RNA–Protein interactions for RNA: ENST00000530459.1

GMDS-207, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-207ENST00000530459 B4GALNT3Q6L9W6 998 aa6.78□□□□□ -1.32
GMDS-207ENST00000530459 IL27Q8NEV9 243 aa6.78□□□□□ -1.32
GMDS-207ENST00000530459 AQRO60306 1485 aaKnown RBP eCLIP6.78□□□□□ -1.32
GMDS-207ENST00000530459 HFM1A2PYH4 1435 aa6.77□□□□□ -1.33
GMDS-207ENST00000530459 IRX6P78412 446 aaPredicted RBP6.77□□□□□ -1.33
GMDS-207ENST00000530459 ATAD2BQ9ULI0 1458 aa6.77□□□□□ -1.33
GMDS-207ENST00000530459 NCOA1Q15788 1441 aa6.76□□□□□ -1.33
GMDS-207ENST00000530459 TCERG1O14776 1098 aaKnown RBP6.76□□□□□ -1.33
GMDS-207ENST00000530459 NPM1P06748 294 aaKnown RBP eCLIP6.76□□□□□ -1.33
GMDS-207ENST00000530459 MS4A1P11836 297 aa6.76□□□□□ -1.33
GMDS-207ENST00000530459 CCDC18Q5T9S5 1454 aa6.75□□□□□ -1.33
GMDS-207ENST00000530459 TRHP20396 242 aaPredicted RBP6.75□□□□□ -1.33
GMDS-207ENST00000530459 RSPH6AQ9H0K4 717 aa6.75□□□□□ -1.33
GMDS-207ENST00000530459 PRKRIP1Q9H875 184 aaPredicted RBP6.75□□□□□ -1.33
GMDS-207ENST00000530459 PTPN23Q9H3S7 1636 aa6.75□□□□□ -1.33
GMDS-207ENST00000530459 NUDCQ9Y266 331 aa6.74□□□□□ -1.33
GMDS-207ENST00000530459 FYCO1Q9BQS8 1478 aa6.73□□□□□ -1.33
GMDS-207ENST00000530459 CUX1P39880 1505 aa6.73□□□□□ -1.33
GMDS-207ENST00000530459 POLA2Q14181 598 aa6.73□□□□□ -1.33
GMDS-207ENST00000530459 SPRYD3Q8NCJ5 442 aa6.73□□□□□ -1.33
GMDS-207ENST00000530459 BICRAQ9NZM4 1560 aa6.73□□□□□ -1.33
GMDS-207ENST00000530459 HECW1Q76N89 1606 aa6.72□□□□□ -1.33
GMDS-207ENST00000530459 CCDC7Q96M83 1385 aa6.72□□□□□ -1.33
GMDS-207ENST00000530459 GSE1Q14687 1217 aa6.72□□□□□ -1.33
GMDS-207ENST00000530459 FAM43AQ8N2R8 423 aa6.72□□□□□ -1.33
GMDS-207ENST00000530459 DDRGK1Q96HY6 314 aa6.72□□□□□ -1.33
GMDS-207ENST00000530459 AKNAQ7Z591 1439 aa6.72□□□□□ -1.33
GMDS-207ENST00000530459 EFCAB5A4FU69 1503 aa6.71□□□□□ -1.33
GMDS-207ENST00000530459 PCF11O94913 1555 aaKnown RBP6.71□□□□□ -1.34
GMDS-207ENST00000530459 FGD6Q6ZV73 1430 aa6.71□□□□□ -1.34
GMDS-207ENST00000530459 CASKIN1Q8WXD9 1431 aa6.71□□□□□ -1.34
GMDS-207ENST00000530459 NEFMP07197 916 aa6.71□□□□□ -1.34
GMDS-207ENST00000530459 HSPA5P11021 654 aaKnown RBP6.71□□□□□ -1.34
GMDS-207ENST00000530459 EIF4G2P78344 907 aaKnown RBP eCLIP6.71□□□□□ -1.34
GMDS-207ENST00000530459 HIRIP3Q9BW71 556 aaPredicted RBP6.71□□□□□ -1.34
GMDS-207ENST00000530459 NAIPQ13075 1403 aa6.7□□□□□ -1.34
GMDS-207ENST00000530459 FMN1Q68DA7 1419 aa6.7□□□□□ -1.34
GMDS-207ENST00000530459 RGL2O15211 777 aa6.7□□□□□ -1.34
GMDS-207ENST00000530459 CCDC184Q52MB2 194 aa6.7□□□□□ -1.34
GMDS-207ENST00000530459 BACH2Q9BYV9 841 aa6.7□□□□□ -1.34
GMDS-207ENST00000530459 MRS2Q9HD23 443 aa6.7□□□□□ -1.34
GMDS-207ENST00000530459 SPATA31E1Q6ZUB1 1445 aa6.69□□□□□ -1.34
GMDS-207ENST00000530459 GCC2Q8IWJ2 1684 aa6.69□□□□□ -1.34
GMDS-207ENST00000530459 FGD5Q6ZNL6 1462 aa6.69□□□□□ -1.34
GMDS-207ENST00000530459 FAM50AQ14320 339 aaKnown RBP6.69□□□□□ -1.34
GMDS-207ENST00000530459 ARID4BQ4LE39 1312 aaPredicted RBP6.69□□□□□ -1.34
GMDS-207ENST00000530459 IGF1RP08069 1367 aa6.69□□□□□ -1.34
GMDS-207ENST00000530459 PDE4AP27815 886 aa6.68□□□□□ -1.34
GMDS-207ENST00000530459 RANGAP1P46060 587 aaPredicted RBP6.68□□□□□ -1.34
GMDS-207ENST00000530459 PLCD3Q8N3E9 789 aa6.68□□□□□ -1.34
GMDS-207ENST00000530459 ZBTB12Q9Y330 459 aaPredicted RBP6.68□□□□□ -1.34
GMDS-207ENST00000530459 MIA2Q96PC5 1412 aa6.67□□□□□ -1.34
GMDS-207ENST00000530459 THOC2Q8NI27 1593 aaKnown RBP6.67□□□□□ -1.34
GMDS-207ENST00000530459 GLIPR1L2Q4G1C9 344 aa6.67□□□□□ -1.34
GMDS-207ENST00000530459 SPINK5Q9NQ38 1064 aaPredicted RBP6.67□□□□□ -1.34
GMDS-207ENST00000530459 INSRP06213 1382 aa6.67□□□□□ -1.34
GMDS-207ENST00000530459 KTN1Q86UP2 1357 aaKnown RBP6.67□□□□□ -1.34
GMDS-207ENST00000530459 PRDM2Q13029 1718 aa6.67□□□□□ -1.34
GMDS-207ENST00000530459 PTPRKQ15262 1439 aa6.67□□□□□ -1.34
GMDS-207ENST00000530459 DENND4BO75064 1496 aaPredicted RBP6.66□□□□□ -1.34
GMDS-207ENST00000530459 HMGXB3Q12766 1538 aa6.66□□□□□ -1.34
GMDS-207ENST00000530459 FAM9BQ8IZU0 186 aa6.66□□□□□ -1.34
GMDS-207ENST00000530459 PKNOX2Q96KN3 472 aa6.66□□□□□ -1.34
GMDS-207ENST00000530459 STAG3Q9UJ98 1225 aa6.66□□□□□ -1.34
GMDS-207ENST00000530459 LRPPRCP42704 1394 aaKnown RBP6.66□□□□□ -1.34
GMDS-207ENST00000530459 DHX29Q7Z478 1369 aaKnown RBP6.66□□□□□ -1.34
GMDS-207ENST00000530459 TCOF1Q13428 1488 aaKnown RBP6.66□□□□□ -1.34
GMDS-207ENST00000530459 ZMYM4Q5VZL5 1548 aa6.66□□□□□ -1.34
GMDS-207ENST00000530459 CAPN15O75808 1086 aa6.65□□□□□ -1.34
GMDS-207ENST00000530459 CHGAP10645 457 aaKnown RBP6.65□□□□□ -1.34
GMDS-207ENST00000530459 PDE3BQ13370 1112 aa6.65□□□□□ -1.34
GMDS-207ENST00000530459 BRPF3Q9ULD4 1205 aa6.65□□□□□ -1.34
GMDS-207ENST00000530459 CARMIL1Q5VZK9 1371 aa6.65□□□□□ -1.35
GMDS-207ENST00000530459 CFTRP13569 1480 aa6.65□□□□□ -1.35
GMDS-207ENST00000530459 ARHGEF11O15085 1522 aa6.65□□□□□ -1.35
GMDS-207ENST00000530459 NFKBIBQ15653 356 aa6.64□□□□□ -1.35
GMDS-207ENST00000530459 MYOM3Q5VTT5 1437 aa6.64□□□□□ -1.35
GMDS-207ENST00000530459 ROCK2O75116 1388 aaKnown RBP6.63□□□□□ -1.35
GMDS-207ENST00000530459 RRP1P56182 461 aaKnown RBP6.63□□□□□ -1.35
GMDS-207ENST00000530459 KIF7Q2M1P5 1343 aa6.63□□□□□ -1.35
GMDS-207ENST00000530459 RPRD2Q5VT52 1461 aaKnown RBP6.63□□□□□ -1.35
GMDS-207ENST00000530459 TEX14Q8IWB6 1497 aa6.63□□□□□ -1.35
GMDS-207ENST00000530459 FRAT1Q92837 279 aaPredicted RBP6.63□□□□□ -1.35
GMDS-207ENST00000530459 EHBP1L1Q8N3D4 1523 aa6.62□□□□□ -1.35
GMDS-207ENST00000530459 SNAPC4Q5SXM2 1469 aa6.62□□□□□ -1.35
GMDS-207ENST00000530459 PNISRQ8TF01 805 aaKnown RBP6.62□□□□□ -1.35
GMDS-207ENST00000530459 LAS1LQ9Y4W2 734 aaKnown RBP6.62□□□□□ -1.35
GMDS-207ENST00000530459 SUPT6HQ7KZ85 1726 aaKnown RBP6.62□□□□□ -1.35
GMDS-207ENST00000530459 BRD4O60885 1362 aaPredicted RBP6.61□□□□□ -1.35
GMDS-207ENST00000530459 CIZ1Q9ULV3 898 aaPredicted RBP6.61□□□□□ -1.35
GMDS-207ENST00000530459 UGGT2Q9NYU1 1516 aa6.6□□□□□ -1.35
GMDS-207ENST00000530459 ANKRD30BQ9BXX2 1392 aa6.6□□□□□ -1.35
GMDS-207ENST00000530459 EIF5BO60841 1220 aaKnown RBP6.6□□□□□ -1.35
GMDS-207ENST00000530459 KIF21AQ7Z4S6 1674 aa6.6□□□□□ -1.35
GMDS-207ENST00000530459 CC2D2AQ9P2K1 1620 aa6.6□□□□□ -1.35
GMDS-207ENST00000530459 MBD5Q9P267 1494 aa6.6□□□□□ -1.35
GMDS-207ENST00000530459 CTTNBP2Q8WZ74 1663 aa6.59□□□□□ -1.35
GMDS-207ENST00000530459 TULP1O00294 542 aaPredicted RBP6.59□□□□□ -1.35
GMDS-207ENST00000530459 RRP9O43818 475 aaKnown RBP6.59□□□□□ -1.35
GMDS-207ENST00000530459 L1TD1Q5T7N2 865 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms