RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 FMN1Q68DA7 1419 aa26.76■■□□□ 1.87
COL16A1-216ENST00000529928 MLECQ14165 292 aa26.75■■□□□ 1.87
COL16A1-216ENST00000529928 FER1L4A9Z1Z3 1794 aa26.75■■□□□ 1.87
COL16A1-216ENST00000529928 EFCAB2Q5VUJ9 269 aa26.73■■□□□ 1.87
COL16A1-216ENST00000529928 CDK11AQ9UQ88 783 aaPredicted RBP26.73■■□□□ 1.87
COL16A1-216ENST00000529928 ATP1B4Q9UN42 357 aaPredicted RBP26.72■■□□□ 1.87
COL16A1-216ENST00000529928 MYO5CQ9NQX4 1742 aa26.72■■□□□ 1.87
COL16A1-216ENST00000529928 ATP10AO60312 1499 aa26.72■■□□□ 1.87
COL16A1-216ENST00000529928 C9orf84Q5VXU9 1444 aa26.71■■□□□ 1.87
COL16A1-216ENST00000529928 UBTFP17480 764 aaKnown RBP26.7■■□□□ 1.86
COL16A1-216ENST00000529928 ARHGEF12Q9NZN5 1544 aa26.69■■□□□ 1.86
COL16A1-216ENST00000529928 ARHGAP35Q9NRY4 1499 aa26.67■■□□□ 1.86
COL16A1-216ENST00000529928 KIF14Q15058 1648 aa26.66■■□□□ 1.86
COL16A1-216ENST00000529928 ZNF518AQ6AHZ1 1483 aa26.66■■□□□ 1.86
COL16A1-216ENST00000529928 EHMT2Q96KQ7 1210 aa26.63■■□□□ 1.85
COL16A1-216ENST00000529928 TROQ12816 1431 aaPredicted RBP26.63■■□□□ 1.85
COL16A1-216ENST00000529928 ARHGAP5Q13017 1502 aa26.61■■□□□ 1.85
COL16A1-216ENST00000529928 PREX1Q8TCU6 1659 aa26.61■■□□□ 1.85
COL16A1-216ENST00000529928 CERKQ8TCT0 537 aa26.61■■□□□ 1.85
COL16A1-216ENST00000529928 CLIP1P30622 1438 aa26.61■■□□□ 1.85
COL16A1-216ENST00000529928 KDM5CP41229 1560 aa26.6■■□□□ 1.85
COL16A1-216ENST00000529928 AFAP1Q8N556 730 aa26.56■■□□□ 1.84
COL16A1-216ENST00000529928 CEBPAP49715 358 aaPredicted RBP26.55■■□□□ 1.84
COL16A1-216ENST00000529928 MYT1LQ9UL68 1186 aa26.53■■□□□ 1.84
COL16A1-216ENST00000529928 REREQ9P2R6 1566 aa26.52■■□□□ 1.84
COL16A1-216ENST00000529928 DIP2CQ9Y2E4 1556 aa26.52■■□□□ 1.84
COL16A1-216ENST00000529928 LRRIQ1Q96JM4 1722 aa26.51■■□□□ 1.83
COL16A1-216ENST00000529928 UHRF1BP1Q6BDS2 1440 aa26.5■■□□□ 1.83
COL16A1-216ENST00000529928 DMRT2Q9Y5R5 561 aa26.5■■□□□ 1.83
COL16A1-216ENST00000529928 MLH3Q9UHC1 1453 aa26.49■■□□□ 1.83
COL16A1-216ENST00000529928 CDC42BPBQ9Y5S2 1711 aa26.48■■□□□ 1.83
COL16A1-216ENST00000529928 ABCA6Q8N139 1617 aa26.47■■□□□ 1.83
COL16A1-216ENST00000529928 PREX2Q70Z35 1606 aa26.46■■□□□ 1.83
COL16A1-216ENST00000529928 CCDC18Q5T9S5 1454 aa26.45■■□□□ 1.82
COL16A1-216ENST00000529928 SETD1BQ9UPS6 1966 aaKnown RBP26.44■■□□□ 1.82
COL16A1-216ENST00000529928 ABCC1P33527 1531 aa26.44■■□□□ 1.82
COL16A1-216ENST00000529928 STRCQ7RTU9 1775 aa26.43■■□□□ 1.82
COL16A1-216ENST00000529928 AGLP35573 1532 aa26.43■■□□□ 1.82
COL16A1-216ENST00000529928 CASKIN1Q8WXD9 1431 aa26.41■■□□□ 1.82
COL16A1-216ENST00000529928 TRAPPC8Q9Y2L5 1435 aa26.41■■□□□ 1.82
COL16A1-216ENST00000529928 ESF1Q9H501 851 aaKnown RBP26.41■■□□□ 1.82
COL16A1-216ENST00000529928 CHIC1Q5VXU3 224 aa26.4■■□□□ 1.82
COL16A1-216ENST00000529928 C3P01024 1663 aa26.4■■□□□ 1.82
COL16A1-216ENST00000529928 ITSN2Q9NZM3 1697 aa26.39■■□□□ 1.82
COL16A1-216ENST00000529928 PTPRTO14522 1441 aa26.35■■□□□ 1.81
COL16A1-216ENST00000529928 CNTLNQ9NXG0 1405 aa26.34■■□□□ 1.81
COL16A1-216ENST00000529928 KIDINS220Q9ULH0 1771 aa26.34■■□□□ 1.81
COL16A1-216ENST00000529928 CDC42BPAQ5VT25 1732 aa26.33■■□□□ 1.81
COL16A1-216ENST00000529928 FYCO1Q9BQS8 1478 aa26.3■■□□□ 1.8
COL16A1-216ENST00000529928 SAMD9LQ8IVG5 1584 aa26.28■■□□□ 1.8
COL16A1-216ENST00000529928 ZNF777Q9ULD5 760 aaPredicted RBP26.24■■□□□ 1.79
COL16A1-216ENST00000529928 SYCP2Q9BX26 1530 aa26.24■■□□□ 1.79
COL16A1-216ENST00000529928 NPATQ14207 1427 aa26.23■■□□□ 1.79
COL16A1-216ENST00000529928 NCOA1Q15788 1441 aa26.23■■□□□ 1.79
COL16A1-216ENST00000529928 MROH2AA6NES4 1674 aa26.23■■□□□ 1.79
COL16A1-216ENST00000529928 SPAG9O60271 1321 aaKnown RBP26.22■■□□□ 1.79
COL16A1-216ENST00000529928 GPATCH8Q9UKJ3 1502 aaKnown RBP26.22■■□□□ 1.79
COL16A1-216ENST00000529928 DISP3Q9P2K9 1392 aa26.21■■□□□ 1.79
COL16A1-216ENST00000529928 LTBP4Q8N2S1 1624 aa26.2■■□□□ 1.78
COL16A1-216ENST00000529928 IQSEC2Q5JU85 1478 aa26.18■■□□□ 1.78
COL16A1-216ENST00000529928 HNRNPMP52272 730 aaKnown RBP eCLIP26.18■■□□□ 1.78
COL16A1-216ENST00000529928 ZMYM3Q14202 1370 aa26.18■■□□□ 1.78
COL16A1-216ENST00000529928 KIAA1107Q9UPP5 1409 aa26.17■■□□□ 1.78
COL16A1-216ENST00000529928 ATP7AQ04656 1500 aa26.17■■□□□ 1.78
COL16A1-216ENST00000529928 PLEKHH2Q8IVE3 1493 aa26.17■■□□□ 1.78
COL16A1-216ENST00000529928 CAMSAP1Q5T5Y3 1602 aa26.16■■□□□ 1.78
COL16A1-216ENST00000529928 SUPT6HQ7KZ85 1726 aaKnown RBP26.16■■□□□ 1.78
COL16A1-216ENST00000529928 CFDP1Q9UEE9 299 aaPredicted RBP26.14■■□□□ 1.78
COL16A1-216ENST00000529928 INO80Q9ULG1 1556 aaPredicted RBP26.14■■□□□ 1.78
COL16A1-216ENST00000529928 PLXNC1O60486 1568 aa26.13■■□□□ 1.77
COL16A1-216ENST00000529928 CCNB3Q8WWL7 1395 aa26.12■■□□□ 1.77
COL16A1-216ENST00000529928 A2MP01023 1474 aa26.11■■□□□ 1.77
COL16A1-216ENST00000529928 CLTCQ00610 1675 aaKnown RBP26.1■■□□□ 1.77
COL16A1-216ENST00000529928 ILDR2Q71H61 639 aa26.1■■□□□ 1.77
COL16A1-216ENST00000529928 ZNF142P52746 1687 aaPredicted RBP26.07■■□□□ 1.76
COL16A1-216ENST00000529928 MTUS2Q5JR59 1369 aa26.07■■□□□ 1.76
COL16A1-216ENST00000529928 MYO3AQ8NEV4 1616 aa26.06■■□□□ 1.76
COL16A1-216ENST00000529928 PLA2R1Q13018 1463 aa26.06■■□□□ 1.76
COL16A1-216ENST00000529928 SPATA31D1Q6ZQQ2 1576 aa26.06■■□□□ 1.76
COL16A1-216ENST00000529928 GGT6Q6P531 493 aa26.05■■□□□ 1.76
COL16A1-216ENST00000529928 NCKAP5LQ9HCH0 1330 aa26.05■■□□□ 1.76
COL16A1-216ENST00000529928 PTPRKQ15262 1439 aa26.05■■□□□ 1.76
COL16A1-216ENST00000529928 CEP170BQ9Y4F5 1589 aaPredicted RBP26.04■■□□□ 1.76
COL16A1-216ENST00000529928 SOCS7O14512 581 aa26.04■■□□□ 1.76
COL16A1-216ENST00000529928 PKD2Q13563 968 aa26.04■■□□□ 1.76
COL16A1-216ENST00000529928 PPP6R1Q9UPN7 881 aa26.04■■□□□ 1.76
COL16A1-216ENST00000529928 ADGBQ8N7X0 1667 aa26.03■■□□□ 1.76
COL16A1-216ENST00000529928 ZNF335Q9H4Z2 1342 aaPredicted RBP26.01■■□□□ 1.75
COL16A1-216ENST00000529928 TCOF1Q13428 1488 aaKnown RBP26■■□□□ 1.75
COL16A1-216ENST00000529928 TIAM1Q13009 1591 aa25.98■■□□□ 1.75
COL16A1-216ENST00000529928 EHBP1L1Q8N3D4 1523 aa25.96■■□□□ 1.75
COL16A1-216ENST00000529928 MBD5Q9P267 1494 aa25.96■■□□□ 1.75
COL16A1-216ENST00000529928 RTEL1-TNFRSF6BF6WH68 1400 aa25.96■■□□□ 1.75
COL16A1-216ENST00000529928 ZNF644Q9H582 1327 aaPredicted RBP25.95■■□□□ 1.75
COL16A1-216ENST00000529928 UBAP1LF5GYI3 381 aa25.93■■□□□ 1.74
COL16A1-216ENST00000529928 A2ML1A8K2U0 1454 aa25.92■■□□□ 1.74
COL16A1-216ENST00000529928 CEP162Q5TB80 1403 aa25.91■■□□□ 1.74
COL16A1-216ENST00000529928 DHX29Q7Z478 1369 aaKnown RBP25.91■■□□□ 1.74
COL16A1-216ENST00000529928 DNMT1P26358 1616 aaKnown RBP25.88■■□□□ 1.73
COL16A1-216ENST00000529928 FAM135AQ9P2D6 1515 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms