RNA–Protein interactions for RNA: ENST00000525148.1

NPAS4-203, Transcript of neuronal PAS domain protein 4, humanhuman

TSL 1 (best)

Gene NPAS4, Length 2,454 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-203ENST00000525148 DNMT1P26358 1616 aaKnown RBP24.64■■□□□ 1.54
NPAS4-203ENST00000525148 ATP10BO94823 1461 aa24.64■■□□□ 1.53
NPAS4-203ENST00000525148 TONSLQ96HA7 1378 aa24.63■■□□□ 1.53
NPAS4-203ENST00000525148 HIRIP3Q9BW71 556 aaPredicted RBP24.63■■□□□ 1.53
NPAS4-203ENST00000525148 CFDP1Q9UEE9 299 aaPredicted RBP24.62■■□□□ 1.53
NPAS4-203ENST00000525148 CHD1O14646 1710 aa24.62■■□□□ 1.53
NPAS4-203ENST00000525148 ZNF777Q9ULD5 760 aaPredicted RBP24.6■■□□□ 1.53
NPAS4-203ENST00000525148 CAMSAP2Q08AD1 1489 aa24.6■■□□□ 1.53
NPAS4-203ENST00000525148 ADCY10Q96PN6 1610 aa24.6■■□□□ 1.53
NPAS4-203ENST00000525148 ROCK1Q13464 1354 aa24.59■■□□□ 1.53
NPAS4-203ENST00000525148 FOXD1Q16676 465 aa24.59■■□□□ 1.53
NPAS4-203ENST00000525148 MPHOSPH9Q99550 1183 aa24.58■■□□□ 1.53
NPAS4-203ENST00000525148 KDM5BQ9UGL1 1544 aa24.57■■□□□ 1.52
NPAS4-203ENST00000525148 PTPRGP23470 1445 aa24.57■■□□□ 1.52
NPAS4-203ENST00000525148 PLEKHD1A6NEE1 506 aa24.56■■□□□ 1.52
NPAS4-203ENST00000525148 ITSN2Q9NZM3 1697 aa24.53■■□□□ 1.52
NPAS4-203ENST00000525148 GTF3C3Q9Y5Q9 886 aa24.53■■□□□ 1.52
NPAS4-203ENST00000525148 ABCC10Q5T3U5 1492 aa24.52■■□□□ 1.52
NPAS4-203ENST00000525148 ERCC6L2Q5T890 1561 aa24.5■■□□□ 1.51
NPAS4-203ENST00000525148 DDX10Q13206 875 aaKnown RBP24.5■■□□□ 1.51
NPAS4-203ENST00000525148 NCOA1Q15788 1441 aa24.47■■□□□ 1.51
NPAS4-203ENST00000525148 CDC42BPAQ5VT25 1732 aa24.46■■□□□ 1.51
NPAS4-203ENST00000525148 SHROOM2Q13796 1616 aa24.45■■□□□ 1.5
NPAS4-203ENST00000525148 KCNH8Q96L42 1107 aa24.41■■□□□ 1.5
NPAS4-203ENST00000525148 CROCC2H7BZ55 1655 aa24.41■■□□□ 1.5
NPAS4-203ENST00000525148 ANKRD30BQ9BXX2 1392 aa24.41■■□□□ 1.5
NPAS4-203ENST00000525148 ADGRL2O95490 1459 aa24.4■■□□□ 1.5
NPAS4-203ENST00000525148 SLC4A1APQ9BWU0 796 aaKnown RBP24.4■■□□□ 1.5
NPAS4-203ENST00000525148 PZPP20742 1482 aa24.38■■□□□ 1.49
NPAS4-203ENST00000525148 ADGBQ8N7X0 1667 aa24.38■■□□□ 1.49
NPAS4-203ENST00000525148 L3MBTL2Q969R5 705 aa24.38■■□□□ 1.49
NPAS4-203ENST00000525148 HNRNPMP52272 730 aaKnown RBP eCLIP24.36■■□□□ 1.49
NPAS4-203ENST00000525148 ANKRD30AQ9BXX3 1397 aa24.34■■□□□ 1.49
NPAS4-203ENST00000525148 C9orf84Q5VXU9 1444 aa24.32■■□□□ 1.48
NPAS4-203ENST00000525148 RPRD2Q5VT52 1461 aaKnown RBP24.31■■□□□ 1.48
NPAS4-203ENST00000525148 ANKRD50Q9ULJ7 1429 aa24.3■■□□□ 1.48
NPAS4-203ENST00000525148 MBD5Q9P267 1494 aa24.29■■□□□ 1.48
NPAS4-203ENST00000525148 CLASP1Q7Z460 1538 aa24.28■■□□□ 1.48
NPAS4-203ENST00000525148 SAMD9LQ8IVG5 1584 aa24.28■■□□□ 1.48
NPAS4-203ENST00000525148 ABCC2Q92887 1545 aa24.27■■□□□ 1.48
NPAS4-203ENST00000525148 CDC42BPBQ9Y5S2 1711 aa24.27■■□□□ 1.48
NPAS4-203ENST00000525148 SHANK2Q9UPX8 1470 aa24.27■■□□□ 1.48
NPAS4-203ENST00000525148 TEX14Q8IWB6 1497 aa24.26■■□□□ 1.47
NPAS4-203ENST00000525148 HSPA5P11021 654 aaKnown RBP24.26■■□□□ 1.47
NPAS4-203ENST00000525148 NBPF8Q3BBV2 869 aa24.26■■□□□ 1.47
NPAS4-203ENST00000525148 TTC37Q6PGP7 1564 aa24.26■■□□□ 1.47
NPAS4-203ENST00000525148 PREX2Q70Z35 1606 aa24.24■■□□□ 1.47
NPAS4-203ENST00000525148 TSPY4P0CV99 314 aa24.24■■□□□ 1.47
NPAS4-203ENST00000525148 TSPY10P0CW01 314 aa24.24■■□□□ 1.47
NPAS4-203ENST00000525148 PKD2Q13563 968 aa24.24■■□□□ 1.47
NPAS4-203ENST00000525148 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.24■■□□□ 1.47
NPAS4-203ENST00000525148 ARHGEF5Q12774 1597 aa24.21■■□□□ 1.47
NPAS4-203ENST00000525148 KIAA1107Q9UPP5 1409 aa24.21■■□□□ 1.47
NPAS4-203ENST00000525148 KIF15Q9NS87 1388 aa24.2■■□□□ 1.46
NPAS4-203ENST00000525148 NUP155O75694 1391 aa24.19■■□□□ 1.46
NPAS4-203ENST00000525148 CCDC141Q6ZP82 1450 aa24.18■■□□□ 1.46
NPAS4-203ENST00000525148 ARHGAP5Q13017 1502 aa24.17■■□□□ 1.46
NPAS4-203ENST00000525148 SYCP2Q9BX26 1530 aa24.17■■□□□ 1.46
NPAS4-203ENST00000525148 WASHC2AQ641Q2 1341 aa24.17■■□□□ 1.46
NPAS4-203ENST00000525148 EIF4G2P78344 907 aaKnown RBP eCLIP24.15■■□□□ 1.46
NPAS4-203ENST00000525148 ZCCHC11Q5TAX3 1644 aaKnown RBP24.13■■□□□ 1.45
NPAS4-203ENST00000525148 C11orf95C9JLR9 678 aaPredicted RBP24.13■■□□□ 1.45
NPAS4-203ENST00000525148 ANP32CO43423 234 aa24.11■■□□□ 1.45
NPAS4-203ENST00000525148 UHRF1BP1LA0JNW5 1464 aa24.09■■□□□ 1.45
NPAS4-203ENST00000525148 ARHGEF12Q9NZN5 1544 aa24.09■■□□□ 1.45
NPAS4-203ENST00000525148 KDM5DQ9BY66 1539 aa24.08■■□□□ 1.45
NPAS4-203ENST00000525148 MYO5CQ9NQX4 1742 aa24.06■■□□□ 1.44
NPAS4-203ENST00000525148 RSPH4AQ5TD94 716 aa24.06■■□□□ 1.44
NPAS4-203ENST00000525148 CCER2I3L3R5 266 aa24.04■■□□□ 1.44
NPAS4-203ENST00000525148 ZNF326Q5BKZ1 582 aaKnown RBP24.04■■□□□ 1.44
NPAS4-203ENST00000525148 PLCH2O75038 1416 aa24.03■■□□□ 1.44
NPAS4-203ENST00000525148 SPATA31E1Q6ZUB1 1445 aa24.03■■□□□ 1.44
NPAS4-203ENST00000525148 MAST1Q9Y2H9 1570 aa24.01■■□□□ 1.43
NPAS4-203ENST00000525148 FAM135AQ9P2D6 1515 aa23.99■■□□□ 1.43
NPAS4-203ENST00000525148 CCDC7Q96M83 1385 aa23.99■■□□□ 1.43
NPAS4-203ENST00000525148 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.97■■□□□ 1.43
NPAS4-203ENST00000525148 PLEKHH2Q8IVE3 1493 aa23.97■■□□□ 1.43
NPAS4-203ENST00000525148 EFCAB2Q5VUJ9 269 aa23.96■■□□□ 1.43
NPAS4-203ENST00000525148 TRAPPC8Q9Y2L5 1435 aa23.95■■□□□ 1.43
NPAS4-203ENST00000525148 KIF7Q2M1P5 1343 aa23.93■■□□□ 1.42
NPAS4-203ENST00000525148 CNTLNQ9NXG0 1405 aa23.93■■□□□ 1.42
NPAS4-203ENST00000525148 ABCC1P33527 1531 aa23.92■■□□□ 1.42
NPAS4-203ENST00000525148 PLXNC1O60486 1568 aa23.92■■□□□ 1.42
NPAS4-203ENST00000525148 KDM2AQ9Y2K7 1162 aa23.92■■□□□ 1.42
NPAS4-203ENST00000525148 UNC13BO14795 1591 aa23.91■■□□□ 1.42
NPAS4-203ENST00000525148 PLA2R1Q13018 1463 aa23.89■■□□□ 1.42
NPAS4-203ENST00000525148 UHRF1BP1Q6BDS2 1440 aa23.89■■□□□ 1.41
NPAS4-203ENST00000525148 USP47Q96K76 1375 aa23.89■■□□□ 1.41
NPAS4-203ENST00000525148 AFAP1Q8N556 730 aa23.88■■□□□ 1.41
NPAS4-203ENST00000525148 DCAF11Q8TEB1 546 aa23.87■■□□□ 1.41
NPAS4-203ENST00000525148 WDR7Q9Y4E6 1490 aa23.86■■□□□ 1.41
NPAS4-203ENST00000525148 DUOX2Q9NRD8 1548 aa23.86■■□□□ 1.41
NPAS4-203ENST00000525148 CCDC184Q52MB2 194 aa23.85■■□□□ 1.41
NPAS4-203ENST00000525148 BCORL1Q5H9F3 1711 aa23.85■■□□□ 1.41
NPAS4-203ENST00000525148 KDM5CP41229 1560 aa23.83■■□□□ 1.41
NPAS4-203ENST00000525148 RALGAPBQ86X10 1494 aa23.83■■□□□ 1.41
NPAS4-203ENST00000525148 SUPT16HQ9Y5B9 1047 aaKnown RBP23.82■■□□□ 1.4
NPAS4-203ENST00000525148 IQGAP3Q86VI3 1631 aa23.82■■□□□ 1.4
NPAS4-203ENST00000525148 CCDC144AA2RUR9 1427 aa23.81■■□□□ 1.4
NPAS4-203ENST00000525148 ERBINQ96RT1 1412 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms