RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 ARHGEF40Q8TER5 1519 aa10.34□□□□□ -0.75
CHRNA6-202ENST00000529467 TTC37Q6PGP7 1564 aa10.34□□□□□ -0.75
CHRNA6-202ENST00000529467 RIMS1Q86UR5 1692 aaKnown RBP10.34□□□□□ -0.75
CHRNA6-202ENST00000529467 YEATS2Q9ULM3 1422 aa10.33□□□□□ -0.76
CHRNA6-202ENST00000529467 EFCAB5A4FU69 1503 aa10.33□□□□□ -0.76
CHRNA6-202ENST00000529467 CFAP74Q9C0B2 1584 aa10.33□□□□□ -0.76
CHRNA6-202ENST00000529467 SIGLEC1Q9BZZ2 1709 aa10.33□□□□□ -0.76
CHRNA6-202ENST00000529467 ZMYM4Q5VZL5 1548 aa10.33□□□□□ -0.76
CHRNA6-202ENST00000529467 PLCH2O75038 1416 aa10.33□□□□□ -0.76
CHRNA6-202ENST00000529467 MAGI2Q86UL8 1455 aa10.32□□□□□ -0.76
CHRNA6-202ENST00000529467 HSPA2P54652 639 aa10.32□□□□□ -0.76
CHRNA6-202ENST00000529467 CDK13Q14004 1512 aaKnown RBP10.32□□□□□ -0.76
CHRNA6-202ENST00000529467 POGZQ7Z3K3 1410 aa10.32□□□□□ -0.76
CHRNA6-202ENST00000529467 SCAPERQ9BY12 1400 aa10.32□□□□□ -0.76
CHRNA6-202ENST00000529467 HECW1Q76N89 1606 aa10.31□□□□□ -0.76
CHRNA6-202ENST00000529467 ZFYVE16Q7Z3T8 1539 aa10.31□□□□□ -0.76
CHRNA6-202ENST00000529467 MLECQ14165 292 aa10.3□□□□□ -0.76
CHRNA6-202ENST00000529467 EFCAB2Q5VUJ9 269 aa10.29□□□□□ -0.76
CHRNA6-202ENST00000529467 UBTFP17480 764 aaKnown RBP10.28□□□□□ -0.76
CHRNA6-202ENST00000529467 ATP1B4Q9UN42 357 aaPredicted RBP10.28□□□□□ -0.76
CHRNA6-202ENST00000529467 ATP10AO60312 1499 aa10.28□□□□□ -0.76
CHRNA6-202ENST00000529467 EHMT2Q96KQ7 1210 aa10.27□□□□□ -0.77
CHRNA6-202ENST00000529467 CDK11AQ9UQ88 783 aaPredicted RBP10.27□□□□□ -0.77
CHRNA6-202ENST00000529467 ARHGAP35Q9NRY4 1499 aa10.27□□□□□ -0.77
CHRNA6-202ENST00000529467 FMN1Q68DA7 1419 aa10.26□□□□□ -0.77
CHRNA6-202ENST00000529467 DCAF8L1A6NGE4 600 aa10.26□□□□□ -0.77
CHRNA6-202ENST00000529467 RNF39Q9H2S5 420 aa10.26□□□□□ -0.77
CHRNA6-202ENST00000529467 FER1L4A9Z1Z3 1794 aa10.26□□□□□ -0.77
CHRNA6-202ENST00000529467 MYO5CQ9NQX4 1742 aa10.25□□□□□ -0.77
CHRNA6-202ENST00000529467 ARHGEF12Q9NZN5 1544 aa10.25□□□□□ -0.77
CHRNA6-202ENST00000529467 CEBPAP49715 358 aaPredicted RBP10.25□□□□□ -0.77
CHRNA6-202ENST00000529467 CACNB1Q02641 598 aaPredicted RBP10.25□□□□□ -0.77
CHRNA6-202ENST00000529467 AFAP1Q8N556 730 aa10.25□□□□□ -0.77
CHRNA6-202ENST00000529467 SETD1BQ9UPS6 1966 aaKnown RBP10.25□□□□□ -0.77
CHRNA6-202ENST00000529467 C9orf84Q5VXU9 1444 aa10.24□□□□□ -0.77
CHRNA6-202ENST00000529467 CERKQ8TCT0 537 aa10.24□□□□□ -0.77
CHRNA6-202ENST00000529467 KIF14Q15058 1648 aa10.23□□□□□ -0.77
CHRNA6-202ENST00000529467 TROQ12816 1431 aaPredicted RBP10.23□□□□□ -0.77
CHRNA6-202ENST00000529467 ZNF518AQ6AHZ1 1483 aa10.22□□□□□ -0.77
CHRNA6-202ENST00000529467 LRRIQ1Q96JM4 1722 aa10.21□□□□□ -0.77
CHRNA6-202ENST00000529467 KDM5CP41229 1560 aa10.21□□□□□ -0.78
CHRNA6-202ENST00000529467 CDC42BPBQ9Y5S2 1711 aa10.21□□□□□ -0.78
CHRNA6-202ENST00000529467 ARHGAP5Q13017 1502 aa10.2□□□□□ -0.78
CHRNA6-202ENST00000529467 PREX1Q8TCU6 1659 aa10.2□□□□□ -0.78
CHRNA6-202ENST00000529467 CLIP1P30622 1438 aa10.19□□□□□ -0.78
CHRNA6-202ENST00000529467 MYT1LQ9UL68 1186 aa10.19□□□□□ -0.78
CHRNA6-202ENST00000529467 STRCQ7RTU9 1775 aa10.19□□□□□ -0.78
CHRNA6-202ENST00000529467 MLH3Q9UHC1 1453 aa10.18□□□□□ -0.78
CHRNA6-202ENST00000529467 REREQ9P2R6 1566 aa10.18□□□□□ -0.78
CHRNA6-202ENST00000529467 DIP2CQ9Y2E4 1556 aa10.18□□□□□ -0.78
CHRNA6-202ENST00000529467 TRAPPC8Q9Y2L5 1435 aa10.17□□□□□ -0.78
CHRNA6-202ENST00000529467 NCBP3Q53F19 620 aaKnown RBP10.17□□□□□ -0.78
CHRNA6-202ENST00000529467 UHRF1BP1Q6BDS2 1440 aa10.16□□□□□ -0.78
CHRNA6-202ENST00000529467 CASKIN1Q8WXD9 1431 aa10.16□□□□□ -0.78
CHRNA6-202ENST00000529467 ABCA6Q8N139 1617 aa10.15□□□□□ -0.78
CHRNA6-202ENST00000529467 AGLP35573 1532 aa10.15□□□□□ -0.78
CHRNA6-202ENST00000529467 C3P01024 1663 aa10.15□□□□□ -0.79
CHRNA6-202ENST00000529467 PREX2Q70Z35 1606 aa10.14□□□□□ -0.79
CHRNA6-202ENST00000529467 KIDINS220Q9ULH0 1771 aa10.14□□□□□ -0.79
CHRNA6-202ENST00000529467 ABCC1P33527 1531 aa10.13□□□□□ -0.79
CHRNA6-202ENST00000529467 ITSN2Q9NZM3 1697 aa10.13□□□□□ -0.79
CHRNA6-202ENST00000529467 CCDC18Q5T9S5 1454 aa10.13□□□□□ -0.79
CHRNA6-202ENST00000529467 ESF1Q9H501 851 aaKnown RBP10.13□□□□□ -0.79
CHRNA6-202ENST00000529467 PTPRTO14522 1441 aa10.13□□□□□ -0.79
CHRNA6-202ENST00000529467 CDC42BPAQ5VT25 1732 aa10.13□□□□□ -0.79
CHRNA6-202ENST00000529467 C1QBPQ07021 282 aaKnown RBP10.12□□□□□ -0.79
CHRNA6-202ENST00000529467 CNTLNQ9NXG0 1405 aa10.1□□□□□ -0.79
CHRNA6-202ENST00000529467 HNRNPMP52272 730 aaKnown RBP eCLIP10.1□□□□□ -0.79
CHRNA6-202ENST00000529467 ZNF777Q9ULD5 760 aaPredicted RBP10.1□□□□□ -0.79
CHRNA6-202ENST00000529467 GPATCH8Q9UKJ3 1502 aaKnown RBP10.1□□□□□ -0.79
CHRNA6-202ENST00000529467 SAMD9LQ8IVG5 1584 aa10.09□□□□□ -0.79
CHRNA6-202ENST00000529467 ZMYM3Q14202 1370 aa10.09□□□□□ -0.79
CHRNA6-202ENST00000529467 LTBP4Q8N2S1 1624 aa10.08□□□□□ -0.8
CHRNA6-202ENST00000529467 FYCO1Q9BQS8 1478 aa10.08□□□□□ -0.8
CHRNA6-202ENST00000529467 SPAG9O60271 1321 aaKnown RBP10.07□□□□□ -0.8
CHRNA6-202ENST00000529467 NCOA1Q15788 1441 aa10.07□□□□□ -0.8
CHRNA6-202ENST00000529467 ILDR2Q71H61 639 aa10.07□□□□□ -0.8
CHRNA6-202ENST00000529467 NPATQ14207 1427 aa10.07□□□□□ -0.8
CHRNA6-202ENST00000529467 KIAA1107Q9UPP5 1409 aa10.07□□□□□ -0.8
CHRNA6-202ENST00000529467 CFDP1Q9UEE9 299 aaPredicted RBP10.06□□□□□ -0.8
CHRNA6-202ENST00000529467 SUPT6HQ7KZ85 1726 aaKnown RBP10.06□□□□□ -0.8
CHRNA6-202ENST00000529467 SYCP2Q9BX26 1530 aa10.06□□□□□ -0.8
CHRNA6-202ENST00000529467 MROH2AA6NES4 1674 aa10.06□□□□□ -0.8
CHRNA6-202ENST00000529467 DISP3Q9P2K9 1392 aa10.05□□□□□ -0.8
CHRNA6-202ENST00000529467 NCKAP5LQ9HCH0 1330 aa10.05□□□□□ -0.8
CHRNA6-202ENST00000529467 CAMSAP1Q5T5Y3 1602 aa10.04□□□□□ -0.8
CHRNA6-202ENST00000529467 A2MP01023 1474 aa10.04□□□□□ -0.8
CHRNA6-202ENST00000529467 CCNB3Q8WWL7 1395 aa10.03□□□□□ -0.8
CHRNA6-202ENST00000529467 ATP7AQ04656 1500 aa10.03□□□□□ -0.8
CHRNA6-202ENST00000529467 NPM3O75607 178 aaKnown RBP10.03□□□□□ -0.8
CHRNA6-202ENST00000529467 GGT6Q6P531 493 aa10.03□□□□□ -0.8
CHRNA6-202ENST00000529467 IQSEC2Q5JU85 1478 aa10.03□□□□□ -0.8
CHRNA6-202ENST00000529467 PLEKHH2Q8IVE3 1493 aa10.03□□□□□ -0.8
CHRNA6-202ENST00000529467 CLTCQ00610 1675 aaKnown RBP10.02□□□□□ -0.8
CHRNA6-202ENST00000529467 PLXNC1O60486 1568 aa10.02□□□□□ -0.81
CHRNA6-202ENST00000529467 PTPRKQ15262 1439 aa10.02□□□□□ -0.81
CHRNA6-202ENST00000529467 ZNF644Q9H582 1327 aaPredicted RBP10.02□□□□□ -0.81
CHRNA6-202ENST00000529467 INO80Q9ULG1 1556 aaPredicted RBP10.01□□□□□ -0.81
CHRNA6-202ENST00000529467 SOCS7O14512 581 aa10.01□□□□□ -0.81
CHRNA6-202ENST00000529467 PKD2Q13563 968 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms