RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	MAGI1	Q96QZ7	1491 aa	Predicted RBP	32.73	■■■□□ 2.83
GSDMD-208	ENST00000528475	WASHC2A	Q641Q2	1341 aa		32.7	■■■□□ 2.83
GSDMD-208	ENST00000528475	EIF4G2	P78344	907 aa	Known RBP eCLIP	32.7	■■■□□ 2.82
GSDMD-208	ENST00000528475	RPRD2	Q5VT52	1461 aa	Known RBP	32.69	■■■□□ 2.82
GSDMD-208	ENST00000528475	ANKRD30B	Q9BXX2	1392 aa		32.69	■■■□□ 2.82
GSDMD-208	ENST00000528475	NEFL	P07196	543 aa		32.67	■■■□□ 2.82
GSDMD-208	ENST00000528475	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.66	■■■□□ 2.82
GSDMD-208	ENST00000528475	L3MBTL2	Q969R5	705 aa		32.65	■■■□□ 2.82
GSDMD-208	ENST00000528475	ARID3C	A6NKF2	412 aa		32.63	■■■□□ 2.81
GSDMD-208	ENST00000528475	SYNJ2	O15056	1496 aa		32.62	■■■□□ 2.81
GSDMD-208	ENST00000528475	TEX14	Q8IWB6	1497 aa		32.62	■■■□□ 2.81
GSDMD-208	ENST00000528475	CNTLN	Q9NXG0	1405 aa		32.61	■■■□□ 2.81
GSDMD-208	ENST00000528475	TRO	Q12816	1431 aa	Predicted RBP	32.61	■■■□□ 2.81
GSDMD-208	ENST00000528475	CHMP7	Q8WUX9	453 aa	Predicted RBP	32.6	■■■□□ 2.81
GSDMD-208	ENST00000528475	ITSN2	Q9NZM3	1697 aa		32.6	■■■□□ 2.81
GSDMD-208	ENST00000528475	NCOA1	Q15788	1441 aa		32.59	■■■□□ 2.81
GSDMD-208	ENST00000528475	ADCY10	Q96PN6	1610 aa		32.58	■■■□□ 2.81
GSDMD-208	ENST00000528475	BCAN	Q96GW7	911 aa		32.57	■■■□□ 2.8
GSDMD-208	ENST00000528475	ADGB	Q8N7X0	1667 aa		32.54	■■■□□ 2.8
GSDMD-208	ENST00000528475	ZNF644	Q9H582	1327 aa	Predicted RBP	32.54	■■■□□ 2.8
GSDMD-208	ENST00000528475	CAMSAP2	Q08AD1	1489 aa		32.53	■■■□□ 2.8
GSDMD-208	ENST00000528475	FOXD1	Q16676	465 aa		32.53	■■■□□ 2.8
GSDMD-208	ENST00000528475	CCDC7	Q96M83	1385 aa		32.52	■■■□□ 2.8
GSDMD-208	ENST00000528475	CEP170	Q5SW79	1584 aa		32.51	■■■□□ 2.79
GSDMD-208	ENST00000528475	ADGRL2	O95490	1459 aa		32.51	■■■□□ 2.79
GSDMD-208	ENST00000528475	PRG4	Q92954	1404 aa	Predicted RBP	32.5	■■■□□ 2.79
GSDMD-208	ENST00000528475	POLR1A	O95602	1720 aa	Predicted RBP	32.5	■■■□□ 2.79
GSDMD-208	ENST00000528475	FBLN2	P98095	1184 aa		32.49	■■■□□ 2.79
GSDMD-208	ENST00000528475	PZP	P20742	1482 aa		32.49	■■■□□ 2.79
GSDMD-208	ENST00000528475	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.48	■■■□□ 2.79
GSDMD-208	ENST00000528475	SPATA31E1	Q6ZUB1	1445 aa		32.48	■■■□□ 2.79
GSDMD-208	ENST00000528475	CROCC2	H7BZ55	1655 aa		32.47	■■■□□ 2.79
GSDMD-208	ENST00000528475	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.47	■■■□□ 2.79
GSDMD-208	ENST00000528475	NBPF8	Q3BBV2	869 aa		32.46	■■■□□ 2.79
GSDMD-208	ENST00000528475	HNRNPU	Q00839	825 aa	Known RBP eCLIP	32.44	■■■□□ 2.78
GSDMD-208	ENST00000528475	PLB1	Q6P1J6	1458 aa		32.43	■■■□□ 2.78
GSDMD-208	ENST00000528475	NUP160	Q12769	1436 aa		32.42	■■■□□ 2.78
GSDMD-208	ENST00000528475	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.42	■■■□□ 2.78
GSDMD-208	ENST00000528475	C11orf95	C9JLR9	678 aa	Predicted RBP	32.41	■■■□□ 2.78
GSDMD-208	ENST00000528475	KIF14	Q15058	1648 aa		32.41	■■■□□ 2.78
GSDMD-208	ENST00000528475	CARMIL2	Q6F5E8	1435 aa		32.4	■■■□□ 2.78
GSDMD-208	ENST00000528475	MBD5	Q9P267	1494 aa		32.38	■■■□□ 2.77
GSDMD-208	ENST00000528475	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.37	■■■□□ 2.77
GSDMD-208	ENST00000528475	KIAA1107	Q9UPP5	1409 aa		32.36	■■■□□ 2.77
GSDMD-208	ENST00000528475	ANKRD30A	Q9BXX3	1397 aa		32.32	■■■□□ 2.76
GSDMD-208	ENST00000528475	KIF7	Q2M1P5	1343 aa		32.3	■■■□□ 2.76
GSDMD-208	ENST00000528475	ABCA8	O94911	1581 aa		32.29	■■■□□ 2.76
GSDMD-208	ENST00000528475	SHANK2	Q9UPX8	1470 aa		32.29	■■■□□ 2.76
GSDMD-208	ENST00000528475	JPH4	Q96JJ6	628 aa		32.28	■■■□□ 2.76
GSDMD-208	ENST00000528475	CCDC184	Q52MB2	194 aa		32.25	■■■□□ 2.75
GSDMD-208	ENST00000528475	ERICH6B	Q5W0A0	696 aa		32.25	■■■□□ 2.75
GSDMD-208	ENST00000528475	ABCC10	Q5T3U5	1492 aa		32.25	■■■□□ 2.75
GSDMD-208	ENST00000528475	CDC42BPA	Q5VT25	1732 aa		32.25	■■■□□ 2.75
GSDMD-208	ENST00000528475	ANKRD50	Q9ULJ7	1429 aa		32.23	■■■□□ 2.75
GSDMD-208	ENST00000528475	KDM5D	Q9BY66	1539 aa		32.2	■■■□□ 2.74
GSDMD-208	ENST00000528475	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.19	■■■□□ 2.74
GSDMD-208	ENST00000528475	UHRF1BP1	Q6BDS2	1440 aa		32.17	■■■□□ 2.74
GSDMD-208	ENST00000528475	MRS2	Q9HD23	443 aa		32.17	■■■□□ 2.74
GSDMD-208	ENST00000528475	ATP10B	O94823	1461 aa		32.17	■■■□□ 2.74
GSDMD-208	ENST00000528475	ZBED9	Q6R2W3	1325 aa		32.17	■■■□□ 2.74
GSDMD-208	ENST00000528475	PKD2	Q13563	968 aa		32.17	■■■□□ 2.74
GSDMD-208	ENST00000528475	ARID4B	Q4LE39	1312 aa	Predicted RBP	32.17	■■■□□ 2.74
GSDMD-208	ENST00000528475	PLEKHD1	A6NEE1	506 aa		32.16	■■■□□ 2.74
GSDMD-208	ENST00000528475	RBM19	Q9Y4C8	960 aa	Known RBP	32.15	■■■□□ 2.74
GSDMD-208	ENST00000528475	KDM5C	P41229	1560 aa		32.15	■■■□□ 2.74
GSDMD-208	ENST00000528475	C9orf84	Q5VXU9	1444 aa		32.15	■■■□□ 2.74
GSDMD-208	ENST00000528475	ANP32E	Q9BTT0	268 aa		32.13	■■■□□ 2.73
GSDMD-208	ENST00000528475	USP47	Q96K76	1375 aa		32.13	■■■□□ 2.73
GSDMD-208	ENST00000528475	ARHGEF12	Q9NZN5	1544 aa		32.12	■■■□□ 2.73
GSDMD-208	ENST00000528475	BCORL1	Q5H9F3	1711 aa		32.12	■■■□□ 2.73
GSDMD-208	ENST00000528475	DHX29	Q7Z478	1369 aa	Known RBP	32.11	■■■□□ 2.73
GSDMD-208	ENST00000528475	ARHGEF5	Q12774	1597 aa		32.11	■■■□□ 2.73
GSDMD-208	ENST00000528475	RALGAPB	Q86X10	1494 aa		32.1	■■■□□ 2.73
GSDMD-208	ENST00000528475	CHD1	O14646	1710 aa		32.1	■■■□□ 2.73
GSDMD-208	ENST00000528475	FAM9B	Q8IZU0	186 aa		32.08	■■■□□ 2.73
GSDMD-208	ENST00000528475	PTPRG	P23470	1445 aa		32.06	■■■□□ 2.72
GSDMD-208	ENST00000528475	NUP155	O75694	1391 aa		32.04	■■■□□ 2.72
GSDMD-208	ENST00000528475	ROCK2	O75116	1388 aa	Known RBP	32.02	■■■□□ 2.72
GSDMD-208	ENST00000528475	PPP4R2	Q9NY27	417 aa		32	■■■□□ 2.71
GSDMD-208	ENST00000528475	TSPY4	P0CV99	314 aa		31.99	■■■□□ 2.71
GSDMD-208	ENST00000528475	TSPY10	P0CW01	314 aa		31.99	■■■□□ 2.71
GSDMD-208	ENST00000528475	IRX6	P78412	446 aa	Predicted RBP	31.98	■■■□□ 2.71
GSDMD-208	ENST00000528475	KIF15	Q9NS87	1388 aa		31.96	■■■□□ 2.71
GSDMD-208	ENST00000528475	PREX2	Q70Z35	1606 aa		31.94	■■■□□ 2.7
GSDMD-208	ENST00000528475	ZNF326	Q5BKZ1	582 aa	Known RBP	31.93	■■■□□ 2.7
GSDMD-208	ENST00000528475	CCDC141	Q6ZP82	1450 aa		31.92	■■■□□ 2.7
GSDMD-208	ENST00000528475	SAMD9L	Q8IVG5	1584 aa		31.91	■■■□□ 2.7
GSDMD-208	ENST00000528475	SMG6	Q86US8	1419 aa	Known RBP	31.9	■■■□□ 2.7
GSDMD-208	ENST00000528475	CDC42BPB	Q9Y5S2	1711 aa		31.89	■■■□□ 2.7
GSDMD-208	ENST00000528475	RSPH4A	Q5TD94	716 aa		31.89	■■■□□ 2.7
GSDMD-208	ENST00000528475	SHROOM2	Q13796	1616 aa		31.88	■■■□□ 2.69
GSDMD-208	ENST00000528475	CARD11	Q9BXL7	1154 aa		31.86	■■■□□ 2.69
GSDMD-208	ENST00000528475	HNRNPM	P52272	730 aa	Known RBP eCLIP	31.85	■■■□□ 2.69
GSDMD-208	ENST00000528475	FAM135A	Q9P2D6	1515 aa		31.84	■■■□□ 2.69
GSDMD-208	ENST00000528475	MAST1	Q9Y2H9	1570 aa		31.84	■■■□□ 2.69
GSDMD-208	ENST00000528475	FANCI	Q9NVI1	1328 aa		31.82	■■■□□ 2.68
GSDMD-208	ENST00000528475	KTN1	Q86UP2	1357 aa	Known RBP	31.82	■■■□□ 2.68
GSDMD-208	ENST00000528475		E9PCH4	1651 aa		31.8	■■■□□ 2.68
GSDMD-208	ENST00000528475	UNC13B	O14795	1591 aa		31.79	■■■□□ 2.68
GSDMD-208	ENST00000528475	POLR3GL	Q9BT43	218 aa		31.77	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms