RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 RIMS1Q86UR5 1692 aaKnown RBP15.16■□□□□ 0.02
VPS11-203ENST00000529545 CFAP74Q9C0B2 1584 aa15.15■□□□□ 0.02
VPS11-203ENST00000529545 RNF39Q9H2S5 420 aa15.15■□□□□ 0.02
VPS11-203ENST00000529545 AKNAQ7Z591 1439 aa15.14■□□□□ 0.01
VPS11-203ENST00000529545 RICTORQ6R327 1708 aa15.13■□□□□ 0.01
VPS11-203ENST00000529545 FANCAO15360 1455 aa15.13■□□□□ 0.01
VPS11-203ENST00000529545 FHOD3Q2V2M9 1422 aa15.11■□□□□ 0.01
VPS11-203ENST00000529545 HSPA2P54652 639 aa15.1■□□□□ 0.01
VPS11-203ENST00000529545 EFCAB5A4FU69 1503 aa15.1■□□□□ 0.01
VPS11-203ENST00000529545 ZFYVE16Q7Z3T8 1539 aa15.09■□□□□ 0.01
VPS11-203ENST00000529545 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.08■□□□□ 0.01
VPS11-203ENST00000529545 EEA1Q15075 1411 aa15.08■□□□□ 0
VPS11-203ENST00000529545 MAGI2Q86UL8 1455 aa15.08■□□□□ 0
VPS11-203ENST00000529545 ZMYM4Q5VZL5 1548 aa15.07■□□□□ 0
VPS11-203ENST00000529545 MLECQ14165 292 aa15.07■□□□□ 0
VPS11-203ENST00000529545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.05■□□□□ -09e-6■■■□□ 18.9
VPS11-203ENST00000529545 TTC37Q6PGP7 1564 aa15.05■□□□□ -0
VPS11-203ENST00000529545 FER1L4A9Z1Z3 1794 aa15.04■□□□□ -0
VPS11-203ENST00000529545 YEATS2Q9ULM3 1422 aa15.04■□□□□ -0
VPS11-203ENST00000529545 CERKQ8TCT0 537 aa15.04■□□□□ -0
VPS11-203ENST00000529545 CACNB1Q02641 598 aaPredicted RBP15.03■□□□□ -0
VPS11-203ENST00000529545 HECW1Q76N89 1606 aa15.03■□□□□ -0
VPS11-203ENST00000529545 SCAPERQ9BY12 1400 aa15.02■□□□□ -0
VPS11-203ENST00000529545 C1QBPQ07021 282 aaKnown RBP15.01□□□□□ -0.01
VPS11-203ENST00000529545 PLCH2O75038 1416 aa15□□□□□ -0.01
VPS11-203ENST00000529545 ATP1B4Q9UN42 357 aaPredicted RBP15□□□□□ -0.01
VPS11-203ENST00000529545 ATP10AO60312 1499 aa15□□□□□ -0.01
VPS11-203ENST00000529545 SIGLEC1Q9BZZ2 1709 aa15□□□□□ -0.01
VPS11-203ENST00000529545 CDK13Q14004 1512 aaKnown RBP14.99□□□□□ -0.01
VPS11-203ENST00000529545 EFCAB2Q5VUJ9 269 aa14.99□□□□□ -0.01
VPS11-203ENST00000529545 CDK11AQ9UQ88 783 aaPredicted RBP14.98□□□□□ -0.01
VPS11-203ENST00000529545 C9orf84Q5VXU9 1444 aa14.98□□□□□ -0.01
VPS11-203ENST00000529545 PREX1Q8TCU6 1659 aa14.97□□□□□ -0.01
VPS11-203ENST00000529545 MYO5CQ9NQX4 1742 aa14.96□□□□□ -0.01
VPS11-203ENST00000529545 MYT1LQ9UL68 1186 aa14.96□□□□□ -0.01
VPS11-203ENST00000529545 ARHGEF12Q9NZN5 1544 aa14.96□□□□□ -0.02
VPS11-203ENST00000529545 FMN1Q68DA7 1419 aa14.94□□□□□ -0.02
VPS11-203ENST00000529545 CEBPAP49715 358 aaPredicted RBP14.93□□□□□ -0.02
VPS11-203ENST00000529545 UBTFP17480 764 aaKnown RBP14.92□□□□□ -0.02
VPS11-203ENST00000529545 ZNF518AQ6AHZ1 1483 aa14.92□□□□□ -0.02
VPS11-203ENST00000529545 KIF14Q15058 1648 aa14.91□□□□□ -0.02
VPS11-203ENST00000529545 UHRF1BP1Q6BDS2 1440 aa14.91□□□□□ -0.02
VPS11-203ENST00000529545 ESF1Q9H501 851 aaKnown RBP14.9□□□□□ -0.02
VPS11-203ENST00000529545 SETD1BQ9UPS6 1966 aaKnown RBP14.9□□□□□ -0.02
VPS11-203ENST00000529545 ARHGAP5Q13017 1502 aa14.9□□□□□ -0.02
VPS11-203ENST00000529545 CLIP1P30622 1438 aa14.89□□□□□ -0.03
VPS11-203ENST00000529545 DISP3Q9P2K9 1392 aa14.88□□□□□ -0.03
VPS11-203ENST00000529545 AFAP1Q8N556 730 aa14.88□□□□□ -0.03
VPS11-203ENST00000529545 EHMT2Q96KQ7 1210 aa14.88□□□□□ -0.03
VPS11-203ENST00000529545 TROQ12816 1431 aaPredicted RBP14.87□□□□□ -0.03
VPS11-203ENST00000529545 KDM5CP41229 1560 aa14.86□□□□□ -0.03
VPS11-203ENST00000529545 STRCQ7RTU9 1775 aa14.86□□□□□ -0.03
VPS11-203ENST00000529545 REREQ9P2R6 1566 aa14.84□□□□□ -0.03
VPS11-203ENST00000529545 ARHGAP35Q9NRY4 1499 aa14.83□□□□□ -0.03
VPS11-203ENST00000529545 DIP2CQ9Y2E4 1556 aa14.83□□□□□ -0.04
VPS11-203ENST00000529545 PTPRTO14522 1441 aa14.83□□□□□ -0.04
VPS11-203ENST00000529545 C3P01024 1663 aa14.82□□□□□ -0.04
VPS11-203ENST00000529545 MLH3Q9UHC1 1453 aa14.82□□□□□ -0.04
VPS11-203ENST00000529545 CDC42BPBQ9Y5S2 1711 aa14.8□□□□□ -0.04
VPS11-203ENST00000529545 SOCS7O14512 581 aa14.8□□□□□ -0.04
VPS11-203ENST00000529545 ABCA6Q8N139 1617 aa14.8□□□□□ -0.04
VPS11-203ENST00000529545 AGLP35573 1532 aa14.79□□□□□ -0.04
VPS11-203ENST00000529545 ILDR2Q71H61 639 aa14.79□□□□□ -0.04
VPS11-203ENST00000529545 TRAPPC8Q9Y2L5 1435 aa14.79□□□□□ -0.04
VPS11-203ENST00000529545 CNTLNQ9NXG0 1405 aa14.78□□□□□ -0.04
VPS11-203ENST00000529545 PREX2Q70Z35 1606 aa14.77□□□□□ -0.04
VPS11-203ENST00000529545 LRRIQ1Q96JM4 1722 aa14.77□□□□□ -0.05
VPS11-203ENST00000529545 ABCC1P33527 1531 aa14.76□□□□□ -0.05
VPS11-203ENST00000529545 ITSN2Q9NZM3 1697 aa14.76□□□□□ -0.05
VPS11-203ENST00000529545 CCDC18Q5T9S5 1454 aa14.76□□□□□ -0.05
VPS11-203ENST00000529545 SPATA31D1Q6ZQQ2 1576 aa14.75□□□□□ -0.05
VPS11-203ENST00000529545 IQSEC2Q5JU85 1478 aa14.75□□□□□ -0.05
VPS11-203ENST00000529545 KIDINS220Q9ULH0 1771 aa14.73□□□□□ -0.05
VPS11-203ENST00000529545 U3KPZ7 1027 aaPredicted RBP14.73□□□□□ -0.05
VPS11-203ENST00000529545 NCOA1Q15788 1441 aa14.73□□□□□ -0.05
VPS11-203ENST00000529545 SLC4A2P04920 1241 aa14.72□□□□□ -0.05
VPS11-203ENST00000529545 ZNF777Q9ULD5 760 aaPredicted RBP14.72□□□□□ -0.05
VPS11-203ENST00000529545 LTBP4Q8N2S1 1624 aa14.72□□□□□ -0.05
VPS11-203ENST00000529545 NPATQ14207 1427 aa14.72□□□□□ -0.05
VPS11-203ENST00000529545 CASKIN1Q8WXD9 1431 aa14.72□□□□□ -0.05
VPS11-203ENST00000529545 CDC42BPAQ5VT25 1732 aa14.71□□□□□ -0.05
VPS11-203ENST00000529545 MROH2AA6NES4 1674 aa14.71□□□□□ -0.06
VPS11-203ENST00000529545 CAMSAP1Q5T5Y3 1602 aa14.7□□□□□ -0.06
VPS11-203ENST00000529545 SPAG9O60271 1321 aaKnown RBP14.69□□□□□ -0.06
VPS11-203ENST00000529545 ZMYM3Q14202 1370 aa14.69□□□□□ -0.06
VPS11-203ENST00000529545 SAMD9LQ8IVG5 1584 aa14.68□□□□□ -0.06
VPS11-203ENST00000529545 SLC4A1APQ9BWU0 796 aaKnown RBP14.68□□□□□ -0.06
VPS11-203ENST00000529545 SUPT6HQ7KZ85 1726 aaKnown RBP14.67□□□□□ -0.06
VPS11-203ENST00000529545 NCKAP5LQ9HCH0 1330 aa14.66□□□□□ -0.06
VPS11-203ENST00000529545 UBAP1LF5GYI3 381 aa14.66□□□□□ -0.06
VPS11-203ENST00000529545 PKD2Q13563 968 aa14.66□□□□□ -0.06
VPS11-203ENST00000529545 HNRNPMP52272 730 aaKnown RBP eCLIP14.65□□□□□ -0.06
VPS11-203ENST00000529545 SYCP2Q9BX26 1530 aa14.65□□□□□ -0.06
VPS11-203ENST00000529545 PLEKHH2Q8IVE3 1493 aa14.64□□□□□ -0.07
VPS11-203ENST00000529545 FYCO1Q9BQS8 1478 aa14.64□□□□□ -0.07
VPS11-203ENST00000529545 CLTCQ00610 1675 aaKnown RBP14.64□□□□□ -0.07
VPS11-203ENST00000529545 ATP7AQ04656 1500 aa14.63□□□□□ -0.07
VPS11-203ENST00000529545 CFDP1Q9UEE9 299 aaPredicted RBP14.63□□□□□ -0.07
VPS11-203ENST00000529545 ZNF335Q9H4Z2 1342 aaPredicted RBP14.63□□□□□ -0.07
VPS11-203ENST00000529545 GPATCH8Q9UKJ3 1502 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms