RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 RANGAP1P46060 587 aaPredicted RBP6.07□□□□□ -1.44
PTPRC-213ENST00000529828 FRMPD1Q5SYB0 1578 aa6.06□□□□□ -1.44
PTPRC-213ENST00000529828 ABCA9Q8IUA7 1624 aa6.06□□□□□ -1.44
PTPRC-213ENST00000529828 PRXQ9BXM0 1461 aa6.06□□□□□ -1.44
PTPRC-213ENST00000529828 BCORL1Q5H9F3 1711 aa6.06□□□□□ -1.44
PTPRC-213ENST00000529828 RIMS1Q86UR5 1692 aaKnown RBP6.05□□□□□ -1.44
PTPRC-213ENST00000529828 NEO1Q92859 1461 aa6.04□□□□□ -1.44
PTPRC-213ENST00000529828 MLECQ14165 292 aa6.04□□□□□ -1.44
PTPRC-213ENST00000529828 SAMD1Q6SPF0 538 aaPredicted RBP6.04□□□□□ -1.44
PTPRC-213ENST00000529828 ARHGEF40Q8TER5 1519 aa6.03□□□□□ -1.44
PTPRC-213ENST00000529828 RAPGEF6Q8TEU7 1601 aa6.03□□□□□ -1.44
PTPRC-213ENST00000529828 PHLDB1Q86UU1 1377 aa6.03□□□□□ -1.44
PTPRC-213ENST00000529828 FAM9AQ8IZU1 332 aaPredicted RBP6.03□□□□□ -1.44
PTPRC-213ENST00000529828 FHOD3Q2V2M9 1422 aa6.02□□□□□ -1.45
PTPRC-213ENST00000529828 YEATS2Q9ULM3 1422 aa6.02□□□□□ -1.45
PTPRC-213ENST00000529828 DENND4BO75064 1496 aaPredicted RBP6.02□□□□□ -1.45
PTPRC-213ENST00000529828 NUP153P49790 1475 aaKnown RBP6.02□□□□□ -1.45
PTPRC-213ENST00000529828 SAMD9Q5K651 1589 aa6.02□□□□□ -1.45
PTPRC-213ENST00000529828 SIGLEC1Q9BZZ2 1709 aa6.02□□□□□ -1.45
PTPRC-213ENST00000529828 AKNAQ7Z591 1439 aa6.01□□□□□ -1.45
PTPRC-213ENST00000529828 FANCAO15360 1455 aa6.01□□□□□ -1.45
PTPRC-213ENST00000529828 CERKQ8TCT0 537 aa6□□□□□ -1.45
PTPRC-213ENST00000529828 RICTORQ6R327 1708 aa6□□□□□ -1.45
PTPRC-213ENST00000529828 TTC37Q6PGP7 1564 aa6□□□□□ -1.45
PTPRC-213ENST00000529828 ZFYVE16Q7Z3T8 1539 aa6□□□□□ -1.45
PTPRC-213ENST00000529828 ILDR2Q71H61 639 aa5.99□□□□□ -1.45
PTPRC-213ENST00000529828 POGZQ7Z3K3 1410 aa5.99□□□□□ -1.45
PTPRC-213ENST00000529828 DISP3Q9P2K9 1392 aa5.99□□□□□ -1.45
PTPRC-213ENST00000529828 PLEKHD1A6NEE1 506 aa5.99□□□□□ -1.45
PTPRC-213ENST00000529828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.99□□□□□ -1.45
PTPRC-213ENST00000529828 CEBPAP49715 358 aaPredicted RBP5.98□□□□□ -1.45
PTPRC-213ENST00000529828 CDK13Q14004 1512 aaKnown RBP5.98□□□□□ -1.45
PTPRC-213ENST00000529828 CSRNP3Q8WYN3 585 aa5.98□□□□□ -1.45
PTPRC-213ENST00000529828 HECW1Q76N89 1606 aa5.98□□□□□ -1.45
PTPRC-213ENST00000529828 FER1L4A9Z1Z3 1794 aa5.98□□□□□ -1.45
PTPRC-213ENST00000529828 EFCAB5A4FU69 1503 aa5.97□□□□□ -1.45
PTPRC-213ENST00000529828 ZMYM4Q5VZL5 1548 aa5.97□□□□□ -1.45
PTPRC-213ENST00000529828 EHMT2Q96KQ7 1210 aa5.97□□□□□ -1.45
PTPRC-213ENST00000529828 CFAP74Q9C0B2 1584 aa5.97□□□□□ -1.45
PTPRC-213ENST00000529828 SCAPERQ9BY12 1400 aa5.97□□□□□ -1.45
PTPRC-213ENST00000529828 ATP1B4Q9UN42 357 aaPredicted RBP5.96□□□□□ -1.46
PTPRC-213ENST00000529828 SLC4A2P04920 1241 aa5.95□□□□□ -1.46
PTPRC-213ENST00000529828 ARHGEF12Q9NZN5 1544 aa5.95□□□□□ -1.46
PTPRC-213ENST00000529828 MAGI2Q86UL8 1455 aa5.94□□□□□ -1.46
PTPRC-213ENST00000529828 C9orf84Q5VXU9 1444 aa5.94□□□□□ -1.46
PTPRC-213ENST00000529828 PREX1Q8TCU6 1659 aa5.94□□□□□ -1.46
PTPRC-213ENST00000529828 ATP10AO60312 1499 aa5.94□□□□□ -1.46
PTPRC-213ENST00000529828 SOCS7O14512 581 aa5.94□□□□□ -1.46
PTPRC-213ENST00000529828 AKT1S1Q96B36 256 aa5.94□□□□□ -1.46
PTPRC-213ENST00000529828 MYT1LQ9UL68 1186 aa5.94□□□□□ -1.46
PTPRC-213ENST00000529828 PLCH2O75038 1416 aa5.93□□□□□ -1.46
PTPRC-213ENST00000529828 UHRF1BP1Q6BDS2 1440 aa5.93□□□□□ -1.46
PTPRC-213ENST00000529828 SPATA31D1Q6ZQQ2 1576 aa5.93□□□□□ -1.46
PTPRC-213ENST00000529828 STRCQ7RTU9 1775 aa5.92□□□□□ -1.46
PTPRC-213ENST00000529828 AFAP1Q8N556 730 aa5.92□□□□□ -1.46
PTPRC-213ENST00000529828 KIF14Q15058 1648 aa5.92□□□□□ -1.46
PTPRC-213ENST00000529828 EFCAB2Q5VUJ9 269 aa5.92□□□□□ -1.46
PTPRC-213ENST00000529828 ARHGAP5Q13017 1502 aa5.91□□□□□ -1.46
PTPRC-213ENST00000529828 MYO5CQ9NQX4 1742 aa5.91□□□□□ -1.46
PTPRC-213ENST00000529828 DIP2CQ9Y2E4 1556 aa5.9□□□□□ -1.46
PTPRC-213ENST00000529828 ZNF518AQ6AHZ1 1483 aa5.9□□□□□ -1.46
PTPRC-213ENST00000529828 ABCA6Q8N139 1617 aa5.89□□□□□ -1.47
PTPRC-213ENST00000529828 EEA1Q15075 1411 aa5.89□□□□□ -1.47
PTPRC-213ENST00000529828 KDM5CP41229 1560 aa5.89□□□□□ -1.47
PTPRC-213ENST00000529828 C3P01024 1663 aa5.89□□□□□ -1.47
PTPRC-213ENST00000529828 ESF1Q9H501 851 aaKnown RBP5.88□□□□□ -1.47
PTPRC-213ENST00000529828 PTPRTO14522 1441 aa5.88□□□□□ -1.47
PTPRC-213ENST00000529828 TRAPPC8Q9Y2L5 1435 aa5.88□□□□□ -1.47
PTPRC-213ENST00000529828 LTBP4Q8N2S1 1624 aa5.88□□□□□ -1.47
PTPRC-213ENST00000529828 UBTFP17480 764 aaKnown RBP5.88□□□□□ -1.47
PTPRC-213ENST00000529828 ZBTB12Q9Y330 459 aaPredicted RBP5.88□□□□□ -1.47
PTPRC-213ENST00000529828 TROQ12816 1431 aaPredicted RBP5.88□□□□□ -1.47
PTPRC-213ENST00000529828 ARHGAP35Q9NRY4 1499 aa5.88□□□□□ -1.47
PTPRC-213ENST00000529828 HAX1O00165 279 aa5.87□□□□□ -1.47
PTPRC-213ENST00000529828 NCOA1Q15788 1441 aa5.87□□□□□ -1.47
PTPRC-213ENST00000529828 CLIP1P30622 1438 aa5.87□□□□□ -1.47
PTPRC-213ENST00000529828 FMN1Q68DA7 1419 aa5.87□□□□□ -1.47
PTPRC-213ENST00000529828 ZNF335Q9H4Z2 1342 aaPredicted RBP5.87□□□□□ -1.47
PTPRC-213ENST00000529828 NCKAP5LQ9HCH0 1330 aa5.87□□□□□ -1.47
PTPRC-213ENST00000529828 CDK11AQ9UQ88 783 aaPredicted RBP5.87□□□□□ -1.47
PTPRC-213ENST00000529828 POLA2Q14181 598 aa5.86□□□□□ -1.47
PTPRC-213ENST00000529828 CAMSAP1Q5T5Y3 1602 aa5.86□□□□□ -1.47
PTPRC-213ENST00000529828 REREQ9P2R6 1566 aa5.86□□□□□ -1.47
PTPRC-213ENST00000529828 ABCC1P33527 1531 aa5.86□□□□□ -1.47
PTPRC-213ENST00000529828 MLH3Q9UHC1 1453 aa5.86□□□□□ -1.47
PTPRC-213ENST00000529828 UBAP1LF5GYI3 381 aa5.86□□□□□ -1.47
PTPRC-213ENST00000529828 PIP4P2Q8N4L2 257 aa5.86□□□□□ -1.47
PTPRC-213ENST00000529828 LRRIQ1Q96JM4 1722 aa5.85□□□□□ -1.47
PTPRC-213ENST00000529828 ZNF777Q9ULD5 760 aaPredicted RBP5.85□□□□□ -1.47
PTPRC-213ENST00000529828 CDC42BPBQ9Y5S2 1711 aa5.85□□□□□ -1.47
PTPRC-213ENST00000529828 AGLP35573 1532 aa5.85□□□□□ -1.47
PTPRC-213ENST00000529828 SETD1BQ9UPS6 1966 aaKnown RBP5.84□□□□□ -1.47
PTPRC-213ENST00000529828 ITSN2Q9NZM3 1697 aa5.84□□□□□ -1.47
PTPRC-213ENST00000529828 PREX2Q70Z35 1606 aa5.84□□□□□ -1.47
PTPRC-213ENST00000529828 KIDINS220Q9ULH0 1771 aa5.84□□□□□ -1.47
PTPRC-213ENST00000529828 IQSEC2Q5JU85 1478 aa5.84□□□□□ -1.48
PTPRC-213ENST00000529828 CNTLNQ9NXG0 1405 aa5.83□□□□□ -1.48
PTPRC-213ENST00000529828 PCDH10Q9P2E7 1040 aa5.83□□□□□ -1.48
PTPRC-213ENST00000529828 ZMYM3Q14202 1370 aa5.83□□□□□ -1.48
PTPRC-213ENST00000529828 SYCP2Q9BX26 1530 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms