RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 HFM1A2PYH4 1435 aa16.84■□□□□ 0.29
CHMP1B-201ENST00000526991 KDM6BO15054 1643 aa16.83■□□□□ 0.29
CHMP1B-201ENST00000526991 RAPGEF6Q8TEU7 1601 aa16.82■□□□□ 0.28
CHMP1B-201ENST00000526991 CNGB1Q14028 1251 aaPredicted RBP16.82■□□□□ 0.28
CHMP1B-201ENST00000526991 TIMELESSQ9UNS1 1208 aa16.81■□□□□ 0.28
CHMP1B-201ENST00000526991 HNRNPMP52272 730 aaKnown RBP eCLIP16.81■□□□□ 0.28
CHMP1B-201ENST00000526991 ZNF326Q5BKZ1 582 aaKnown RBP16.8■□□□□ 0.28
CHMP1B-201ENST00000526991 MPHOSPH9Q99550 1183 aa16.8■□□□□ 0.28
CHMP1B-201ENST00000526991 UACAQ9BZF9 1416 aa16.8■□□□□ 0.28
CHMP1B-201ENST00000526991 NUP160Q12769 1436 aa16.79■□□□□ 0.28
CHMP1B-201ENST00000526991 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.79■□□□□ 0.28
CHMP1B-201ENST00000526991 SLC4A1APQ9BWU0 796 aaKnown RBP16.79■□□□□ 0.28
CHMP1B-201ENST00000526991 PTPRGP23470 1445 aa16.78■□□□□ 0.28
CHMP1B-201ENST00000526991 KIF14Q15058 1648 aa16.77■□□□□ 0.28
CHMP1B-201ENST00000526991 ARHGEF11O15085 1522 aa16.76■□□□□ 0.27
CHMP1B-201ENST00000526991 HSPA5P11021 654 aaKnown RBP16.75■□□□□ 0.27
CHMP1B-201ENST00000526991 ABCC5O15440 1437 aa16.75■□□□□ 0.27
CHMP1B-201ENST00000526991 TROQ12816 1431 aaPredicted RBP16.75■□□□□ 0.27
CHMP1B-201ENST00000526991 DAPK1P53355 1430 aa16.74■□□□□ 0.27
CHMP1B-201ENST00000526991 ERCC6L2Q5T890 1561 aa16.74■□□□□ 0.27
CHMP1B-201ENST00000526991 TSHZ2Q9NRE2 1034 aa16.73■□□□□ 0.27
CHMP1B-201ENST00000526991 ATP10BO94823 1461 aa16.72■□□□□ 0.27
CHMP1B-201ENST00000526991 L3MBTL2Q969R5 705 aa16.72■□□□□ 0.27
CHMP1B-201ENST00000526991 IRX6P78412 446 aaPredicted RBP16.71■□□□□ 0.27
CHMP1B-201ENST00000526991 CHD1O14646 1710 aa16.7■□□□□ 0.26
CHMP1B-201ENST00000526991 HNRNPUQ00839 825 aaKnown RBP eCLIP16.7■□□□□ 0.26
CHMP1B-201ENST00000526991 NEFLP07196 543 aa16.7■□□□□ 0.26
CHMP1B-201ENST00000526991 GPATCH8Q9UKJ3 1502 aaKnown RBP16.7■□□□□ 0.26
CHMP1B-201ENST00000526991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.69■□□□□ 0.26
CHMP1B-201ENST00000526991 POLR3GLQ9BT43 218 aa16.69■□□□□ 0.26
CHMP1B-201ENST00000526991 MIA2Q96PC5 1412 aa16.69■□□□□ 0.26
CHMP1B-201ENST00000526991 WASHC2AQ641Q2 1341 aa16.68■□□□□ 0.26
CHMP1B-201ENST00000526991 CAMSAP2Q08AD1 1489 aa16.68■□□□□ 0.26
CHMP1B-201ENST00000526991 TCOF1Q13428 1488 aaKnown RBP16.68■□□□□ 0.26
CHMP1B-201ENST00000526991 CCER2I3L3R5 266 aa16.67■□□□□ 0.26
CHMP1B-201ENST00000526991 DENND4BO75064 1496 aaPredicted RBP16.67■□□□□ 0.26
CHMP1B-201ENST00000526991 C11orf95C9JLR9 678 aaPredicted RBP16.66■□□□□ 0.26
CHMP1B-201ENST00000526991 TSPY4P0CV99 314 aa16.66■□□□□ 0.26
CHMP1B-201ENST00000526991 TSPY10P0CW01 314 aa16.66■□□□□ 0.26
CHMP1B-201ENST00000526991 CCDC184Q52MB2 194 aa16.66■□□□□ 0.26
CHMP1B-201ENST00000526991 SENP3-EIF4A1A0A087X0R7 540 aa16.65■□□□□ 0.26
CHMP1B-201ENST00000526991 EIF4G2P78344 907 aaKnown RBP eCLIP16.65■□□□□ 0.26
CHMP1B-201ENST00000526991 PKD2Q13563 968 aa16.65■□□□□ 0.26
CHMP1B-201ENST00000526991 KDM2AQ9Y2K7 1162 aa16.64■□□□□ 0.25
CHMP1B-201ENST00000526991 NBPF8Q3BBV2 869 aa16.63■□□□□ 0.25
CHMP1B-201ENST00000526991 ANP32EQ9BTT0 268 aa16.62■□□□□ 0.25
CHMP1B-201ENST00000526991 ANO8Q9HCE9 1232 aaPredicted RBP16.62■□□□□ 0.25
CHMP1B-201ENST00000526991 FAM9BQ8IZU0 186 aa16.61■□□□□ 0.25
CHMP1B-201ENST00000526991 MYT1LQ9UL68 1186 aa16.61■□□□□ 0.25
CHMP1B-201ENST00000526991 KDM5BQ9UGL1 1544 aa16.59■□□□□ 0.25
CHMP1B-201ENST00000526991 NCOA1Q15788 1441 aa16.59■□□□□ 0.25
CHMP1B-201ENST00000526991 ABCA8O94911 1581 aa16.58■□□□□ 0.25
CHMP1B-201ENST00000526991 NUP155O75694 1391 aa16.58■□□□□ 0.25
CHMP1B-201ENST00000526991 AKNAQ7Z591 1439 aa16.58■□□□□ 0.24
CHMP1B-201ENST00000526991 DNMT1P26358 1616 aaKnown RBP16.57■□□□□ 0.24
CHMP1B-201ENST00000526991 PLEKHG5O94827 1062 aa16.56■□□□□ 0.24
CHMP1B-201ENST00000526991 RGL3Q3MIN7 710 aa16.56■□□□□ 0.24
CHMP1B-201ENST00000526991 ANKRD30AQ9BXX3 1397 aa16.55■□□□□ 0.24
CHMP1B-201ENST00000526991 ANKRD50Q9ULJ7 1429 aa16.54■□□□□ 0.24
CHMP1B-201ENST00000526991 GCC2Q8IWJ2 1684 aa16.54■□□□□ 0.24
CHMP1B-201ENST00000526991 C9orf84Q5VXU9 1444 aa16.53■□□□□ 0.24
CHMP1B-201ENST00000526991 ANKRD30BQ9BXX2 1392 aa16.52■□□□□ 0.24
CHMP1B-201ENST00000526991 MRS2Q9HD23 443 aa16.52■□□□□ 0.24
CHMP1B-201ENST00000526991 KIF15Q9NS87 1388 aa16.52■□□□□ 0.23
CHMP1B-201ENST00000526991 CDC42BPAQ5VT25 1732 aa16.51■□□□□ 0.23
CHMP1B-201ENST00000526991 ABCC10Q5T3U5 1492 aa16.51■□□□□ 0.23
CHMP1B-201ENST00000526991 ROCK1Q13464 1354 aa16.51■□□□□ 0.23
CHMP1B-201ENST00000526991 EIF5BO60841 1220 aaKnown RBP16.51■□□□□ 0.23
CHMP1B-201ENST00000526991 AFAP1Q8N556 730 aa16.5■□□□□ 0.23
CHMP1B-201ENST00000526991 ARHGAP5Q13017 1502 aa16.49■□□□□ 0.23
CHMP1B-201ENST00000526991 PZPP20742 1482 aa16.48■□□□□ 0.23
CHMP1B-201ENST00000526991 PRKRIP1Q9H875 184 aaPredicted RBP16.47■□□□□ 0.23
CHMP1B-201ENST00000526991 CCDC7Q96M83 1385 aa16.47■□□□□ 0.23
CHMP1B-201ENST00000526991 ITSN2Q9NZM3 1697 aa16.47■□□□□ 0.23
CHMP1B-201ENST00000526991 KIF7Q2M1P5 1343 aa16.47■□□□□ 0.23
CHMP1B-201ENST00000526991 DCAF11Q8TEB1 546 aa16.46■□□□□ 0.23
CHMP1B-201ENST00000526991 TTC37Q6PGP7 1564 aa16.45■□□□□ 0.22
CHMP1B-201ENST00000526991 SYCP2Q9BX26 1530 aa16.45■□□□□ 0.22
CHMP1B-201ENST00000526991 RBM19Q9Y4C8 960 aaKnown RBP16.43■□□□□ 0.22
CHMP1B-201ENST00000526991 CNTLNQ9NXG0 1405 aa16.43■□□□□ 0.22
CHMP1B-201ENST00000526991 SENP3Q9H4L4 574 aaPredicted RBP16.42■□□□□ 0.22
CHMP1B-201ENST00000526991 SAMD9LQ8IVG5 1584 aa16.41■□□□□ 0.22
CHMP1B-201ENST00000526991 RPRD2Q5VT52 1461 aaKnown RBP16.41■□□□□ 0.22
CHMP1B-201ENST00000526991 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.41■□□□□ 0.22
CHMP1B-201ENST00000526991 MBD5Q9P267 1494 aa16.4■□□□□ 0.22
CHMP1B-201ENST00000526991 ADCY10Q96PN6 1610 aa16.4■□□□□ 0.22
CHMP1B-201ENST00000526991 CCDC136Q96JN2 1154 aa16.4■□□□□ 0.22
CHMP1B-201ENST00000526991 CDC42BPBQ9Y5S2 1711 aa16.4■□□□□ 0.22
CHMP1B-201ENST00000526991 ABCC2Q92887 1545 aa16.39■□□□□ 0.21
CHMP1B-201ENST00000526991 KIAA1107Q9UPP5 1409 aa16.39■□□□□ 0.21
CHMP1B-201ENST00000526991 EFCAB2Q5VUJ9 269 aa16.38■□□□□ 0.21
CHMP1B-201ENST00000526991 TEX14Q8IWB6 1497 aa16.37■□□□□ 0.21
CHMP1B-201ENST00000526991 CCDC141Q6ZP82 1450 aa16.37■□□□□ 0.21
CHMP1B-201ENST00000526991 PLEKHH2Q8IVE3 1493 aa16.37■□□□□ 0.21
CHMP1B-201ENST00000526991 CARD11Q9BXL7 1154 aa16.36■□□□□ 0.21
CHMP1B-201ENST00000526991 ARHGEF12Q9NZN5 1544 aa16.36■□□□□ 0.21
CHMP1B-201ENST00000526991 OSCARQ8IYS5 282 aa16.36■□□□□ 0.21
CHMP1B-201ENST00000526991 B4GALNT3Q6L9W6 998 aa16.35■□□□□ 0.21
CHMP1B-201ENST00000526991 TRAPPC8Q9Y2L5 1435 aa16.35■□□□□ 0.21
CHMP1B-201ENST00000526991 SHROOM2Q13796 1616 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms