RNA–Protein interactions for RNA: ENST00000528870.5

TRIM29-210, Transcript of tripartite motif containing 29, humanhuman

TSL 2 BASIC

Gene TRIM29, Length 2,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-210ENST00000528870 CDK11AQ9UQ88 783 aaPredicted RBP21.29■■□□□ 1
TRIM29-210ENST00000528870 DNMT1P26358 1616 aaKnown RBP21.29■■□□□ 1
TRIM29-210ENST00000528870 RAPGEF6Q8TEU7 1601 aa21.29■■□□□ 1
TRIM29-210ENST00000528870 FOXD1Q16676 465 aa21.29■■□□□ 1
TRIM29-210ENST00000528870 L3MBTL2Q969R5 705 aa21.28■■□□□ 1
TRIM29-210ENST00000528870 GRIN2AQ12879 1464 aa21.28■■□□□ 1
TRIM29-210ENST00000528870 ABCC5O15440 1437 aa21.28■■□□□ 1
TRIM29-210ENST00000528870 ZNF644Q9H582 1327 aaPredicted RBP21.25■□□□□ 0.99
TRIM29-210ENST00000528870 EIF4G3O43432 1585 aaKnown RBP21.25■□□□□ 0.99
TRIM29-210ENST00000528870 ANKRD30BQ9BXX2 1392 aa21.23■□□□□ 0.99
TRIM29-210ENST00000528870 RPRD2Q5VT52 1461 aaKnown RBP21.23■□□□□ 0.99
TRIM29-210ENST00000528870 SLC4A1APQ9BWU0 796 aaKnown RBP21.2■□□□□ 0.98
TRIM29-210ENST00000528870 CNTLNQ9NXG0 1405 aa21.2■□□□□ 0.98
TRIM29-210ENST00000528870 HNRNPUQ00839 825 aaKnown RBP eCLIP21.19■□□□□ 0.98
TRIM29-210ENST00000528870 TROQ12816 1431 aaPredicted RBP21.18■□□□□ 0.98
TRIM29-210ENST00000528870 PRG4Q92954 1404 aaPredicted RBP21.18■□□□□ 0.98
TRIM29-210ENST00000528870 TEX14Q8IWB6 1497 aa21.17■□□□□ 0.98
TRIM29-210ENST00000528870 NCOA1Q15788 1441 aa21.16■□□□□ 0.98
TRIM29-210ENST00000528870 CAMSAP2Q08AD1 1489 aa21.16■□□□□ 0.98
TRIM29-210ENST00000528870 CFDP1Q9UEE9 299 aaPredicted RBP21.16■□□□□ 0.98
TRIM29-210ENST00000528870 MAGI1Q96QZ7 1491 aaPredicted RBP21.16■□□□□ 0.98
TRIM29-210ENST00000528870 ITSN2Q9NZM3 1697 aa21.15■□□□□ 0.98
TRIM29-210ENST00000528870 CHMP7Q8WUX9 453 aaPredicted RBP21.15■□□□□ 0.98
TRIM29-210ENST00000528870 CCDC7Q96M83 1385 aa21.15■□□□□ 0.98
TRIM29-210ENST00000528870 NBPF8Q3BBV2 869 aa21.14■□□□□ 0.97
TRIM29-210ENST00000528870 PLB1Q6P1J6 1458 aa21.13■□□□□ 0.97
TRIM29-210ENST00000528870 CEP170Q5SW79 1584 aa21.13■□□□□ 0.97
TRIM29-210ENST00000528870 C11orf95C9JLR9 678 aaPredicted RBP21.12■□□□□ 0.97
TRIM29-210ENST00000528870 SYNJ2O15056 1496 aa21.12■□□□□ 0.97
TRIM29-210ENST00000528870 GPATCH8Q9UKJ3 1502 aaKnown RBP21.11■□□□□ 0.97
TRIM29-210ENST00000528870 ADGBQ8N7X0 1667 aa21.11■□□□□ 0.97
TRIM29-210ENST00000528870 PZPP20742 1482 aa21.1■□□□□ 0.97
TRIM29-210ENST00000528870 ZNF777Q9ULD5 760 aaPredicted RBP21.09■□□□□ 0.97
TRIM29-210ENST00000528870 ADCY10Q96PN6 1610 aa21.09■□□□□ 0.97
TRIM29-210ENST00000528870 CARMIL2Q6F5E8 1435 aa21.09■□□□□ 0.97
TRIM29-210ENST00000528870 FBLN2P98095 1184 aa21.09■□□□□ 0.97
TRIM29-210ENST00000528870 KIF14Q15058 1648 aa21.09■□□□□ 0.97
TRIM29-210ENST00000528870 PRKRIP1Q9H875 184 aaPredicted RBP21.07■□□□□ 0.96
TRIM29-210ENST00000528870 SPATA31E1Q6ZUB1 1445 aa21.06■□□□□ 0.96
TRIM29-210ENST00000528870 ADGRL2O95490 1459 aa21.06■□□□□ 0.96
TRIM29-210ENST00000528870 CROCC2H7BZ55 1655 aa21.05■□□□□ 0.96
TRIM29-210ENST00000528870 KIF7Q2M1P5 1343 aa21.04■□□□□ 0.96
TRIM29-210ENST00000528870 ANKRD30AQ9BXX3 1397 aa21.04■□□□□ 0.96
TRIM29-210ENST00000528870 CCDC184Q52MB2 194 aa21.04■□□□□ 0.96
TRIM29-210ENST00000528870 KIAA1107Q9UPP5 1409 aa21.03■□□□□ 0.96
TRIM29-210ENST00000528870 JPH4Q96JJ6 628 aa21.03■□□□□ 0.96
TRIM29-210ENST00000528870 POLR1AO95602 1720 aaPredicted RBP21.03■□□□□ 0.96
TRIM29-210ENST00000528870 NUP160Q12769 1436 aa21.01■□□□□ 0.95
TRIM29-210ENST00000528870 MRS2Q9HD23 443 aa21.01■□□□□ 0.95
TRIM29-210ENST00000528870 PKD2Q13563 968 aa20.99■□□□□ 0.95
TRIM29-210ENST00000528870 FAM9BQ8IZU0 186 aa20.99■□□□□ 0.95
TRIM29-210ENST00000528870 MBD5Q9P267 1494 aa20.99■□□□□ 0.95
TRIM29-210ENST00000528870 PLEKHD1A6NEE1 506 aa20.98■□□□□ 0.95
TRIM29-210ENST00000528870 ANKRD50Q9ULJ7 1429 aa20.98■□□□□ 0.95
TRIM29-210ENST00000528870 IRX6P78412 446 aaPredicted RBP20.96■□□□□ 0.95
TRIM29-210ENST00000528870 ZNF326Q5BKZ1 582 aaKnown RBP20.95■□□□□ 0.94
TRIM29-210ENST00000528870 RBM19Q9Y4C8 960 aaKnown RBP20.94■□□□□ 0.94
TRIM29-210ENST00000528870 CDC42BPAQ5VT25 1732 aa20.94■□□□□ 0.94
TRIM29-210ENST00000528870 ABCA8O94911 1581 aa20.94■□□□□ 0.94
TRIM29-210ENST00000528870 SHANK2Q9UPX8 1470 aa20.93■□□□□ 0.94
TRIM29-210ENST00000528870 USP47Q96K76 1375 aa20.93■□□□□ 0.94
TRIM29-210ENST00000528870 C9orf84Q5VXU9 1444 aa20.92■□□□□ 0.94
TRIM29-210ENST00000528870 ABCC10Q5T3U5 1492 aa20.92■□□□□ 0.94
TRIM29-210ENST00000528870 ZBED9Q6R2W3 1325 aa20.92■□□□□ 0.94
TRIM29-210ENST00000528870 ATP10BO94823 1461 aa20.91■□□□□ 0.94
TRIM29-210ENST00000528870 ANP32EQ9BTT0 268 aa20.9■□□□□ 0.94
TRIM29-210ENST00000528870 NUP155O75694 1391 aa20.9■□□□□ 0.94
TRIM29-210ENST00000528870 ERICH6BQ5W0A0 696 aa20.9■□□□□ 0.94
TRIM29-210ENST00000528870 TSPY4P0CV99 314 aa20.89■□□□□ 0.93
TRIM29-210ENST00000528870 TSPY10P0CW01 314 aa20.89■□□□□ 0.93
TRIM29-210ENST00000528870 POLR3GLQ9BT43 218 aa20.88■□□□□ 0.93
TRIM29-210ENST00000528870 KDM5CP41229 1560 aa20.87■□□□□ 0.93
TRIM29-210ENST00000528870 BCORL1Q5H9F3 1711 aa20.86■□□□□ 0.93
TRIM29-210ENST00000528870 DHX29Q7Z478 1369 aaKnown RBP20.86■□□□□ 0.93
TRIM29-210ENST00000528870 ARID4BQ4LE39 1312 aaPredicted RBP20.85■□□□□ 0.93
TRIM29-210ENST00000528870 UHRF1BP1Q6BDS2 1440 aa20.85■□□□□ 0.93
TRIM29-210ENST00000528870 KDM5DQ9BY66 1539 aa20.84■□□□□ 0.93
TRIM29-210ENST00000528870 RALGAPBQ86X10 1494 aa20.83■□□□□ 0.92
TRIM29-210ENST00000528870 ARHGEF12Q9NZN5 1544 aa20.83■□□□□ 0.92
TRIM29-210ENST00000528870 PPP4R2Q9NY27 417 aa20.82■□□□□ 0.92
TRIM29-210ENST00000528870 KIF15Q9NS87 1388 aa20.82■□□□□ 0.92
TRIM29-210ENST00000528870 HNRNPMP52272 730 aaKnown RBP eCLIP20.81■□□□□ 0.92
TRIM29-210ENST00000528870 CNGB1Q14028 1251 aaPredicted RBP20.81■□□□□ 0.92
TRIM29-210ENST00000528870 ARHGEF5Q12774 1597 aa20.81■□□□□ 0.92
TRIM29-210ENST00000528870 CARD11Q9BXL7 1154 aa20.8■□□□□ 0.92
TRIM29-210ENST00000528870 ROCK2O75116 1388 aaKnown RBP20.79■□□□□ 0.92
TRIM29-210ENST00000528870 PTPRGP23470 1445 aa20.78■□□□□ 0.92
TRIM29-210ENST00000528870 KDM2AQ9Y2K7 1162 aa20.76■□□□□ 0.91
TRIM29-210ENST00000528870 CCDC141Q6ZP82 1450 aa20.75■□□□□ 0.91
TRIM29-210ENST00000528870 DCAF11Q8TEB1 546 aa20.74■□□□□ 0.91
TRIM29-210ENST00000528870 SAMD9LQ8IVG5 1584 aa20.73■□□□□ 0.91
TRIM29-210ENST00000528870 PREX2Q70Z35 1606 aa20.72■□□□□ 0.91
TRIM29-210ENST00000528870 SMG6Q86US8 1419 aaKnown RBP20.72■□□□□ 0.91
TRIM29-210ENST00000528870 RSPH4AQ5TD94 716 aa20.71■□□□□ 0.91
TRIM29-210ENST00000528870 CDC42BPBQ9Y5S2 1711 aa20.71■□□□□ 0.91
TRIM29-210ENST00000528870 FAM135AQ9P2D6 1515 aa20.71■□□□□ 0.91
TRIM29-210ENST00000528870 ST20-MTHFSA0A0A6YYL1 179 aa20.7■□□□□ 0.9
TRIM29-210ENST00000528870 TMC1Q8TDI8 760 aa20.68■□□□□ 0.9
TRIM29-210ENST00000528870 B4GALNT3Q6L9W6 998 aa20.68■□□□□ 0.9
TRIM29-210ENST00000528870 CHD1O14646 1710 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms