RNA–Protein interactions for RNA: ENST00000527045.1

FDFT1-211, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 1 (best)

Gene FDFT1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-211ENST00000527045 YEATS2Q9ULM3 1422 aa15.29■□□□□ 0.04
FDFT1-211ENST00000527045 GOLGA3Q08378 1498 aa15.28■□□□□ 0.04
FDFT1-211ENST00000527045 NCBP3Q53F19 620 aaKnown RBP15.28■□□□□ 0.04
FDFT1-211ENST00000527045 TTC37Q6PGP7 1564 aa15.28■□□□□ 0.04
FDFT1-211ENST00000527045 ATP10BO94823 1461 aa15.27■□□□□ 0.04
FDFT1-211ENST00000527045 DENND4BO75064 1496 aaPredicted RBP15.24■□□□□ 0.03
FDFT1-211ENST00000527045 AKNAQ7Z591 1439 aa15.24■□□□□ 0.03
FDFT1-211ENST00000527045 CEBPAP49715 358 aaPredicted RBP15.22■□□□□ 0.03
FDFT1-211ENST00000527045 ZFYVE16Q7Z3T8 1539 aa15.22■□□□□ 0.03
FDFT1-211ENST00000527045 LTBP4Q8N2S1 1624 aa15.21■□□□□ 0.02
FDFT1-211ENST00000527045 FHOD3Q2V2M9 1422 aa15.19■□□□□ 0.02
FDFT1-211ENST00000527045 EFCAB5A4FU69 1503 aa15.19■□□□□ 0.02
FDFT1-211ENST00000527045 ZMYM4Q5VZL5 1548 aa15.18■□□□□ 0.02
FDFT1-211ENST00000527045 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.18■□□□□ 0.02
FDFT1-211ENST00000527045 HNRNPUL2Q1KMD3 747 aaKnown RBP15.18■□□□□ 0.02
FDFT1-211ENST00000527045 IQSEC2Q5JU85 1478 aa15.17■□□□□ 0.02
FDFT1-211ENST00000527045 P3H3Q8IVL6 736 aa15.17■□□□□ 0.02
FDFT1-211ENST00000527045 PTPRTO14522 1441 aa15.17■□□□□ 0.02
FDFT1-211ENST00000527045 SETD1BQ9UPS6 1966 aaKnown RBP15.16■□□□□ 0.02
FDFT1-211ENST00000527045 ARHGEF12Q9NZN5 1544 aa15.16■□□□□ 0.02
FDFT1-211ENST00000527045 UHRF1BP1Q6BDS2 1440 aa15.16■□□□□ 0.02
FDFT1-211ENST00000527045 FAM9AQ8IZU1 332 aaPredicted RBP15.15■□□□□ 0.02
FDFT1-211ENST00000527045 CFAP74Q9C0B2 1584 aa15.15■□□□□ 0.02
FDFT1-211ENST00000527045 HECW1Q76N89 1606 aa15.14■□□□□ 0.01
FDFT1-211ENST00000527045 RAPGEF6Q8TEU7 1601 aa15.12■□□□□ 0.01
FDFT1-211ENST00000527045 UBAP1LF5GYI3 381 aa15.11■□□□□ 0.01
FDFT1-211ENST00000527045 MAGI2Q86UL8 1455 aa15.11■□□□□ 0.01
FDFT1-211ENST00000527045 MED1Q15648 1581 aaPredicted RBP15.11■□□□□ 0.01
FDFT1-211ENST00000527045 ATP10AO60312 1499 aa15.07■□□□□ 0
FDFT1-211ENST00000527045 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.07■□□□□ 09e-8■□□□□ 9.8
FDFT1-211ENST00000527045 C9orf84Q5VXU9 1444 aa15.06■□□□□ 0
FDFT1-211ENST00000527045 C3P01024 1663 aa15.06■□□□□ 0
FDFT1-211ENST00000527045 NUP153P49790 1475 aaKnown RBP15.04■□□□□ -0
FDFT1-211ENST00000527045 NPM3O75607 178 aaKnown RBP15.04■□□□□ -0
FDFT1-211ENST00000527045 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.04■□□□□ -04e-31■□□□□ 11.2
FDFT1-211ENST00000527045 NCOA1Q15788 1441 aa15.03■□□□□ -0
FDFT1-211ENST00000527045 SCAPERQ9BY12 1400 aa15.03■□□□□ -0
FDFT1-211ENST00000527045 ZNF335Q9H4Z2 1342 aaPredicted RBP15.02■□□□□ -0
FDFT1-211ENST00000527045 PLEKHD1A6NEE1 506 aa15.02■□□□□ -0
FDFT1-211ENST00000527045 SAMD9Q5K651 1589 aa15□□□□□ -0.01
FDFT1-211ENST00000527045 HSPA1LP34931 641 aa15□□□□□ -0.01
FDFT1-211ENST00000527045 CAMSAP1Q5T5Y3 1602 aa14.98□□□□□ -0.01
FDFT1-211ENST00000527045 PRXQ9BXM0 1461 aa14.96□□□□□ -0.01
FDFT1-211ENST00000527045 TRAPPC8Q9Y2L5 1435 aa14.96□□□□□ -0.01
FDFT1-211ENST00000527045 NCKAP5LQ9HCH0 1330 aa14.95□□□□□ -0.02
FDFT1-211ENST00000527045 PIP4K2BP78356 416 aa14.95□□□□□ -0.02
FDFT1-211ENST00000527045 ESF1Q9H501 851 aaKnown RBP14.93□□□□□ -0.02
FDFT1-211ENST00000527045 PLCH2O75038 1416 aa14.92□□□□□ -0.02
FDFT1-211ENST00000527045 MYT1LQ9UL68 1186 aa14.92□□□□□ -0.02
FDFT1-211ENST00000527045 DIP2CQ9Y2E4 1556 aa14.91□□□□□ -0.02
FDFT1-211ENST00000527045 SUPT6HQ7KZ85 1726 aaKnown RBP14.9□□□□□ -0.02
FDFT1-211ENST00000527045 MYO5CQ9NQX4 1742 aa14.9□□□□□ -0.02
FDFT1-211ENST00000527045 RANGAP1P46060 587 aaPredicted RBP14.9□□□□□ -0.02
FDFT1-211ENST00000527045 AFAP1Q8N556 730 aa14.89□□□□□ -0.03
FDFT1-211ENST00000527045 ZNF518AQ6AHZ1 1483 aa14.89□□□□□ -0.03
FDFT1-211ENST00000527045 ABCA6Q8N139 1617 aa14.88□□□□□ -0.03
FDFT1-211ENST00000527045 KDM5CP41229 1560 aa14.87□□□□□ -0.03
FDFT1-211ENST00000527045 REREQ9P2R6 1566 aa14.86□□□□□ -0.03
FDFT1-211ENST00000527045 EFCAB2Q5VUJ9 269 aa14.86□□□□□ -0.03
FDFT1-211ENST00000527045 CDK13Q14004 1512 aaKnown RBP14.86□□□□□ -0.03
FDFT1-211ENST00000527045 TOM1O60784 492 aa14.85□□□□□ -0.03
FDFT1-211ENST00000527045 AGLP35573 1532 aa14.84□□□□□ -0.03
FDFT1-211ENST00000527045 PKD2Q13563 968 aa14.83□□□□□ -0.04
FDFT1-211ENST00000527045 ZNF142P52746 1687 aaPredicted RBP14.82□□□□□ -0.04
FDFT1-211ENST00000527045 NPATQ14207 1427 aa14.82□□□□□ -0.04
FDFT1-211ENST00000527045 CNTLNQ9NXG0 1405 aa14.82□□□□□ -0.04
FDFT1-211ENST00000527045 MYO3AQ8NEV4 1616 aa14.81□□□□□ -0.04
FDFT1-211ENST00000527045 MROH2AA6NES4 1674 aa14.81□□□□□ -0.04
FDFT1-211ENST00000527045 PLA2R1Q13018 1463 aa14.81□□□□□ -0.04
FDFT1-211ENST00000527045 TCOF1Q13428 1488 aaKnown RBP14.81□□□□□ -0.04
FDFT1-211ENST00000527045 ARHGAP5Q13017 1502 aa14.8□□□□□ -0.04
FDFT1-211ENST00000527045 KIF14Q15058 1648 aa14.78□□□□□ -0.04
FDFT1-211ENST00000527045 CEP170BQ9Y4F5 1589 aaPredicted RBP14.78□□□□□ -0.04
FDFT1-211ENST00000527045 MLH3Q9UHC1 1453 aa14.78□□□□□ -0.04
FDFT1-211ENST00000527045 ZMYM3Q14202 1370 aa14.77□□□□□ -0.04
FDFT1-211ENST00000527045 RGS17Q9UGC6 210 aaPredicted RBP14.77□□□□□ -0.05
FDFT1-211ENST00000527045 ALKQ9UM73 1620 aa14.76□□□□□ -0.05
FDFT1-211ENST00000527045 CPS1P31327 1500 aa14.76□□□□□ -0.05
FDFT1-211ENST00000527045 CLTCQ00610 1675 aaKnown RBP14.75□□□□□ -0.05
FDFT1-211ENST00000527045 KIDINS220Q9ULH0 1771 aa14.75□□□□□ -0.05
FDFT1-211ENST00000527045 CDC42BPBQ9Y5S2 1711 aa14.74□□□□□ -0.05
FDFT1-211ENST00000527045 POLR1AO95602 1720 aaPredicted RBP14.72□□□□□ -0.05
FDFT1-211ENST00000527045 SHANK2Q9UPX8 1470 aa14.72□□□□□ -0.05
FDFT1-211ENST00000527045 ATP1B4Q9UN42 357 aaPredicted RBP14.72□□□□□ -0.05
FDFT1-211ENST00000527045 PTPRKQ15262 1439 aa14.72□□□□□ -0.05
FDFT1-211ENST00000527045 ITSN2Q9NZM3 1697 aa14.71□□□□□ -0.05
FDFT1-211ENST00000527045 U3KPZ7 1027 aaPredicted RBP14.71□□□□□ -0.05
FDFT1-211ENST00000527045 DNMT1P26358 1616 aaKnown RBP14.69□□□□□ -0.06
FDFT1-211ENST00000527045 NEURL4Q96JN8 1562 aa14.68□□□□□ -0.06
FDFT1-211ENST00000527045 ABCC1P33527 1531 aa14.68□□□□□ -0.06
FDFT1-211ENST00000527045 SETD1AO15047 1707 aaKnown RBP14.67□□□□□ -0.06
FDFT1-211ENST00000527045 CSRNP3Q8WYN3 585 aa14.67□□□□□ -0.06
FDFT1-211ENST00000527045 VWDEQ8N2E2 1590 aa14.66□□□□□ -0.06
FDFT1-211ENST00000527045 POTEAQ6S8J7 498 aa14.66□□□□□ -0.06
FDFT1-211ENST00000527045 A2ML1A8K2U0 1454 aa14.65□□□□□ -0.06
FDFT1-211ENST00000527045 CDK11AQ9UQ88 783 aaPredicted RBP14.65□□□□□ -0.06
FDFT1-211ENST00000527045 PREX2Q70Z35 1606 aa14.64□□□□□ -0.07
FDFT1-211ENST00000527045 TROQ12816 1431 aaPredicted RBP14.64□□□□□ -0.07
FDFT1-211ENST00000527045 CLIP1P30622 1438 aa14.62□□□□□ -0.07
FDFT1-211ENST00000527045 STRCP1A6NGW2 1772 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms