RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 NUDCQ9Y266 331 aa15.91■□□□□ 0.14
TRIM3-210ENST00000530724 ZMYM4Q5VZL5 1548 aa15.89■□□□□ 0.13
TRIM3-210ENST00000530724 ROCK2O75116 1388 aaKnown RBP15.89■□□□□ 0.13
TRIM3-210ENST00000530724 MRS2Q9HD23 443 aa15.88■□□□□ 0.13
TRIM3-210ENST00000530724 MAGI3Q5TCQ9 1506 aa15.88■□□□□ 0.13
TRIM3-210ENST00000530724 ANP32AP39687 249 aaKnown RBP15.87■□□□□ 0.13
TRIM3-210ENST00000530724 KIF7Q2M1P5 1343 aa15.87■□□□□ 0.13
TRIM3-210ENST00000530724 C11orf95C9JLR9 678 aaPredicted RBP15.86■□□□□ 0.13
TRIM3-210ENST00000530724 CCDC184Q52MB2 194 aa15.86■□□□□ 0.13
TRIM3-210ENST00000530724 L3MBTL2Q969R5 705 aa15.86■□□□□ 0.13
TRIM3-210ENST00000530724 MPHOSPH9Q99550 1183 aa15.86■□□□□ 0.13
TRIM3-210ENST00000530724 LRPPRCP42704 1394 aaKnown RBP15.85■□□□□ 0.13
TRIM3-210ENST00000530724 UHRF1BP1Q6BDS2 1440 aa15.85■□□□□ 0.13
TRIM3-210ENST00000530724 RAD54L2Q9Y4B4 1467 aa15.84■□□□□ 0.13
TRIM3-210ENST00000530724 MS4A1P11836 297 aa15.84■□□□□ 0.13
TRIM3-210ENST00000530724 IRX6P78412 446 aaPredicted RBP15.84■□□□□ 0.13
TRIM3-210ENST00000530724 B4GALNT3Q6L9W6 998 aa15.84■□□□□ 0.13
TRIM3-210ENST00000530724 KDM6BO15054 1643 aa15.83■□□□□ 0.12
TRIM3-210ENST00000530724 DNMT1P26358 1616 aaKnown RBP15.82■□□□□ 0.12
TRIM3-210ENST00000530724 TCERG1O14776 1098 aaKnown RBP15.81■□□□□ 0.12
TRIM3-210ENST00000530724 EPRSP07814 1512 aaKnown RBP15.81■□□□□ 0.12
TRIM3-210ENST00000530724 PAK3O75914 559 aaPredicted RBP15.8■□□□□ 0.12
TRIM3-210ENST00000530724 P3H3Q8IVL6 736 aa15.8■□□□□ 0.12
TRIM3-210ENST00000530724 WASHC2CQ9Y4E1 1318 aa15.79■□□□□ 0.12
TRIM3-210ENST00000530724 NESP48681 1621 aa15.79■□□□□ 0.12
TRIM3-210ENST00000530724 WDR62O43379 1518 aa15.78■□□□□ 0.12
TRIM3-210ENST00000530724 ARHGEF12Q9NZN5 1544 aa15.78■□□□□ 0.12
TRIM3-210ENST00000530724 DAPK1P53355 1430 aa15.78■□□□□ 0.12
TRIM3-210ENST00000530724 BRD4O60885 1362 aaPredicted RBP15.78■□□□□ 0.12
TRIM3-210ENST00000530724 ZBTB47Q9UFB7 747 aaPredicted RBP15.78■□□□□ 0.12
TRIM3-210ENST00000530724 ADGRL2O95490 1459 aa15.78■□□□□ 0.12
TRIM3-210ENST00000530724 GAPVD1Q14C86 1478 aa15.78■□□□□ 0.12
TRIM3-210ENST00000530724 KIF14Q15058 1648 aa15.77■□□□□ 0.12
TRIM3-210ENST00000530724 NBPF8Q3BBV2 869 aa15.77■□□□□ 0.12
TRIM3-210ENST00000530724 RTL5Q5HYW3 569 aaPredicted RBP15.76■□□□□ 0.11
TRIM3-210ENST00000530724 PNISRQ8TF01 805 aaKnown RBP15.76■□□□□ 0.11
TRIM3-210ENST00000530724 RALGAPBQ86X10 1494 aa15.76■□□□□ 0.11
TRIM3-210ENST00000530724 ABCC5O15440 1437 aa15.76■□□□□ 0.11
TRIM3-210ENST00000530724 LAMC3Q9Y6N6 1575 aa15.75■□□□□ 0.11
TRIM3-210ENST00000530724 PDE3BQ13370 1112 aa15.75■□□□□ 0.11
TRIM3-210ENST00000530724 FAM9BQ8IZU0 186 aa15.75■□□□□ 0.11
TRIM3-210ENST00000530724 CCDC136Q96JN2 1154 aa15.75■□□□□ 0.11
TRIM3-210ENST00000530724 PZPP20742 1482 aa15.74■□□□□ 0.11
TRIM3-210ENST00000530724 KDM5CP41229 1560 aa15.74■□□□□ 0.11
TRIM3-210ENST00000530724 PRKCSHP14314 528 aaPredicted RBP15.73■□□□□ 0.11
TRIM3-210ENST00000530724 ATP1B4Q9UN42 357 aaPredicted RBP15.73■□□□□ 0.11
TRIM3-210ENST00000530724 PPM1GO15355 546 aaPredicted RBP15.72■□□□□ 0.11
TRIM3-210ENST00000530724 URB2Q14146 1524 aaKnown RBP15.72■□□□□ 0.11
TRIM3-210ENST00000530724 KIAA1107Q9UPP5 1409 aa15.71■□□□□ 0.11
TRIM3-210ENST00000530724 KIF15Q9NS87 1388 aa15.71■□□□□ 0.11
TRIM3-210ENST00000530724 RALBP1Q15311 655 aa15.7■□□□□ 0.1
TRIM3-210ENST00000530724 RRP7BPQ9NSQ0 103 aa15.7■□□□□ 0.1
TRIM3-210ENST00000530724 KDM5DQ9BY66 1539 aa15.69■□□□□ 0.1
TRIM3-210ENST00000530724 USP47Q96K76 1375 aa15.69■□□□□ 0.1
TRIM3-210ENST00000530724 IQGAP2Q13576 1575 aa15.68■□□□□ 0.1
TRIM3-210ENST00000530724 BCORL1Q5H9F3 1711 aa15.68■□□□□ 0.1
TRIM3-210ENST00000530724 PLEKHH2Q8IVE3 1493 aa15.67■□□□□ 0.1
TRIM3-210ENST00000530724 BACH2Q9BYV9 841 aa15.67■□□□□ 0.1
TRIM3-210ENST00000530724 E9PCH4 1651 aa15.67■□□□□ 0.1
TRIM3-210ENST00000530724 RRP1P56182 461 aaKnown RBP15.66■□□□□ 0.1
TRIM3-210ENST00000530724 TARBP1Q13395 1621 aaKnown RBP15.65■□□□□ 0.1
TRIM3-210ENST00000530724 DDRGK1Q96HY6 314 aa15.64■□□□□ 0.09
TRIM3-210ENST00000530724 MYBBP1AQ9BQG0 1328 aaKnown RBP15.64■□□□□ 0.09
TRIM3-210ENST00000530724 ADGBQ8N7X0 1667 aa15.63■□□□□ 0.09
TRIM3-210ENST00000530724 SHANK2Q9UPX8 1470 aa15.63■□□□□ 0.09
TRIM3-210ENST00000530724 PDE4AP27815 886 aa15.61■□□□□ 0.09
TRIM3-210ENST00000530724 NBR1Q14596 966 aa15.61■□□□□ 0.09
TRIM3-210ENST00000530724 ADAMTS12P58397 1594 aa15.61■□□□□ 0.09
TRIM3-210ENST00000530724 PARD3Q8TEW0 1356 aa15.61■□□□□ 0.09
TRIM3-210ENST00000530724 PTPRGP23470 1445 aa15.6■□□□□ 0.09
TRIM3-210ENST00000530724 ADCY10Q96PN6 1610 aa15.6■□□□□ 0.09
TRIM3-210ENST00000530724 BLMP54132 1417 aaPredicted RBP15.59■□□□□ 0.09
TRIM3-210ENST00000530724 LAMC1P11047 1609 aa15.58■□□□□ 0.09
TRIM3-210ENST00000530724 CROCC2H7BZ55 1655 aa15.58■□□□□ 0.08
TRIM3-210ENST00000530724 SLC4A1APQ9BWU0 796 aaKnown RBP15.58■□□□□ 0.08
TRIM3-210ENST00000530724 PDS5BQ9NTI5 1447 aa15.58■□□□□ 0.08
TRIM3-210ENST00000530724 CDK13Q14004 1512 aaKnown RBP15.58■□□□□ 0.08
TRIM3-210ENST00000530724 ITSN2Q9NZM3 1697 aa15.57■□□□□ 0.08
TRIM3-210ENST00000530724 TMC1Q8TDI8 760 aa15.56■□□□□ 0.08
TRIM3-210ENST00000530724 RCAN3Q9UKA8 241 aa15.56■□□□□ 0.08
TRIM3-210ENST00000530724 CHIC2Q9UKJ5 165 aa15.56■□□□□ 0.08
TRIM3-210ENST00000530724 TDRD9Q8NDG6 1382 aaKnown RBP15.56■□□□□ 0.08
TRIM3-210ENST00000530724 TROQ12816 1431 aaPredicted RBP15.56■□□□□ 0.08
TRIM3-210ENST00000530724 NUP153P49790 1475 aaKnown RBP15.56■□□□□ 0.08
TRIM3-210ENST00000530724 CEP170Q5SW79 1584 aa15.55■□□□□ 0.08
TRIM3-210ENST00000530724 GPRASP1Q5JY77 1395 aa15.55■□□□□ 0.08
TRIM3-210ENST00000530724 NLRP13Q86W25 1043 aa15.55■□□□□ 0.08
TRIM3-210ENST00000530724 KIAA0586Q9BVV6 1533 aa15.54■□□□□ 0.08
TRIM3-210ENST00000530724 CAMSAP2Q08AD1 1489 aa15.53■□□□□ 0.08
TRIM3-210ENST00000530724 KIAA0556O60303 1618 aa15.52■□□□□ 0.08
TRIM3-210ENST00000530724 ANKRD30AQ9BXX3 1397 aa15.51■□□□□ 0.07
TRIM3-210ENST00000530724 DISP1Q96F81 1524 aa15.51■□□□□ 0.07
TRIM3-210ENST00000530724 RAPGEF6Q8TEU7 1601 aa15.5■□□□□ 0.07
TRIM3-210ENST00000530724 GPATCH8Q9UKJ3 1502 aaKnown RBP15.5■□□□□ 0.07
TRIM3-210ENST00000530724 NEFMP07197 916 aa15.5■□□□□ 0.07
TRIM3-210ENST00000530724 PBRM1Q86U86 1689 aa15.5■□□□□ 0.07
TRIM3-210ENST00000530724 EXOC6Q8TAG9 804 aa15.49■□□□□ 0.07
TRIM3-210ENST00000530724 CLASP1Q7Z460 1538 aa15.48■□□□□ 0.07
TRIM3-210ENST00000530724 ZNF608Q9ULD9 1512 aaPredicted RBP15.48■□□□□ 0.07
TRIM3-210ENST00000530724 KDM2BQ8NHM5 1336 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms