RNA–Protein interactions for RNA: ENST00000530861.5

BDNF-215, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-215ENST00000530861 CARMIL2Q6F5E8 1435 aa17.03■□□□□ 0.32
BDNF-215ENST00000530861 PTPRGP23470 1445 aa17.02■□□□□ 0.32
BDNF-215ENST00000530861 PRDM2Q13029 1718 aa17.02■□□□□ 0.32
BDNF-215ENST00000530861 PCF11O94913 1555 aaKnown RBP17.02■□□□□ 0.31
BDNF-215ENST00000530861 CCDC136Q96JN2 1154 aa17.02■□□□□ 0.31
BDNF-215ENST00000530861 TIAM1Q13009 1591 aa17.01■□□□□ 0.31
BDNF-215ENST00000530861 STK26Q9P289 416 aa17■□□□□ 0.31
BDNF-215ENST00000530861 SNAPC4Q5SXM2 1469 aa16.99■□□□□ 0.31
BDNF-215ENST00000530861 SLC24A1O60721 1099 aa16.99■□□□□ 0.31
BDNF-215ENST00000530861 NBPF1Q3BBV0 1214 aa16.99■□□□□ 0.31
BDNF-215ENST00000530861 CYB5RLQ6IPT4 315 aa16.99■□□□□ 0.31
BDNF-215ENST00000530861 ABCA10Q8WWZ4 1543 aa16.99■□□□□ 0.31
BDNF-215ENST00000530861 PLB1Q6P1J6 1458 aa16.98■□□□□ 0.31
BDNF-215ENST00000530861 PPM1GO15355 546 aaPredicted RBP16.97■□□□□ 0.31
BDNF-215ENST00000530861 DNMBPQ6XZF7 1577 aa16.97■□□□□ 0.31
BDNF-215ENST00000530861 TIMELESSQ9UNS1 1208 aa16.96■□□□□ 0.31
BDNF-215ENST00000530861 ANKRD30AQ9BXX3 1397 aa16.94■□□□□ 0.3
BDNF-215ENST00000530861 GRIN2BQ13224 1484 aa16.94■□□□□ 0.3
BDNF-215ENST00000530861 BIVM-ERCC5R4GMW8 1640 aa16.94■□□□□ 0.3
BDNF-215ENST00000530861 PRKRIP1Q9H875 184 aaPredicted RBP16.94■□□□□ 0.3
BDNF-215ENST00000530861 CANXP27824 592 aaKnown RBP16.93■□□□□ 0.3
BDNF-215ENST00000530861 EFCAB2Q5VUJ9 269 aa16.92■□□□□ 0.3
BDNF-215ENST00000530861 NAIPQ13075 1403 aa16.92■□□□□ 0.3
BDNF-215ENST00000530861 ROCK2O75116 1388 aaKnown RBP16.91■□□□□ 0.3
BDNF-215ENST00000530861 NBR1Q14596 966 aa16.91■□□□□ 0.3
BDNF-215ENST00000530861 KIF7Q2M1P5 1343 aa16.91■□□□□ 0.3
BDNF-215ENST00000530861 WDR43Q15061 677 aaKnown RBP eCLIP16.91■□□□□ 0.3
BDNF-215ENST00000530861 TSHZ2Q9NRE2 1034 aa16.9■□□□□ 0.3
BDNF-215ENST00000530861 UACAQ9BZF9 1416 aa16.9■□□□□ 0.3
BDNF-215ENST00000530861 SOX12O15370 315 aa16.9■□□□□ 0.3
BDNF-215ENST00000530861 KNSTRNQ9Y448 316 aa16.9■□□□□ 0.3
BDNF-215ENST00000530861 FYCO1Q9BQS8 1478 aa16.89■□□□□ 0.29
BDNF-215ENST00000530861 ESF1Q9H501 851 aaKnown RBP16.88■□□□□ 0.29
BDNF-215ENST00000530861 MRC2Q9UBG0 1479 aa16.88■□□□□ 0.29
BDNF-215ENST00000530861 CCER2I3L3R5 266 aa16.88■□□□□ 0.29
BDNF-215ENST00000530861 CCDC146Q8IYE0 955 aa16.88■□□□□ 0.29
BDNF-215ENST00000530861 SPAG9O60271 1321 aaKnown RBP16.87■□□□□ 0.29
BDNF-215ENST00000530861 TRAK1Q9UPV9 953 aa16.87■□□□□ 0.29
BDNF-215ENST00000530861 ARID4BQ4LE39 1312 aaPredicted RBP16.87■□□□□ 0.29
BDNF-215ENST00000530861 NUTM2FA1L443 756 aa16.86■□□□□ 0.29
BDNF-215ENST00000530861 PLIN1O60240 522 aa16.86■□□□□ 0.29
BDNF-215ENST00000530861 EPRSP07814 1512 aaKnown RBP16.85■□□□□ 0.29
BDNF-215ENST00000530861 PANK3Q9H999 370 aa16.84■□□□□ 0.29
BDNF-215ENST00000530861 USP47Q96K76 1375 aa16.84■□□□□ 0.29
BDNF-215ENST00000530861 KIF15Q9NS87 1388 aa16.84■□□□□ 0.29
BDNF-215ENST00000530861 TMEM132EQ6IEE7 984 aa16.82■□□□□ 0.28
BDNF-215ENST00000530861 DAXXQ9UER7 740 aaPredicted RBP16.82■□□□□ 0.28
BDNF-215ENST00000530861 ANKRD50Q9ULJ7 1429 aa16.81■□□□□ 0.28
BDNF-215ENST00000530861 RBM19Q9Y4C8 960 aaKnown RBP16.81■□□□□ 0.28
BDNF-215ENST00000530861 HFM1A2PYH4 1435 aa16.8■□□□□ 0.28
BDNF-215ENST00000530861 ARHGEF11O15085 1522 aa16.79■□□□□ 0.28
BDNF-215ENST00000530861 MAPKBP1O60336 1514 aa16.79■□□□□ 0.28
BDNF-215ENST00000530861 TMF1P82094 1093 aa16.78■□□□□ 0.28
BDNF-215ENST00000530861 RRP7AQ9Y3A4 280 aaKnown RBP16.78■□□□□ 0.28
BDNF-215ENST00000530861 FRAT1Q92837 279 aaPredicted RBP16.77■□□□□ 0.27
BDNF-215ENST00000530861 RAPGEF3O95398 923 aa16.77■□□□□ 0.27
BDNF-215ENST00000530861 CCDC7Q96M83 1385 aa16.76■□□□□ 0.27
BDNF-215ENST00000530861 ZBTB7CA1YPR0 619 aa16.76■□□□□ 0.27
BDNF-215ENST00000530861 THOC2Q8NI27 1593 aaKnown RBP16.76■□□□□ 0.27
BDNF-215ENST00000530861 U2SURPO15042 1029 aaKnown RBP16.75■□□□□ 0.27
BDNF-215ENST00000530861 CDCA7LQ96GN5 454 aa16.75■□□□□ 0.27
BDNF-215ENST00000530861 RGS3P49796 1198 aa16.74■□□□□ 0.27
BDNF-215ENST00000530861 CFAP70Q5T0N1 1121 aa16.74■□□□□ 0.27
BDNF-215ENST00000530861 LAS1LQ9Y4W2 734 aaKnown RBP16.74■□□□□ 0.27
BDNF-215ENST00000530861 LAMC3Q9Y6N6 1575 aa16.74■□□□□ 0.27
BDNF-215ENST00000530861 ABCC5O15440 1437 aa16.73■□□□□ 0.27
BDNF-215ENST00000530861 WASHC2CQ9Y4E1 1318 aa16.73■□□□□ 0.27
BDNF-215ENST00000530861 SRPK2P78362 688 aaKnown RBP16.73■□□□□ 0.27
BDNF-215ENST00000530861 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
BDNF-215ENST00000530861 DAPK1P53355 1430 aa16.72■□□□□ 0.27
BDNF-215ENST00000530861 POGKQ9P215 609 aa16.72■□□□□ 0.27
BDNF-215ENST00000530861 CCDC144AA2RUR9 1427 aa16.72■□□□□ 0.27
BDNF-215ENST00000530861 SKAP1Q86WV1 359 aa16.71■□□□□ 0.27
BDNF-215ENST00000530861 IQGAP2Q13576 1575 aa16.7■□□□□ 0.26
BDNF-215ENST00000530861 PPP4R2Q9NY27 417 aa16.7■□□□□ 0.26
BDNF-215ENST00000530861 KIAA0586Q9BVV6 1533 aa16.69■□□□□ 0.26
BDNF-215ENST00000530861 TRHP20396 242 aaPredicted RBP16.69■□□□□ 0.26
BDNF-215ENST00000530861 EFCAB5A4FU69 1503 aa16.69■□□□□ 0.26
BDNF-215ENST00000530861 TROQ12816 1431 aaPredicted RBP16.69■□□□□ 0.26
BDNF-215ENST00000530861 GRIN2AQ12879 1464 aa16.68■□□□□ 0.26
BDNF-215ENST00000530861 C14orf37Q86TY3 774 aa16.68■□□□□ 0.26
BDNF-215ENST00000530861 OSCARQ8IYS5 282 aa16.68■□□□□ 0.26
BDNF-215ENST00000530861 BCL2L13Q9BXK5 485 aa16.68■□□□□ 0.26
BDNF-215ENST00000530861 KIF21AQ7Z4S6 1674 aa16.66■□□□□ 0.26
BDNF-215ENST00000530861 ARXQ96QS3 562 aa16.65■□□□□ 0.26
BDNF-215ENST00000530861 CLUAP1Q96AJ1 413 aa16.65■□□□□ 0.26
BDNF-215ENST00000530861 C9orf84Q5VXU9 1444 aa16.65■□□□□ 0.26
BDNF-215ENST00000530861 ANKRD30BQ9BXX2 1392 aa16.64■□□□□ 0.25
BDNF-215ENST00000530861 ANP32AP39687 249 aaKnown RBP16.64■□□□□ 0.25
BDNF-215ENST00000530861 EXOC6Q8TAG9 804 aa16.64■□□□□ 0.25
BDNF-215ENST00000530861 MORC1Q86VD1 984 aa16.63■□□□□ 0.25
BDNF-215ENST00000530861 SCAPERQ9BY12 1400 aa16.63■□□□□ 0.25
BDNF-215ENST00000530861 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.63■□□□□ 0.25
BDNF-215ENST00000530861 PTPN23Q9H3S7 1636 aa16.63■□□□□ 0.25
BDNF-215ENST00000530861 RCAN3Q9UKA8 241 aa16.62■□□□□ 0.25
BDNF-215ENST00000530861 KTN1Q86UP2 1357 aaKnown RBP16.62■□□□□ 0.25
BDNF-215ENST00000530861 MAGI3Q5TCQ9 1506 aa16.61■□□□□ 0.25
BDNF-215ENST00000530861 EHBP1L1Q8N3D4 1523 aa16.61■□□□□ 0.25
BDNF-215ENST00000530861 NUP153P49790 1475 aaKnown RBP16.61■□□□□ 0.25
BDNF-215ENST00000530861 MINK1Q8N4C8 1332 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms