RNA–Protein interactions for RNA: ENST00000529640.5

UBXN1-210, Transcript of UBX domain protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBXN1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-210ENST00000529640 PREX1Q8TCU6 1659 aa28.46■■■□□ 2.15
UBXN1-210ENST00000529640 CDK13Q14004 1512 aaKnown RBP28.45■■■□□ 2.15
UBXN1-210ENST00000529640 PLCH2O75038 1416 aa28.44■■■□□ 2.14
UBXN1-210ENST00000529640 SCAPERQ9BY12 1400 aa28.44■■■□□ 2.14
UBXN1-210ENST00000529640 MLECQ14165 292 aa28.43■■■□□ 2.14
UBXN1-210ENST00000529640 ATP10AO60312 1499 aa28.41■■■□□ 2.14
UBXN1-210ENST00000529640 C9orf84Q5VXU9 1444 aa28.41■■■□□ 2.14
UBXN1-210ENST00000529640 MYO5CQ9NQX4 1742 aa28.4■■■□□ 2.14
UBXN1-210ENST00000529640 STRCQ7RTU9 1775 aa28.34■■■□□ 2.13
UBXN1-210ENST00000529640 SETD1BQ9UPS6 1966 aaKnown RBP28.3■■■□□ 2.12
UBXN1-210ENST00000529640 ZNF518AQ6AHZ1 1483 aa28.29■■■□□ 2.12
UBXN1-210ENST00000529640 EFCAB2Q5VUJ9 269 aa28.29■■■□□ 2.12
UBXN1-210ENST00000529640 KDM5CP41229 1560 aa28.28■■■□□ 2.12
UBXN1-210ENST00000529640 KIF14Q15058 1648 aa28.27■■■□□ 2.12
UBXN1-210ENST00000529640 CEBPAP49715 358 aaPredicted RBP28.25■■■□□ 2.11
UBXN1-210ENST00000529640 DMRT2Q9Y5R5 561 aa28.25■■■□□ 2.11
UBXN1-210ENST00000529640 UHRF1BP1Q6BDS2 1440 aa28.25■■■□□ 2.11
UBXN1-210ENST00000529640 FMN1Q68DA7 1419 aa28.24■■■□□ 2.11
UBXN1-210ENST00000529640 REREQ9P2R6 1566 aa28.24■■■□□ 2.11
UBXN1-210ENST00000529640 DIP2CQ9Y2E4 1556 aa28.22■■■□□ 2.11
UBXN1-210ENST00000529640 ARHGAP5Q13017 1502 aa28.21■■■□□ 2.11
UBXN1-210ENST00000529640 CDK11AQ9UQ88 783 aaPredicted RBP28.19■■■□□ 2.1
UBXN1-210ENST00000529640 DISP3Q9P2K9 1392 aa28.19■■■□□ 2.1
UBXN1-210ENST00000529640 C3P01024 1663 aa28.19■■■□□ 2.1
UBXN1-210ENST00000529640 TROQ12816 1431 aaPredicted RBP28.18■■■□□ 2.1
UBXN1-210ENST00000529640 ABCA6Q8N139 1617 aa28.17■■■□□ 2.1
UBXN1-210ENST00000529640 AFAP1Q8N556 730 aa28.15■■■□□ 2.1
UBXN1-210ENST00000529640 ATP1B4Q9UN42 357 aaPredicted RBP28.15■■■□□ 2.1
UBXN1-210ENST00000529640 PTPRTO14522 1441 aa28.15■■■□□ 2.1
UBXN1-210ENST00000529640 ARHGAP35Q9NRY4 1499 aa28.15■■■□□ 2.1
UBXN1-210ENST00000529640 ILDR2Q71H61 639 aa28.14■■■□□ 2.1
UBXN1-210ENST00000529640 CDC42BPBQ9Y5S2 1711 aa28.14■■■□□ 2.1
UBXN1-210ENST00000529640 LRRIQ1Q96JM4 1722 aa28.13■■■□□ 2.09
UBXN1-210ENST00000529640 CLIP1P30622 1438 aa28.13■■■□□ 2.09
UBXN1-210ENST00000529640 MLH3Q9UHC1 1453 aa28.13■■■□□ 2.09
UBXN1-210ENST00000529640 AGLP35573 1532 aa28.12■■■□□ 2.09
UBXN1-210ENST00000529640 SOCS7O14512 581 aa28.09■■■□□ 2.09
UBXN1-210ENST00000529640 SPATA31D1Q6ZQQ2 1576 aa28.08■■■□□ 2.09
UBXN1-210ENST00000529640 PREX2Q70Z35 1606 aa28.08■■■□□ 2.09
UBXN1-210ENST00000529640 MYT1LQ9UL68 1186 aa28.07■■■□□ 2.08
UBXN1-210ENST00000529640 ABCC1P33527 1531 aa28.07■■■□□ 2.08
UBXN1-210ENST00000529640 ITSN2Q9NZM3 1697 aa28.07■■■□□ 2.08
UBXN1-210ENST00000529640 LTBP4Q8N2S1 1624 aa28.06■■■□□ 2.08
UBXN1-210ENST00000529640 TRAPPC8Q9Y2L5 1435 aa28.04■■■□□ 2.08
UBXN1-210ENST00000529640 IQSEC2Q5JU85 1478 aa28.03■■■□□ 2.08
UBXN1-210ENST00000529640 UBTFP17480 764 aaKnown RBP28.03■■■□□ 2.08
UBXN1-210ENST00000529640 KIDINS220Q9ULH0 1771 aa28.02■■■□□ 2.08
UBXN1-210ENST00000529640 NCOA1Q15788 1441 aa28.01■■■□□ 2.07
UBXN1-210ENST00000529640 CNTLNQ9NXG0 1405 aa28.01■■■□□ 2.07
UBXN1-210ENST00000529640 ESF1Q9H501 851 aaKnown RBP28■■■□□ 2.07
UBXN1-210ENST00000529640 MROH2AA6NES4 1674 aa27.97■■■□□ 2.07
UBXN1-210ENST00000529640 CDC42BPAQ5VT25 1732 aa27.95■■■□□ 2.07
UBXN1-210ENST00000529640 EHMT2Q96KQ7 1210 aa27.95■■■□□ 2.06
UBXN1-210ENST00000529640 CCDC18Q5T9S5 1454 aa27.93■■■□□ 2.06
UBXN1-210ENST00000529640 NPATQ14207 1427 aa27.92■■■□□ 2.06
UBXN1-210ENST00000529640 CAMSAP1Q5T5Y3 1602 aa27.92■■■□□ 2.06
UBXN1-210ENST00000529640 SAMD9LQ8IVG5 1584 aa27.89■■■□□ 2.05
UBXN1-210ENST00000529640 CASKIN1Q8WXD9 1431 aa27.87■■■□□ 2.05
UBXN1-210ENST00000529640 ZNF142P52746 1687 aaPredicted RBP27.85■■■□□ 2.05
UBXN1-210ENST00000529640 SUPT6HQ7KZ85 1726 aaKnown RBP27.83■■■□□ 2.05
UBXN1-210ENST00000529640 ZMYM3Q14202 1370 aa27.81■■■□□ 2.04
UBXN1-210ENST00000529640 SYCP2Q9BX26 1530 aa27.81■■■□□ 2.04
UBXN1-210ENST00000529640 MYO3AQ8NEV4 1616 aa27.81■■■□□ 2.04
UBXN1-210ENST00000529640 CLTCQ00610 1675 aaKnown RBP27.8■■■□□ 2.04
UBXN1-210ENST00000529640 PLXNC1O60486 1568 aa27.78■■■□□ 2.04
UBXN1-210ENST00000529640 PLA2R1Q13018 1463 aa27.78■■■□□ 2.04
UBXN1-210ENST00000529640 ATP7AQ04656 1500 aa27.77■■■□□ 2.04
UBXN1-210ENST00000529640 INO80Q9ULG1 1556 aaPredicted RBP27.76■■■□□ 2.03
UBXN1-210ENST00000529640 FYCO1Q9BQS8 1478 aa27.76■■■□□ 2.03
UBXN1-210ENST00000529640 SPAG9O60271 1321 aaKnown RBP27.75■■■□□ 2.03
UBXN1-210ENST00000529640 ZNF335Q9H4Z2 1342 aaPredicted RBP27.75■■■□□ 2.03
UBXN1-210ENST00000529640 CEP170BQ9Y4F5 1589 aaPredicted RBP27.75■■■□□ 2.03
UBXN1-210ENST00000529640 NCKAP5LQ9HCH0 1330 aa27.74■■■□□ 2.03
UBXN1-210ENST00000529640 GPATCH8Q9UKJ3 1502 aaKnown RBP27.73■■■□□ 2.03
UBXN1-210ENST00000529640 TCOF1Q13428 1488 aaKnown RBP27.73■■■□□ 2.03
UBXN1-210ENST00000529640 PKD2Q13563 968 aa27.72■■■□□ 2.03
UBXN1-210ENST00000529640 PTPRKQ15262 1439 aa27.71■■■□□ 2.03
UBXN1-210ENST00000529640 ZNF777Q9ULD5 760 aaPredicted RBP27.71■■■□□ 2.03
UBXN1-210ENST00000529640 A2MP01023 1474 aa27.7■■■□□ 2.03
UBXN1-210ENST00000529640 KIAA1107Q9UPP5 1409 aa27.7■■■□□ 2.03
UBXN1-210ENST00000529640 UBAP1LF5GYI3 381 aa27.7■■■□□ 2.02
UBXN1-210ENST00000529640 PLEKHH2Q8IVE3 1493 aa27.69■■■□□ 2.02
UBXN1-210ENST00000529640 HNRNPMP52272 730 aaKnown RBP eCLIP27.67■■■□□ 2.02
UBXN1-210ENST00000529640 ADGBQ8N7X0 1667 aa27.65■■■□□ 2.02
UBXN1-210ENST00000529640 PPP6R1Q9UPN7 881 aa27.6■■■□□ 2.01
UBXN1-210ENST00000529640 A2ML1A8K2U0 1454 aa27.59■■■□□ 2.01
UBXN1-210ENST00000529640 CFDP1Q9UEE9 299 aaPredicted RBP27.59■■■□□ 2.01
UBXN1-210ENST00000529640 DNMT1P26358 1616 aaKnown RBP27.59■■■□□ 2.01
UBXN1-210ENST00000529640 GGT6Q6P531 493 aa27.58■■■□□ 2.01
UBXN1-210ENST00000529640 POLR1AO95602 1720 aaPredicted RBP27.58■■■□□ 2.01
UBXN1-210ENST00000529640 CHIC1Q5VXU3 224 aa27.57■■■□□ 2
UBXN1-210ENST00000529640 CCNB3Q8WWL7 1395 aa27.57■■■□□ 2
UBXN1-210ENST00000529640 NEURL4Q96JN8 1562 aa27.52■■■□□ 2
UBXN1-210ENST00000529640 CPS1P31327 1500 aa27.51■■■□□ 2
UBXN1-210ENST00000529640 MED1Q15648 1581 aaPredicted RBP27.51■■□□□ 1.99
UBXN1-210ENST00000529640 TIAM1Q13009 1591 aa27.49■■□□□ 1.99
UBXN1-210ENST00000529640 MBD5Q9P267 1494 aa27.48■■□□□ 1.99
UBXN1-210ENST00000529640 RTEL1-TNFRSF6BF6WH68 1400 aa27.47■■□□□ 1.99
UBXN1-210ENST00000529640 MTUS2Q5JR59 1369 aa27.47■■□□□ 1.99
UBXN1-210ENST00000529640 FAM135AQ9P2D6 1515 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms