RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 ABCC5O15440 1437 aa16.23■□□□□ 0.19
SRPRA-205ENST00000531104 DAPK1P53355 1430 aa16.23■□□□□ 0.19
SRPRA-205ENST00000531104 GCC2Q8IWJ2 1684 aa16.22■□□□□ 0.19
SRPRA-205ENST00000531104 ROCK1Q13464 1354 aa16.21■□□□□ 0.19
SRPRA-205ENST00000531104 PREX2Q70Z35 1606 aa16.2■□□□□ 0.18
SRPRA-205ENST00000531104 CFDP1Q9UEE9 299 aaPredicted RBP16.2■□□□□ 0.18
SRPRA-205ENST00000531104 ZNF644Q9H582 1327 aaPredicted RBP16.19■□□□□ 0.18
SRPRA-205ENST00000531104 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.19■□□□□ 0.18
SRPRA-205ENST00000531104 CROCC2H7BZ55 1655 aa16.18■□□□□ 0.18
SRPRA-205ENST00000531104 TTC37Q6PGP7 1564 aa16.17■□□□□ 0.18
SRPRA-205ENST00000531104 CDC42BPBQ9Y5S2 1711 aa16.17■□□□□ 0.18
SRPRA-205ENST00000531104 MAPKBP1O60336 1514 aa16.17■□□□□ 0.18
SRPRA-205ENST00000531104 ADGRL2O95490 1459 aa16.16■□□□□ 0.18
SRPRA-205ENST00000531104 ARHGEF5Q12774 1597 aa16.15■□□□□ 0.18
SRPRA-205ENST00000531104 SAMD9LQ8IVG5 1584 aa16.13■□□□□ 0.17
SRPRA-205ENST00000531104 SHANK2Q9UPX8 1470 aa16.13■□□□□ 0.17
SRPRA-205ENST00000531104 ADGBQ8N7X0 1667 aa16.13■□□□□ 0.17
SRPRA-205ENST00000531104 MBD5Q9P267 1494 aa16.12■□□□□ 0.17
SRPRA-205ENST00000531104 MYO5CQ9NQX4 1742 aa16.12■□□□□ 0.17
SRPRA-205ENST00000531104 WDR7Q9Y4E6 1490 aa16.11■□□□□ 0.17
SRPRA-205ENST00000531104 KDM6BO15054 1643 aa16.11■□□□□ 0.17
SRPRA-205ENST00000531104 ARAP3Q8WWN8 1544 aa16.1■□□□□ 0.17
SRPRA-205ENST00000531104 CHIC2Q9UKJ5 165 aa16.1■□□□□ 0.17
SRPRA-205ENST00000531104 ACIN1Q9UKV3 1341 aaKnown RBP16.1■□□□□ 0.17
SRPRA-205ENST00000531104 PLCH2O75038 1416 aa16.1■□□□□ 0.17
SRPRA-205ENST00000531104 RRP7BPQ9NSQ0 103 aa16.09■□□□□ 0.17
SRPRA-205ENST00000531104 NCOA1Q15788 1441 aa16.09■□□□□ 0.17
SRPRA-205ENST00000531104 PLPPR3Q6T4P5 718 aa16.08■□□□□ 0.16
SRPRA-205ENST00000531104 KIAA1107Q9UPP5 1409 aa16.08■□□□□ 0.16
SRPRA-205ENST00000531104 ZNF777Q9ULD5 760 aaPredicted RBP16.07■□□□□ 0.16
SRPRA-205ENST00000531104 PLEKHH2Q8IVE3 1493 aa16.07■□□□□ 0.16
SRPRA-205ENST00000531104 ABCA9Q8IUA7 1624 aa16.06■□□□□ 0.16
SRPRA-205ENST00000531104 ARHGAP5Q13017 1502 aa16.06■□□□□ 0.16
SRPRA-205ENST00000531104 RSPH4AQ5TD94 716 aa16.06■□□□□ 0.16
SRPRA-205ENST00000531104 MAST1Q9Y2H9 1570 aa16.05■□□□□ 0.16
SRPRA-205ENST00000531104 ASXL2Q76L83 1435 aa16.05■□□□□ 0.16
SRPRA-205ENST00000531104 CCDC141Q6ZP82 1450 aa16.04■□□□□ 0.16
SRPRA-205ENST00000531104 KCNH8Q96L42 1107 aa16.04■□□□□ 0.16
SRPRA-205ENST00000531104 C9orf84Q5VXU9 1444 aa16.03■□□□□ 0.16
SRPRA-205ENST00000531104 ANKRD30AQ9BXX3 1397 aa16.03■□□□□ 0.16
SRPRA-205ENST00000531104 DENND4BO75064 1496 aaPredicted RBP16.03■□□□□ 0.16
SRPRA-205ENST00000531104 SYCP2Q9BX26 1530 aa16.02■□□□□ 0.15
SRPRA-205ENST00000531104 ABCC1P33527 1531 aa16.01■□□□□ 0.15
SRPRA-205ENST00000531104 HNRNPMP52272 730 aaKnown RBP eCLIP16.01■□□□□ 0.15
SRPRA-205ENST00000531104 ARHGEF12Q9NZN5 1544 aa16■□□□□ 0.15
SRPRA-205ENST00000531104 RIMBP3CA6NJZ7 1639 aa16■□□□□ 0.15
SRPRA-205ENST00000531104 RIMBP3BA6NNM3 1639 aa16■□□□□ 0.15
SRPRA-205ENST00000531104 RIMBP3Q9UFD9 1639 aa16■□□□□ 0.15
SRPRA-205ENST00000531104 EFCAB2Q5VUJ9 269 aa15.99■□□□□ 0.15
SRPRA-205ENST00000531104 NPM1P06748 294 aaKnown RBP eCLIP15.97■□□□□ 0.15
SRPRA-205ENST00000531104 TSPY4P0CV99 314 aa15.97■□□□□ 0.15
SRPRA-205ENST00000531104 TSPY10P0CW01 314 aa15.97■□□□□ 0.15
SRPRA-205ENST00000531104 TIMELESSQ9UNS1 1208 aa15.97■□□□□ 0.15
SRPRA-205ENST00000531104 PLXNC1O60486 1568 aa15.96■□□□□ 0.15
SRPRA-205ENST00000531104 ANKRD50Q9ULJ7 1429 aa15.95■□□□□ 0.14
SRPRA-205ENST00000531104 PZPP20742 1482 aa15.94■□□□□ 0.14
SRPRA-205ENST00000531104 KDM5DQ9BY66 1539 aa15.94■□□□□ 0.14
SRPRA-205ENST00000531104 KIF15Q9NS87 1388 aa15.93■□□□□ 0.14
SRPRA-205ENST00000531104 SIN3AQ96ST3 1273 aa15.93■□□□□ 0.14
SRPRA-205ENST00000531104 MPHOSPH9Q99550 1183 aa15.93■□□□□ 0.14
SRPRA-205ENST00000531104 FANCAO15360 1455 aa15.91■□□□□ 0.14
SRPRA-205ENST00000531104 TRIM52Q96A61 297 aa15.91■□□□□ 0.14
SRPRA-205ENST00000531104 TRAPPC8Q9Y2L5 1435 aa15.91■□□□□ 0.14
SRPRA-205ENST00000531104 RTEL1-TNFRSF6BF6WH68 1400 aa15.9■□□□□ 0.14
SRPRA-205ENST00000531104 DUOX2Q9NRD8 1548 aa15.88■□□□□ 0.13
SRPRA-205ENST00000531104 ANKRD30BQ9BXX2 1392 aa15.87■□□□□ 0.13
SRPRA-205ENST00000531104 ZNF316A6NFI3 1004 aaPredicted RBP15.87■□□□□ 0.13
SRPRA-205ENST00000531104 GLI2P10070 1586 aa15.87■□□□□ 0.13
SRPRA-205ENST00000531104 CFAP74Q9C0B2 1584 aa15.87■□□□□ 0.13
SRPRA-205ENST00000531104 UNC13BO14795 1591 aa15.86■□□□□ 0.13
SRPRA-205ENST00000531104 CD109Q6YHK3 1445 aa15.85■□□□□ 0.13
SRPRA-205ENST00000531104 ZFYVE16Q7Z3T8 1539 aa15.85■□□□□ 0.13
SRPRA-205ENST00000531104 INO80Q9ULG1 1556 aaPredicted RBP15.85■□□□□ 0.13
SRPRA-205ENST00000531104 NEUROD1Q13562 356 aa15.85■□□□□ 0.13
SRPRA-205ENST00000531104 CYB5RLQ6IPT4 315 aa15.85■□□□□ 0.13
SRPRA-205ENST00000531104 ADGRL1O94910 1474 aa15.84■□□□□ 0.13
SRPRA-205ENST00000531104 ERBINQ96RT1 1412 aa15.84■□□□□ 0.13
SRPRA-205ENST00000531104 PPP1R15AO75807 674 aaPredicted RBP15.83■□□□□ 0.12
SRPRA-205ENST00000531104 SCAPERQ9BY12 1400 aa15.83■□□□□ 0.12
SRPRA-205ENST00000531104 MAGI2Q86UL8 1455 aa15.83■□□□□ 0.12
SRPRA-205ENST00000531104 MAP3K4Q9Y6R4 1608 aa15.83■□□□□ 0.12
SRPRA-205ENST00000531104 SLC4A1APQ9BWU0 796 aaKnown RBP15.82■□□□□ 0.12
SRPRA-205ENST00000531104 ATP7AQ04656 1500 aa15.8■□□□□ 0.12
SRPRA-205ENST00000531104 RPRD2Q5VT52 1461 aaKnown RBP15.8■□□□□ 0.12
SRPRA-205ENST00000531104 NEO1Q92859 1461 aa15.8■□□□□ 0.12
SRPRA-205ENST00000531104 NUP155O75694 1391 aa15.8■□□□□ 0.12
SRPRA-205ENST00000531104 SPAG9O60271 1321 aaKnown RBP15.8■□□□□ 0.12
SRPRA-205ENST00000531104 AFAP1Q8N556 730 aa15.8■□□□□ 0.12
SRPRA-205ENST00000531104 TONSLQ96HA7 1378 aa15.79■□□□□ 0.12
SRPRA-205ENST00000531104 KDM5CP41229 1560 aa15.79■□□□□ 0.12
SRPRA-205ENST00000531104 FAM135AQ9P2D6 1515 aa15.78■□□□□ 0.12
SRPRA-205ENST00000531104 FOXD1Q16676 465 aa15.78■□□□□ 0.12
SRPRA-205ENST00000531104 IQGAP3Q86VI3 1631 aa15.78■□□□□ 0.12
SRPRA-205ENST00000531104 ZNF518AQ6AHZ1 1483 aa15.77■□□□□ 0.11
SRPRA-205ENST00000531104 POGZQ7Z3K3 1410 aa15.77■□□□□ 0.11
SRPRA-205ENST00000531104 DIP2BQ9P265 1576 aa15.76■□□□□ 0.11
SRPRA-205ENST00000531104 PKD2Q13563 968 aa15.76■□□□□ 0.11
SRPRA-205ENST00000531104 KIDINS220Q9ULH0 1771 aa15.75■□□□□ 0.11
SRPRA-205ENST00000531104 DEPDC5O75140 1603 aa15.75■□□□□ 0.11
SRPRA-205ENST00000531104 TEX14Q8IWB6 1497 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms