 416 aa17.03■□□□□ 0.32
POLB-217ENST00000532157 REREQ9P2R6 1566 aa17.02■□□□□ 0.32
POLB-217ENST00000532157 DIP2CQ9Y2E4 1556 aa17■□□□□ 0.31
POLB-217ENST00000532157 ZNF518AQ6AHZ1 1483 aa16.99■□□□□ 0.31
POLB-217ENST00000532157 KDM5CP41229 1560 aa16.99■□□□□ 0.31
POLB-217ENST00000532157 ESF1Q9H501 851 aaKnown RBP16.99■□□□□ 0.31
POLB-217ENST00000532157 AGLP35573 1532 aa16.99■□□□□ 0.31
POLB-217ENST00000532157 TOM1O60784 492 aa16.98■□□□□ 0.31
POLB-217ENST00000532157 PKD2Q13563 968 aa16.97■□□□□ 0.31
POLB-217ENST00000532157 NPATQ14207 1427 aa16.96■□□□□ 0.31
POLB-217ENST00000532157 EFCAB2Q5VUJ9 269 aa16.96■□□□□ 0.31
POLB-217ENST00000532157 AFAP1Q8N556 730 aa16.96■□□□□ 0.31
POLB-217ENST00000532157 PLA2R1Q13018 1463 aa16.96■□□□□ 0.31
POLB-217ENST00000532157 TCOF1Q13428 1488 aaKnown RBP16.96■□□□□ 0.31
POLB-217ENST00000532157 CNTLNQ9NXG0 1405 aa16.96■□□□□ 0.3
POLB-217ENST00000532157 ABCA6Q8N139 1617 aa16.95■□□□□ 0.3
POLB-217ENST00000532157 MYO5CQ9NQX4 1742 aa16.93■□□□□ 0.3
POLB-217ENST00000532157 RGS17Q9UGC6 210 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms