RNA–Protein interactions for RNA: ENST00000524112.1

CSGALNACT1-215, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-215ENST00000524112 ZFYVE16Q7Z3T8 1539 aa14.86□□□□□ -0.03
CSGALNACT1-215ENST00000524112 HSPA2P54652 639 aa14.83□□□□□ -0.04
CSGALNACT1-215ENST00000524112 ARHGEF12Q9NZN5 1544 aa14.82□□□□□ -0.04
CSGALNACT1-215ENST00000524112 UHRF1BP1Q6BDS2 1440 aa14.82□□□□□ -0.04
CSGALNACT1-215ENST00000524112 RAPGEF6Q8TEU7 1601 aa14.81□□□□□ -0.04
CSGALNACT1-215ENST00000524112 PRXQ9BXM0 1461 aa14.8□□□□□ -0.04
CSGALNACT1-215ENST00000524112 PLEKHD1A6NEE1 506 aa14.78□□□□□ -0.04
CSGALNACT1-215ENST00000524112 STRCQ7RTU9 1775 aa14.78□□□□□ -0.04
CSGALNACT1-215ENST00000524112 C9orf84Q5VXU9 1444 aa14.77□□□□□ -0.04
CSGALNACT1-215ENST00000524112 SAMD9Q5K651 1589 aa14.77□□□□□ -0.05
CSGALNACT1-215ENST00000524112 ATP10AO60312 1499 aa14.76□□□□□ -0.05
CSGALNACT1-215ENST00000524112 SCAF1Q9H7N4 1312 aaKnown RBP14.76□□□□□ -0.05
CSGALNACT1-215ENST00000524112 REREQ9P2R6 1566 aa14.74□□□□□ -0.05
CSGALNACT1-215ENST00000524112 NUP153P49790 1475 aaKnown RBP14.71□□□□□ -0.05
CSGALNACT1-215ENST00000524112 HECW1Q76N89 1606 aa14.71□□□□□ -0.05
CSGALNACT1-215ENST00000524112 LTBP4Q8N2S1 1624 aa14.7□□□□□ -0.06
CSGALNACT1-215ENST00000524112 CNTLNQ9NXG0 1405 aa14.7□□□□□ -0.06
CSGALNACT1-215ENST00000524112 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.7□□□□□ -0.06
CSGALNACT1-215ENST00000524112 ZNF518AQ6AHZ1 1483 aa14.69□□□□□ -0.06
CSGALNACT1-215ENST00000524112 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.69□□□□□ -0.06
CSGALNACT1-215ENST00000524112 HNRNPUL2Q1KMD3 747 aaKnown RBP14.69□□□□□ -0.06
CSGALNACT1-215ENST00000524112 PLCH2O75038 1416 aa14.68□□□□□ -0.06
CSGALNACT1-215ENST00000524112 AGLP35573 1532 aa14.68□□□□□ -0.06
CSGALNACT1-215ENST00000524112 TRAPPC8Q9Y2L5 1435 aa14.67□□□□□ -0.06
CSGALNACT1-215ENST00000524112 NPATQ14207 1427 aa14.66□□□□□ -0.06
CSGALNACT1-215ENST00000524112 NCOA1Q15788 1441 aa14.66□□□□□ -0.06
CSGALNACT1-215ENST00000524112 SCAPERQ9BY12 1400 aa14.66□□□□□ -0.06
CSGALNACT1-215ENST00000524112 SIGLEC1Q9BZZ2 1709 aa14.64□□□□□ -0.07
CSGALNACT1-215ENST00000524112 EFCAB2Q5VUJ9 269 aa14.64□□□□□ -0.07
CSGALNACT1-215ENST00000524112 KDM5CP41229 1560 aa14.64□□□□□ -0.07
CSGALNACT1-215ENST00000524112 ESF1Q9H501 851 aaKnown RBP14.63□□□□□ -0.07
CSGALNACT1-215ENST00000524112 PKD2Q13563 968 aa14.61□□□□□ -0.07
CSGALNACT1-215ENST00000524112 CDK11AQ9UQ88 783 aaPredicted RBP14.61□□□□□ -0.07
CSGALNACT1-215ENST00000524112 PLA2R1Q13018 1463 aa14.61□□□□□ -0.07
CSGALNACT1-215ENST00000524112 MYO5CQ9NQX4 1742 aa14.61□□□□□ -0.07
CSGALNACT1-215ENST00000524112 MROH2AA6NES4 1674 aa14.6□□□□□ -0.07
CSGALNACT1-215ENST00000524112 C3P01024 1663 aa14.59□□□□□ -0.07
CSGALNACT1-215ENST00000524112 MLH3Q9UHC1 1453 aa14.59□□□□□ -0.07
CSGALNACT1-215ENST00000524112 MLECQ14165 292 aa14.59□□□□□ -0.07
CSGALNACT1-215ENST00000524112 ARID3CA6NKF2 412 aa14.57□□□□□ -0.08
CSGALNACT1-215ENST00000524112 MAPK8IP2Q13387 824 aaPredicted RBP14.56□□□□□ -0.08
CSGALNACT1-215ENST00000524112 EEA1Q15075 1411 aa14.56□□□□□ -0.08
CSGALNACT1-215ENST00000524112 UBAP1LF5GYI3 381 aa14.54□□□□□ -0.08
CSGALNACT1-215ENST00000524112 ZNF142P52746 1687 aaPredicted RBP14.53□□□□□ -0.08
CSGALNACT1-215ENST00000524112 P3H3Q8IVL6 736 aa14.53□□□□□ -0.08
CSGALNACT1-215ENST00000524112 DIP2CQ9Y2E4 1556 aa14.52□□□□□ -0.08
CSGALNACT1-215ENST00000524112 TOM1O60784 492 aa14.52□□□□□ -0.09
CSGALNACT1-215ENST00000524112 CAMSAP1Q5T5Y3 1602 aa14.52□□□□□ -0.09
CSGALNACT1-215ENST00000524112 MED1Q15648 1581 aaPredicted RBP14.51□□□□□ -0.09
CSGALNACT1-215ENST00000524112 CPS1P31327 1500 aa14.51□□□□□ -0.09
CSGALNACT1-215ENST00000524112 CEBPAP49715 358 aaPredicted RBP14.51□□□□□ -0.09
CSGALNACT1-215ENST00000524112 KIF14Q15058 1648 aa14.51□□□□□ -0.09
CSGALNACT1-215ENST00000524112 CLIP1P30622 1438 aa14.5□□□□□ -0.09
CSGALNACT1-215ENST00000524112 TCOF1Q13428 1488 aaKnown RBP14.5□□□□□ -0.09
CSGALNACT1-215ENST00000524112 FMN1Q68DA7 1419 aa14.49□□□□□ -0.09
CSGALNACT1-215ENST00000524112 CSRNP3Q8WYN3 585 aa14.48□□□□□ -0.09
CSGALNACT1-215ENST00000524112 PTPRKQ15262 1439 aa14.48□□□□□ -0.09
CSGALNACT1-215ENST00000524112 ARHGAP5Q13017 1502 aa14.46□□□□□ -0.09
CSGALNACT1-215ENST00000524112 ABCA6Q8N139 1617 aa14.44□□□□□ -0.1
CSGALNACT1-215ENST00000524112 TROQ12816 1431 aaPredicted RBP14.44□□□□□ -0.1
CSGALNACT1-215ENST00000524112 SUPT6HQ7KZ85 1726 aaKnown RBP14.44□□□□□ -0.1
CSGALNACT1-215ENST00000524112 FAM135AQ9P2D6 1515 aa14.42□□□□□ -0.1
CSGALNACT1-215ENST00000524112 ZMYM3Q14202 1370 aa14.42□□□□□ -0.1
CSGALNACT1-215ENST00000524112 CEP170BQ9Y4F5 1589 aaPredicted RBP14.42□□□□□ -0.1
CSGALNACT1-215ENST00000524112 ZNF335Q9H4Z2 1342 aaPredicted RBP14.41□□□□□ -0.1
CSGALNACT1-215ENST00000524112 MYT1LQ9UL68 1186 aa14.41□□□□□ -0.1
CSGALNACT1-215ENST00000524112 MYO3AQ8NEV4 1616 aa14.41□□□□□ -0.1
CSGALNACT1-215ENST00000524112 ABCC1P33527 1531 aa14.41□□□□□ -0.1
CSGALNACT1-215ENST00000524112 AFAP1Q8N556 730 aa14.4□□□□□ -0.1
CSGALNACT1-215ENST00000524112 CDK13Q14004 1512 aaKnown RBP14.39□□□□□ -0.11
CSGALNACT1-215ENST00000524112 PREX2Q70Z35 1606 aa14.38□□□□□ -0.11
CSGALNACT1-215ENST00000524112 KIDINS220Q9ULH0 1771 aa14.37□□□□□ -0.11
CSGALNACT1-215ENST00000524112 ITSN2Q9NZM3 1697 aa14.37□□□□□ -0.11
CSGALNACT1-215ENST00000524112 HSPA1LP34931 641 aa14.36□□□□□ -0.11
CSGALNACT1-215ENST00000524112 A2ML1A8K2U0 1454 aa14.36□□□□□ -0.11
CSGALNACT1-215ENST00000524112 POLR1AO95602 1720 aaPredicted RBP14.35□□□□□ -0.11
CSGALNACT1-215ENST00000524112 CDC42BPBQ9Y5S2 1711 aa14.35□□□□□ -0.11
CSGALNACT1-215ENST00000524112 PLEKHH2Q8IVE3 1493 aa14.35□□□□□ -0.11
CSGALNACT1-215ENST00000524112 SHANK2Q9UPX8 1470 aa14.35□□□□□ -0.11
CSGALNACT1-215ENST00000524112 CCDC18Q5T9S5 1454 aa14.33□□□□□ -0.12
CSGALNACT1-215ENST00000524112 PPP4R3CPQ6ZMV5 832 aa14.33□□□□□ -0.12
CSGALNACT1-215ENST00000524112 PLXNC1O60486 1568 aa14.33□□□□□ -0.12
CSGALNACT1-215ENST00000524112 NCKAP5LQ9HCH0 1330 aa14.33□□□□□ -0.12
CSGALNACT1-215ENST00000524112 KIAA1107Q9UPP5 1409 aa14.32□□□□□ -0.12
CSGALNACT1-215ENST00000524112 DEPDC5O75140 1603 aa14.3□□□□□ -0.12
CSGALNACT1-215ENST00000524112 MED14O60244 1454 aa14.3□□□□□ -0.12
CSGALNACT1-215ENST00000524112 SYNMO15061 1565 aa14.3□□□□□ -0.12
CSGALNACT1-215ENST00000524112 SAMD9LQ8IVG5 1584 aa14.29□□□□□ -0.12
CSGALNACT1-215ENST00000524112 DNMT1P26358 1616 aaKnown RBP14.29□□□□□ -0.12
CSGALNACT1-215ENST00000524112 CLTCQ00610 1675 aaKnown RBP14.28□□□□□ -0.12
CSGALNACT1-215ENST00000524112 ADGBQ8N7X0 1667 aa14.27□□□□□ -0.12
CSGALNACT1-215ENST00000524112 NLRP1Q9C000 1473 aa14.27□□□□□ -0.12
CSGALNACT1-215ENST00000524112 SPAG9O60271 1321 aaKnown RBP14.27□□□□□ -0.12
CSGALNACT1-215ENST00000524112 ANKLE2Q86XL3 938 aa14.27□□□□□ -0.13
CSGALNACT1-215ENST00000524112 RNF17Q9BXT8 1623 aaKnown RBP14.26□□□□□ -0.13
CSGALNACT1-215ENST00000524112 ATP7AQ04656 1500 aa14.26□□□□□ -0.13
CSGALNACT1-215ENST00000524112 A2MP01023 1474 aa14.26□□□□□ -0.13
CSGALNACT1-215ENST00000524112 THEMISQ8N1K5 641 aaPredicted RBP14.26□□□□□ -0.13
CSGALNACT1-215ENST00000524112 PIP4K2BP78356 416 aa14.25□□□□□ -0.13
CSGALNACT1-215ENST00000524112 NEURL4Q96JN8 1562 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms