RNA–Protein interactions for RNA: ENST00000524835.5

TM9SF1-203, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2 BASIC

Gene TM9SF1, Length 1,938 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-203ENST00000524835 CHIC2Q9UKJ5 165 aa28.39■■■□□ 2.13
TM9SF1-203ENST00000524835 ROCK1Q13464 1354 aa28.37■■■□□ 2.13
TM9SF1-203ENST00000524835 RRP7BPQ9NSQ0 103 aa28.36■■■□□ 2.13
TM9SF1-203ENST00000524835 KDM6BO15054 1643 aa28.32■■■□□ 2.12
TM9SF1-203ENST00000524835 KDM5BQ9UGL1 1544 aa28.31■■■□□ 2.12
TM9SF1-203ENST00000524835 ZCCHC11Q5TAX3 1644 aaKnown RBP28.31■■■□□ 2.12
TM9SF1-203ENST00000524835 CROCC2H7BZ55 1655 aa28.3■■■□□ 2.12
TM9SF1-203ENST00000524835 PREX2Q70Z35 1606 aa28.28■■■□□ 2.12
TM9SF1-203ENST00000524835 ZNF777Q9ULD5 760 aaPredicted RBP28.27■■■□□ 2.12
TM9SF1-203ENST00000524835 TTC37Q6PGP7 1564 aa28.26■■■□□ 2.11
TM9SF1-203ENST00000524835 ADGBQ8N7X0 1667 aa28.25■■■□□ 2.11
TM9SF1-203ENST00000524835 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.24■■■□□ 2.11
TM9SF1-203ENST00000524835 CDC42BPBQ9Y5S2 1711 aa28.24■■■□□ 2.11
TM9SF1-203ENST00000524835 ADGRL2O95490 1459 aa28.23■■■□□ 2.11
TM9SF1-203ENST00000524835 ZNF316A6NFI3 1004 aaPredicted RBP28.23■■■□□ 2.11
TM9SF1-203ENST00000524835 OSCARQ8IYS5 282 aa28.23■■■□□ 2.11
TM9SF1-203ENST00000524835 SHANK2Q9UPX8 1470 aa28.19■■■□□ 2.1
TM9SF1-203ENST00000524835 NCOA1Q15788 1441 aa28.19■■■□□ 2.1
TM9SF1-203ENST00000524835 SIN3AQ96ST3 1273 aa28.19■■■□□ 2.1
TM9SF1-203ENST00000524835 SAMD9LQ8IVG5 1584 aa28.19■■■□□ 2.1
TM9SF1-203ENST00000524835 ARHGEF5Q12774 1597 aa28.17■■■□□ 2.1
TM9SF1-203ENST00000524835 DENND4BO75064 1496 aaPredicted RBP28.16■■■□□ 2.1
TM9SF1-203ENST00000524835 MBD5Q9P267 1494 aa28.15■■■□□ 2.1
TM9SF1-203ENST00000524835 MYO5CQ9NQX4 1742 aa28.14■■■□□ 2.1
TM9SF1-203ENST00000524835 ACIN1Q9UKV3 1341 aaKnown RBP28.12■■■□□ 2.09
TM9SF1-203ENST00000524835 TIMELESSQ9UNS1 1208 aa28.11■■■□□ 2.09
TM9SF1-203ENST00000524835 ARHGAP5Q13017 1502 aa28.11■■■□□ 2.09
TM9SF1-203ENST00000524835 C9orf84Q5VXU9 1444 aa28.11■■■□□ 2.09
TM9SF1-203ENST00000524835 ANKRD30AQ9BXX3 1397 aa28.1■■■□□ 2.09
TM9SF1-203ENST00000524835 NEUROD1Q13562 356 aa28.1■■■□□ 2.09
TM9SF1-203ENST00000524835 TRIM52Q96A61 297 aa28.09■■■□□ 2.09
TM9SF1-203ENST00000524835 CCDC141Q6ZP82 1450 aa28.07■■■□□ 2.08
TM9SF1-203ENST00000524835 KCNH8Q96L42 1107 aa28.07■■■□□ 2.08
TM9SF1-203ENST00000524835 HNRNPMP52272 730 aaKnown RBP eCLIP28.06■■■□□ 2.08
TM9SF1-203ENST00000524835 DIEXFQ68CQ4 756 aaKnown RBP28.06■■■□□ 2.08
TM9SF1-203ENST00000524835 SYCP2Q9BX26 1530 aa28.04■■■□□ 2.08
TM9SF1-203ENST00000524835 PLCH2O75038 1416 aa28.04■■■□□ 2.08
TM9SF1-203ENST00000524835 MPHOSPH9Q99550 1183 aa28.04■■■□□ 2.08
TM9SF1-203ENST00000524835 WDR7Q9Y4E6 1490 aa28.04■■■□□ 2.08
TM9SF1-203ENST00000524835 PLEKHH2Q8IVE3 1493 aa28.01■■■□□ 2.07
TM9SF1-203ENST00000524835 KIAA1107Q9UPP5 1409 aa28.01■■■□□ 2.07
TM9SF1-203ENST00000524835 TSPY4P0CV99 314 aa28■■■□□ 2.07
TM9SF1-203ENST00000524835 TSPY10P0CW01 314 aa28■■■□□ 2.07
TM9SF1-203ENST00000524835 RSPH4AQ5TD94 716 aa28■■■□□ 2.07
TM9SF1-203ENST00000524835 ANKRD50Q9ULJ7 1429 aa28■■■□□ 2.07
TM9SF1-203ENST00000524835 MAST1Q9Y2H9 1570 aa27.97■■■□□ 2.07
TM9SF1-203ENST00000524835 ARAP3Q8WWN8 1544 aa27.96■■■□□ 2.07
TM9SF1-203ENST00000524835 PZPP20742 1482 aa27.96■■■□□ 2.07
TM9SF1-203ENST00000524835 TONSLQ96HA7 1378 aa27.94■■■□□ 2.06
TM9SF1-203ENST00000524835 KIF15Q9NS87 1388 aa27.94■■■□□ 2.06
TM9SF1-203ENST00000524835 ARHGEF12Q9NZN5 1544 aa27.94■■■□□ 2.06
TM9SF1-203ENST00000524835 PPP1R15AO75807 674 aaPredicted RBP27.92■■■□□ 2.06
TM9SF1-203ENST00000524835 ABCC1P33527 1531 aa27.92■■■□□ 2.06
TM9SF1-203ENST00000524835 ASXL2Q76L83 1435 aa27.92■■■□□ 2.06
TM9SF1-203ENST00000524835 ABCA9Q8IUA7 1624 aa27.91■■■□□ 2.06
TM9SF1-203ENST00000524835 EFCAB2Q5VUJ9 269 aa27.9■■■□□ 2.06
TM9SF1-203ENST00000524835 SLC4A1APQ9BWU0 796 aaKnown RBP27.88■■■□□ 2.05
TM9SF1-203ENST00000524835 ANKRD30BQ9BXX2 1392 aa27.88■■■□□ 2.05
TM9SF1-203ENST00000524835 PLXNC1O60486 1568 aa27.87■■■□□ 2.05
TM9SF1-203ENST00000524835 FOXD1Q16676 465 aa27.86■■■□□ 2.05
TM9SF1-203ENST00000524835 KDM5DQ9BY66 1539 aa27.86■■■□□ 2.05
TM9SF1-203ENST00000524835 RPRD2Q5VT52 1461 aaKnown RBP27.8■■■□□ 2.04
TM9SF1-203ENST00000524835 TRAPPC8Q9Y2L5 1435 aa27.79■■■□□ 2.04
TM9SF1-203ENST00000524835 NPM1P06748 294 aaKnown RBP eCLIP27.78■■■□□ 2.04
TM9SF1-203ENST00000524835 FANCAO15360 1455 aa27.77■■■□□ 2.04
TM9SF1-203ENST00000524835 NUP155O75694 1391 aa27.77■■■□□ 2.04
TM9SF1-203ENST00000524835 DUOX2Q9NRD8 1548 aa27.73■■■□□ 2.03
TM9SF1-203ENST00000524835 UNC13BO14795 1591 aa27.73■■■□□ 2.03
TM9SF1-203ENST00000524835 PKD2Q13563 968 aa27.72■■■□□ 2.03
TM9SF1-203ENST00000524835 TEX14Q8IWB6 1497 aa27.7■■■□□ 2.03
TM9SF1-203ENST00000524835 ZFYVE16Q7Z3T8 1539 aa27.69■■■□□ 2.02
TM9SF1-203ENST00000524835 RTEL1-TNFRSF6BF6WH68 1400 aa27.68■■■□□ 2.02
TM9SF1-203ENST00000524835 ERBINQ96RT1 1412 aa27.68■■■□□ 2.02
TM9SF1-203ENST00000524835 FAM135AQ9P2D6 1515 aa27.68■■■□□ 2.02
TM9SF1-203ENST00000524835 L3MBTL2Q969R5 705 aa27.66■■■□□ 2.02
TM9SF1-203ENST00000524835 ADGRL1O94910 1474 aa27.66■■■□□ 2.02
TM9SF1-203ENST00000524835 SPAG9O60271 1321 aaKnown RBP27.64■■■□□ 2.01
TM9SF1-203ENST00000524835 INO80Q9ULG1 1556 aaPredicted RBP27.63■■■□□ 2.01
TM9SF1-203ENST00000524835 AFAP1Q8N556 730 aa27.63■■■□□ 2.01
TM9SF1-203ENST00000524835 RIMBP3CA6NJZ7 1639 aa27.63■■■□□ 2.01
TM9SF1-203ENST00000524835 RIMBP3BA6NNM3 1639 aa27.63■■■□□ 2.01
TM9SF1-203ENST00000524835 RIMBP3Q9UFD9 1639 aa27.63■■■□□ 2.01
TM9SF1-203ENST00000524835 MAGI2Q86UL8 1455 aa27.63■■■□□ 2.01
TM9SF1-203ENST00000524835 SCAPERQ9BY12 1400 aa27.61■■■□□ 2.01
TM9SF1-203ENST00000524835 IQGAP3Q86VI3 1631 aa27.61■■■□□ 2.01
TM9SF1-203ENST00000524835 ATP7AQ04656 1500 aa27.59■■■□□ 2.01
TM9SF1-203ENST00000524835 CD109Q6YHK3 1445 aa27.59■■■□□ 2.01
TM9SF1-203ENST00000524835 MIER1Q8N108 512 aa27.58■■■□□ 2.01
TM9SF1-203ENST00000524835 CFAP74Q9C0B2 1584 aa27.57■■■□□ 2
TM9SF1-203ENST00000524835 CYB5RLQ6IPT4 315 aa27.53■■■□□ 2
TM9SF1-203ENST00000524835 ZNF518AQ6AHZ1 1483 aa27.49■■□□□ 1.99
TM9SF1-203ENST00000524835 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.49■■□□□ 1.99
TM9SF1-203ENST00000524835 HIRIP3Q9BW71 556 aaPredicted RBP27.48■■□□□ 1.99
TM9SF1-203ENST00000524835 DEPDC5O75140 1603 aa27.48■■□□□ 1.99
TM9SF1-203ENST00000524835 NBPF8Q3BBV2 869 aa27.47■■□□□ 1.99
TM9SF1-203ENST00000524835 KIDINS220Q9ULH0 1771 aa27.46■■□□□ 1.99
TM9SF1-203ENST00000524835 POGZQ7Z3K3 1410 aa27.46■■□□□ 1.99
TM9SF1-203ENST00000524835 KDM5CP41229 1560 aa27.45■■□□□ 1.99
TM9SF1-203ENST00000524835 PLA2R1Q13018 1463 aa27.45■■□□□ 1.98
TM9SF1-203ENST00000524835 NEO1Q92859 1461 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms