RNA–Protein interactions for RNA: ENST00000529991.1

MS4A4A-205, Transcript of membrane spanning 4-domains A4A, humanhuman

TSL 2

Gene MS4A4A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-205ENST00000529991 SMARCA2P51531 1590 aa12.13□□□□□ -0.47
MS4A4A-205ENST00000529991 MROH2BQ7Z745 1585 aa12.13□□□□□ -0.47
MS4A4A-205ENST00000529991 IRX5P78411 483 aaPredicted RBP12.12□□□□□ -0.47
MS4A4A-205ENST00000529991 WDR70Q9NW82 654 aa12.1□□□□□ -0.47
MS4A4A-205ENST00000529991 POTEIP0CG38 1075 aa12.08□□□□□ -0.48
MS4A4A-205ENST00000529991 OCEL1Q9H607 264 aa12.08□□□□□ -0.48
MS4A4A-205ENST00000529991 NCKAP5LQ9HCH0 1330 aa12.08□□□□□ -0.48
MS4A4A-205ENST00000529991 PLCG2P16885 1265 aa12.07□□□□□ -0.48
MS4A4A-205ENST00000529991 IER5LQ5T953 404 aa12.07□□□□□ -0.48
MS4A4A-205ENST00000529991 PEG3Q9GZU2 1588 aa12.07□□□□□ -0.48
MS4A4A-205ENST00000529991 SEC24BO95487 1268 aa12.06□□□□□ -0.48
MS4A4A-205ENST00000529991 COLQQ9Y215 455 aaPredicted RBP12.06□□□□□ -0.48
MS4A4A-205ENST00000529991 BAZ1BQ9UIG0 1483 aaKnown RBP12.06□□□□□ -0.48
MS4A4A-205ENST00000529991 HMGXB3Q12766 1538 aa12.06□□□□□ -0.48
MS4A4A-205ENST00000529991 LARP6Q9BRS8 491 aaKnown RBP12.05□□□□□ -0.48
MS4A4A-205ENST00000529991 MICALL2Q8IY33 904 aa12.04□□□□□ -0.48
MS4A4A-205ENST00000529991 RSF1Q96T23 1441 aaPredicted RBP12.03□□□□□ -0.48
MS4A4A-205ENST00000529991 KCNV2Q8TDN2 545 aa12.02□□□□□ -0.49
MS4A4A-205ENST00000529991 NBR1Q14596 966 aa12.01□□□□□ -0.49
MS4A4A-205ENST00000529991 SLC39A7Q92504 469 aa12.01□□□□□ -0.49
MS4A4A-205ENST00000529991 POTEFA5A3E0 1075 aa12□□□□□ -0.49
MS4A4A-205ENST00000529991 PDE4AP27815 886 aa12□□□□□ -0.49
MS4A4A-205ENST00000529991 CRISPLD2Q9H0B8 497 aa12□□□□□ -0.49
MS4A4A-205ENST00000529991 METRNQ9UJH8 293 aa12□□□□□ -0.49
MS4A4A-205ENST00000529991 BOLA1Q9Y3E2 137 aa12□□□□□ -0.49
MS4A4A-205ENST00000529991 G3V3G9 751 aa11.98□□□□□ -0.49
MS4A4A-205ENST00000529991 WIZO95785 1651 aa11.97□□□□□ -0.49
MS4A4A-205ENST00000529991 C7P10643 843 aa11.96□□□□□ -0.49
MS4A4A-205ENST00000529991 P3H3Q8IVL6 736 aa11.96□□□□□ -0.49
MS4A4A-205ENST00000529991 DDX27Q96GQ7 796 aaKnown RBP11.96□□□□□ -0.49
MS4A4A-205ENST00000529991 E2F4Q16254 413 aa11.94□□□□□ -0.5
MS4A4A-205ENST00000529991 MFSD10Q14728 455 aa11.93□□□□□ -0.5
MS4A4A-205ENST00000529991 L3MBTL3Q96JM7 780 aaPredicted RBP11.93□□□□□ -0.5
MS4A4A-205ENST00000529991 TMEM121BQ9BXQ6 578 aaPredicted RBP11.93□□□□□ -0.5
MS4A4A-205ENST00000529991 GPHNQ9NQX3 736 aaPredicted RBP11.92□□□□□ -0.5
MS4A4A-205ENST00000529991 PPP1R15BQ5SWA1 713 aa11.9□□□□□ -0.5
MS4A4A-205ENST00000529991 TMC2Q8TDI7 906 aa11.9□□□□□ -0.5
MS4A4A-205ENST00000529991 DSG2Q14126 1118 aa11.89□□□□□ -0.51
MS4A4A-205ENST00000529991 TOP2AP11388 1531 aaKnown RBP11.88□□□□□ -0.51
MS4A4A-205ENST00000529991 C2orf72A6NCS6 295 aa11.88□□□□□ -0.51
MS4A4A-205ENST00000529991 PRKCSHP14314 528 aaPredicted RBP11.88□□□□□ -0.51
MS4A4A-205ENST00000529991 TMEM92Q6UXU6 159 aa11.87□□□□□ -0.51
MS4A4A-205ENST00000529991 ARHGEF1Q92888 912 aaKnown RBP11.83□□□□□ -0.52
MS4A4A-205ENST00000529991 TPRNQ4KMQ1 711 aa11.82□□□□□ -0.52
MS4A4A-205ENST00000529991 NESP48681 1621 aa11.82□□□□□ -0.52
MS4A4A-205ENST00000529991 KIF3CO14782 793 aa11.81□□□□□ -0.52
MS4A4A-205ENST00000529991 FOXK1P85037 733 aa11.81□□□□□ -0.52
MS4A4A-205ENST00000529991 CAMK2BQ13554 666 aa11.81□□□□□ -0.52
MS4A4A-205ENST00000529991 C3orf67Q6ZVT6 689 aa11.81□□□□□ -0.52
MS4A4A-205ENST00000529991 PLPP6Q8IY26 295 aa11.81□□□□□ -0.52
MS4A4A-205ENST00000529991 CADPSQ9ULU8 1353 aa11.8□□□□□ -0.52
MS4A4A-205ENST00000529991 ERCC6Q03468 1493 aa11.79□□□□□ -0.52
MS4A4A-205ENST00000529991 SUPT5HO00267 1087 aaKnown RBP11.79□□□□□ -0.52
MS4A4A-205ENST00000529991 EMILIN3Q9NT22 766 aa11.79□□□□□ -0.52
MS4A4A-205ENST00000529991 SEMA3EO15041 775 aa11.78□□□□□ -0.52
MS4A4A-205ENST00000529991 LAMC3Q9Y6N6 1575 aa11.78□□□□□ -0.52
MS4A4A-205ENST00000529991 CCDC88BA6NC98 1476 aa11.76□□□□□ -0.53
MS4A4A-205ENST00000529991 DPYSL4O14531 572 aa11.75□□□□□ -0.53
MS4A4A-205ENST00000529991 PDS5BQ9NTI5 1447 aa11.75□□□□□ -0.53
MS4A4A-205ENST00000529991 POTEB2H3BUK9 544 aa11.74□□□□□ -0.53
MS4A4A-205ENST00000529991 POTEJP0CG39 1038 aa11.73□□□□□ -0.53
MS4A4A-205ENST00000529991 UPF1Q92900 1129 aaKnown RBP eCLIP11.73□□□□□ -0.53
MS4A4A-205ENST00000529991 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.73□□□□□ -0.53
MS4A4A-205ENST00000529991 CFTRP13569 1480 aa11.72□□□□□ -0.53
MS4A4A-205ENST00000529991 ARIH1Q9Y4X5 557 aaPredicted RBP11.69□□□□□ -0.54
MS4A4A-205ENST00000529991 TESPA1A2RU30 521 aaPredicted RBP11.67□□□□□ -0.54
MS4A4A-205ENST00000529991 MAP3K9P80192 1104 aa11.66□□□□□ -0.54
MS4A4A-205ENST00000529991 LMOD2Q6P5Q4 547 aa11.66□□□□□ -0.54
MS4A4A-205ENST00000529991 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.66□□□□□ -0.54
MS4A4A-205ENST00000529991 FANCD2Q9BXW9 1451 aa11.65□□□□□ -0.54
MS4A4A-205ENST00000529991 MLLT3P42568 568 aaPredicted RBP11.65□□□□□ -0.54
MS4A4A-205ENST00000529991 CUX2O14529 1486 aa11.63□□□□□ -0.55
MS4A4A-205ENST00000529991 CEP164Q9UPV0 1460 aa11.63□□□□□ -0.55
MS4A4A-205ENST00000529991 KIF21AQ7Z4S6 1674 aa11.62□□□□□ -0.55
MS4A4A-205ENST00000529991 TULP1O00294 542 aaPredicted RBP11.62□□□□□ -0.55
MS4A4A-205ENST00000529991 PDIA6Q15084 440 aa11.62□□□□□ -0.55
MS4A4A-205ENST00000529991 OXER1Q8TDS5 423 aa11.62□□□□□ -0.55
MS4A4A-205ENST00000529991 MRC2Q9UBG0 1479 aa11.61□□□□□ -0.55
MS4A4A-205ENST00000529991 THOC2Q8NI27 1593 aaKnown RBP11.6□□□□□ -0.55
MS4A4A-205ENST00000529991 SLAIN1Q8ND83 568 aa11.59□□□□□ -0.55
MS4A4A-205ENST00000529991 SPDYE16A6NNV3 312 aaPredicted RBP11.58□□□□□ -0.56
MS4A4A-205ENST00000529991 SCUBE2Q9NQ36 999 aa11.57□□□□□ -0.56
MS4A4A-205ENST00000529991 GRXCR2A6NFK2 248 aa11.56□□□□□ -0.56
MS4A4A-205ENST00000529991 RBM26Q5T8P6 1007 aaKnown RBP11.56□□□□□ -0.56
MS4A4A-205ENST00000529991 SMYD5Q6GMV2 418 aa11.56□□□□□ -0.56
MS4A4A-205ENST00000529991 WDR62O43379 1518 aa11.55□□□□□ -0.56
MS4A4A-205ENST00000529991 TBC1D12O60347 775 aa11.54□□□□□ -0.56
MS4A4A-205ENST00000529991 EVI5O60447 810 aa11.54□□□□□ -0.56
MS4A4A-205ENST00000529991 PTCD2Q8WV60 388 aaKnown RBP11.54□□□□□ -0.56
MS4A4A-205ENST00000529991 PRDM2Q13029 1718 aa11.53□□□□□ -0.56
MS4A4A-205ENST00000529991 DDX12PQ92771 950 aa11.53□□□□□ -0.56
MS4A4A-205ENST00000529991 URB2Q14146 1524 aaKnown RBP11.52□□□□□ -0.57
MS4A4A-205ENST00000529991 MAMSTRQ6ZN01 415 aa11.52□□□□□ -0.57
MS4A4A-205ENST00000529991 SLC34A2O95436 690 aa11.51□□□□□ -0.57
MS4A4A-205ENST00000529991 PCDHGA4Q9Y5G9 962 aa11.51□□□□□ -0.57
MS4A4A-205ENST00000529991 ZC3H15Q8WU90 426 aaKnown RBP11.49□□□□□ -0.57
MS4A4A-205ENST00000529991 HOXB3P14651 431 aaPredicted RBP11.48□□□□□ -0.57
MS4A4A-205ENST00000529991 KHSRPQ92945 711 aaKnown RBP eCLIP11.48□□□□□ -0.57
MS4A4A-205ENST00000529991 ABCC8Q09428 1581 aa11.47□□□□□ -0.57
MS4A4A-205ENST00000529991 TOPBP1Q92547 1522 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms