RNA–Protein interactions for RNA: ENST00000530853.5

NIN-216, Transcript of ninein, humanhuman

TSL 5

Gene NIN, Length 5,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-216ENST00000530853 CCNB3Q8WWL7 1395 aa8.97□□□□□ -0.97
NIN-216ENST00000530853 CCER2I3L3R5 266 aa8.96□□□□□ -0.97
NIN-216ENST00000530853 PPP4R2Q9NY27 417 aa8.96□□□□□ -0.97
NIN-216ENST00000530853 KCNH8Q96L42 1107 aa8.96□□□□□ -0.98
NIN-216ENST00000530853 EIF5BO60841 1220 aaKnown RBP8.95□□□□□ -0.98
NIN-216ENST00000530853 SENP3Q9H4L4 574 aaPredicted RBP8.95□□□□□ -0.98
NIN-216ENST00000530853 DEKP35659 375 aaKnown RBP8.95□□□□□ -0.98
NIN-216ENST00000530853 DHX57Q6P158 1386 aaKnown RBP8.95□□□□□ -0.98
NIN-216ENST00000530853 HMGB2P26583 209 aaKnown RBP8.94□□□□□ -0.98
NIN-216ENST00000530853 NOP58Q9Y2X3 529 aaKnown RBP8.94□□□□□ -0.98
NIN-216ENST00000530853 FHOD3Q2V2M9 1422 aa8.94□□□□□ -0.98
NIN-216ENST00000530853 ARHGAP35Q9NRY4 1499 aa8.93□□□□□ -0.98
NIN-216ENST00000530853 CHD1O14646 1710 aa8.92□□□□□ -0.98
NIN-216ENST00000530853 EIF4G2P78344 907 aaKnown RBP eCLIP8.91□□□□□ -0.98
NIN-216ENST00000530853 PPP1R1BQ9UD71 204 aaPredicted RBP8.91□□□□□ -0.98
NIN-216ENST00000530853 CCDC9Q9Y3X0 531 aaKnown RBP8.91□□□□□ -0.98
NIN-216ENST00000530853 B4GALNT3Q6L9W6 998 aa8.91□□□□□ -0.98
NIN-216ENST00000530853 CEP170Q5SW79 1584 aa8.91□□□□□ -0.98
NIN-216ENST00000530853 EFCAB5A4FU69 1503 aa8.9□□□□□ -0.98
NIN-216ENST00000530853 MTUS2Q5JR59 1369 aa8.9□□□□□ -0.98
NIN-216ENST00000530853 SETD5Q9C0A6 1442 aa8.89□□□□□ -0.99
NIN-216ENST00000530853 RAB3GAP2Q9H2M9 1393 aa8.89□□□□□ -0.99
NIN-216ENST00000530853 CHIC2Q9UKJ5 165 aa8.89□□□□□ -0.99
NIN-216ENST00000530853 UGGT2Q9NYU1 1516 aa8.89□□□□□ -0.99
NIN-216ENST00000530853 TIMELESSQ9UNS1 1208 aa8.89□□□□□ -0.99
NIN-216ENST00000530853 UACAQ9BZF9 1416 aa8.88□□□□□ -0.99
NIN-216ENST00000530853 CANXP27824 592 aaKnown RBP8.88□□□□□ -0.99
NIN-216ENST00000530853 TMC1Q8TDI8 760 aa8.87□□□□□ -0.99
NIN-216ENST00000530853 SALL2Q9Y467 1007 aaPredicted RBP8.87□□□□□ -0.99
NIN-216ENST00000530853 ARHGEF11O15085 1522 aa8.87□□□□□ -0.99
NIN-216ENST00000530853 RTN4Q9NQC3 1192 aaKnown RBP8.86□□□□□ -0.99
NIN-216ENST00000530853 TMX4Q9H1E5 349 aaPredicted RBP8.86□□□□□ -0.99
NIN-216ENST00000530853 NPHP1O15259 732 aa8.85□□□□□ -0.99
NIN-216ENST00000530853 CLASP1Q7Z460 1538 aa8.85□□□□□ -0.99
NIN-216ENST00000530853 ERICH6BQ5W0A0 696 aa8.85□□□□□ -0.99
NIN-216ENST00000530853 RRP7BPQ9NSQ0 103 aa8.84□□□□□ -0.99
NIN-216ENST00000530853 LAS1LQ9Y4W2 734 aaKnown RBP8.83□□□□□ -1
NIN-216ENST00000530853 CTTNBP2Q8WZ74 1663 aa8.83□□□□□ -1
NIN-216ENST00000530853 SENP3-EIF4A1A0A087X0R7 540 aa8.83□□□□□ -1
NIN-216ENST00000530853 FANCIQ9NVI1 1328 aa8.83□□□□□ -1
NIN-216ENST00000530853 DISP1Q96F81 1524 aa8.83□□□□□ -1
NIN-216ENST00000530853 FAM69CQ0P6D2 419 aa8.83□□□□□ -1
NIN-216ENST00000530853 DDRGK1Q96HY6 314 aa8.82□□□□□ -1
NIN-216ENST00000530853 PLB1Q6P1J6 1458 aa8.82□□□□□ -1
NIN-216ENST00000530853 CASKIN1Q8WXD9 1431 aa8.82□□□□□ -1
NIN-216ENST00000530853 PHLDB1Q86UU1 1377 aa8.81□□□□□ -1
NIN-216ENST00000530853 KIAA0556O60303 1618 aa8.81□□□□□ -1
NIN-216ENST00000530853 PPM1GO15355 546 aaPredicted RBP8.81□□□□□ -1
NIN-216ENST00000530853 CFDP1Q9UEE9 299 aaPredicted RBP8.8□□□□□ -1
NIN-216ENST00000530853 HSPA5P11021 654 aaKnown RBP8.79□□□□□ -1
NIN-216ENST00000530853 MLECQ14165 292 aa8.79□□□□□ -1
NIN-216ENST00000530853 EFCAB2Q5VUJ9 269 aa8.79□□□□□ -1
NIN-216ENST00000530853 CCDC18Q5T9S5 1454 aa8.78□□□□□ -1
NIN-216ENST00000530853 FYCO1Q9BQS8 1478 aa8.78□□□□□ -1
NIN-216ENST00000530853 DISP3Q9P2K9 1392 aa8.78□□□□□ -1
NIN-216ENST00000530853 RRBP1Q9P2E9 1410 aaKnown RBP8.77□□□□□ -1
NIN-216ENST00000530853 GLIPR1L2Q4G1C9 344 aa8.77□□□□□ -1.01
NIN-216ENST00000530853 ABCC2Q92887 1545 aa8.76□□□□□ -1.01
NIN-216ENST00000530853 ERCC6L2Q5T890 1561 aa8.76□□□□□ -1.01
NIN-216ENST00000530853 LRRC9Q6ZRR7 1453 aa8.76□□□□□ -1.01
NIN-216ENST00000530853 IPO9Q96P70 1041 aaKnown RBP8.76□□□□□ -1.01
NIN-216ENST00000530853 EID1Q9Y6B2 187 aa8.76□□□□□ -1.01
NIN-216ENST00000530853 RIMBP3CA6NJZ7 1639 aa8.75□□□□□ -1.01
NIN-216ENST00000530853 RIMBP3BA6NNM3 1639 aa8.75□□□□□ -1.01
NIN-216ENST00000530853 SHROOM2Q13796 1616 aa8.75□□□□□ -1.01
NIN-216ENST00000530853 RIMBP3Q9UFD9 1639 aa8.75□□□□□ -1.01
NIN-216ENST00000530853 HECW1Q76N89 1606 aa8.75□□□□□ -1.01
NIN-216ENST00000530853 SAMD9Q5K651 1589 aa8.75□□□□□ -1.01
NIN-216ENST00000530853 EPRSP07814 1512 aaKnown RBP8.74□□□□□ -1.01
NIN-216ENST00000530853 TIAM1Q13009 1591 aa8.74□□□□□ -1.01
NIN-216ENST00000530853 UHRF1BP1LA0JNW5 1464 aa8.74□□□□□ -1.01
NIN-216ENST00000530853 ARXQ96QS3 562 aa8.74□□□□□ -1.01
NIN-216ENST00000530853 ATP10BO94823 1461 aa8.74□□□□□ -1.01
NIN-216ENST00000530853 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.74□□□□□ -1.01
NIN-216ENST00000530853 TROQ12816 1431 aaPredicted RBP8.74□□□□□ -1.01
NIN-216ENST00000530853 PCF11O94913 1555 aaKnown RBP8.73□□□□□ -1.01
NIN-216ENST00000530853 ASXL2Q76L83 1435 aa8.73□□□□□ -1.01
NIN-216ENST00000530853 KLHL34Q8N239 644 aa8.73□□□□□ -1.01
NIN-216ENST00000530853 LMOD2Q6P5Q4 547 aa8.73□□□□□ -1.01
NIN-216ENST00000530853 UPF2Q9HAU5 1272 aaKnown RBP8.73□□□□□ -1.01
NIN-216ENST00000530853 TOM1O60784 492 aa8.73□□□□□ -1.01
NIN-216ENST00000530853 KDM2AQ9Y2K7 1162 aa8.73□□□□□ -1.01
NIN-216ENST00000530853 NUP153P49790 1475 aaKnown RBP8.72□□□□□ -1.01
NIN-216ENST00000530853 RAPGEF6Q8TEU7 1601 aa8.72□□□□□ -1.01
NIN-216ENST00000530853 CDCA8Q53HL2 280 aa8.72□□□□□ -1.01
NIN-216ENST00000530853 CFAP44Q96MT7 982 aa8.71□□□□□ -1.01
NIN-216ENST00000530853 C16orf71Q8IYS4 520 aaPredicted RBP8.71□□□□□ -1.02
NIN-216ENST00000530853 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.71□□□□□ -1.02
NIN-216ENST00000530853 KDM5BQ9UGL1 1544 aa8.7□□□□□ -1.02
NIN-216ENST00000530853 KRI1Q8N9T8 703 aaKnown RBP8.7□□□□□ -1.02
NIN-216ENST00000530853 CDK13Q14004 1512 aaKnown RBP8.7□□□□□ -1.02
NIN-216ENST00000530853 ZBTB7CA1YPR0 619 aa8.7□□□□□ -1.02
NIN-216ENST00000530853 WDR43Q15061 677 aaKnown RBP eCLIP8.7□□□□□ -1.02
NIN-216ENST00000530853 RSPH4AQ5TD94 716 aa8.7□□□□□ -1.02
NIN-216ENST00000530853 KANK1Q14678 1352 aa8.7□□□□□ -1.02
NIN-216ENST00000530853 WDR7Q9Y4E6 1490 aa8.7□□□□□ -1.02
NIN-216ENST00000530853 NUDCQ9Y266 331 aa8.7□□□□□ -1.02
NIN-216ENST00000530853 CD109Q6YHK3 1445 aa8.69□□□□□ -1.02
NIN-216ENST00000530853 ABCA8O94911 1581 aa8.69□□□□□ -1.02
NIN-216ENST00000530853 NUTM2BA6NNL0 878 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms