RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 ZMYM4Q5VZL5 1548 aa16.82■□□□□ 0.28
LAMA4-220ENST00000523765 FANCAO15360 1455 aa16.82■□□□□ 0.28
LAMA4-220ENST00000523765 NUP153P49790 1475 aaKnown RBP16.82■□□□□ 0.28
LAMA4-220ENST00000523765 FHOD3Q2V2M9 1422 aa16.82■□□□□ 0.28
LAMA4-220ENST00000523765 AKNAQ7Z591 1439 aa16.82■□□□□ 0.28
LAMA4-220ENST00000523765 ZFYVE16Q7Z3T8 1539 aa16.81■□□□□ 0.28
LAMA4-220ENST00000523765 HECW1Q76N89 1606 aa16.8■□□□□ 0.28
LAMA4-220ENST00000523765 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.79■□□□□ 0.28
LAMA4-220ENST00000523765 HNRNPUL2Q1KMD3 747 aaKnown RBP16.79■□□□□ 0.28
LAMA4-220ENST00000523765 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.79■□□□□ 0.28
LAMA4-220ENST00000523765 CEBPAP49715 358 aaPredicted RBP16.77■□□□□ 0.28
LAMA4-220ENST00000523765 POGZQ7Z3K3 1410 aa16.77■□□□□ 0.27
LAMA4-220ENST00000523765 CFAP74Q9C0B2 1584 aa16.77■□□□□ 0.27
LAMA4-220ENST00000523765 EFCAB5A4FU69 1503 aa16.76■□□□□ 0.27
LAMA4-220ENST00000523765 ARHGEF12Q9NZN5 1544 aa16.76■□□□□ 0.27
LAMA4-220ENST00000523765 LTBP4Q8N2S1 1624 aa16.7■□□□□ 0.26
LAMA4-220ENST00000523765 MAGI2Q86UL8 1455 aa16.69■□□□□ 0.26
LAMA4-220ENST00000523765 RANGAP1P46060 587 aaPredicted RBP16.66■□□□□ 0.26
LAMA4-220ENST00000523765 FAM9AQ8IZU1 332 aaPredicted RBP16.66■□□□□ 0.26
LAMA4-220ENST00000523765 SCAPERQ9BY12 1400 aa16.66■□□□□ 0.26
LAMA4-220ENST00000523765 ATP10AO60312 1499 aa16.66■□□□□ 0.26
LAMA4-220ENST00000523765 PLEKHD1A6NEE1 506 aa16.65■□□□□ 0.26
LAMA4-220ENST00000523765 C3P01024 1663 aa16.65■□□□□ 0.26
LAMA4-220ENST00000523765 C9orf84Q5VXU9 1444 aa16.64■□□□□ 0.25
LAMA4-220ENST00000523765 CDK13Q14004 1512 aaKnown RBP16.64■□□□□ 0.25
LAMA4-220ENST00000523765 UHRF1BP1Q6BDS2 1440 aa16.63■□□□□ 0.25
LAMA4-220ENST00000523765 PTPRTO14522 1441 aa16.62■□□□□ 0.25
LAMA4-220ENST00000523765 PLCH2O75038 1416 aa16.6■□□□□ 0.25
LAMA4-220ENST00000523765 DIP2CQ9Y2E4 1556 aa16.58■□□□□ 0.24
LAMA4-220ENST00000523765 MYO5CQ9NQX4 1742 aa16.58■□□□□ 0.24
LAMA4-220ENST00000523765 SETD1BQ9UPS6 1966 aaKnown RBP16.57■□□□□ 0.24
LAMA4-220ENST00000523765 KIF14Q15058 1648 aa16.56■□□□□ 0.24
LAMA4-220ENST00000523765 ABCA6Q8N139 1617 aa16.56■□□□□ 0.24
LAMA4-220ENST00000523765 KDM5CP41229 1560 aa16.55■□□□□ 0.24
LAMA4-220ENST00000523765 IQSEC2Q5JU85 1478 aa16.54■□□□□ 0.24
LAMA4-220ENST00000523765 AFAP1Q8N556 730 aa16.53■□□□□ 0.24
LAMA4-220ENST00000523765 NCOA1Q15788 1441 aa16.53■□□□□ 0.24
LAMA4-220ENST00000523765 CNKSR2Q8WXI2 1034 aa16.51■□□□□ 0.23
LAMA4-220ENST00000523765 CSRNP3Q8WYN3 585 aa16.51■□□□□ 0.23
LAMA4-220ENST00000523765 ZNF518AQ6AHZ1 1483 aa16.5■□□□□ 0.23
LAMA4-220ENST00000523765 REREQ9P2R6 1566 aa16.5■□□□□ 0.23
LAMA4-220ENST00000523765 CAMSAP1Q5T5Y3 1602 aa16.49■□□□□ 0.23
LAMA4-220ENST00000523765 HOXD11P31277 338 aaPredicted RBP16.49■□□□□ 0.23
LAMA4-220ENST00000523765 ZNF335Q9H4Z2 1342 aaPredicted RBP16.48■□□□□ 0.23
LAMA4-220ENST00000523765 TRAPPC8Q9Y2L5 1435 aa16.47■□□□□ 0.23
LAMA4-220ENST00000523765 EFCAB2Q5VUJ9 269 aa16.47■□□□□ 0.23
LAMA4-220ENST00000523765 LRRIQ1Q96JM4 1722 aa16.47■□□□□ 0.23
LAMA4-220ENST00000523765 CDC42BPBQ9Y5S2 1711 aa16.47■□□□□ 0.23
LAMA4-220ENST00000523765 UBAP1LF5GYI3 381 aa16.46■□□□□ 0.23
LAMA4-220ENST00000523765 NCKAP5LQ9HCH0 1330 aa16.45■□□□□ 0.22
LAMA4-220ENST00000523765 ARHGAP5Q13017 1502 aa16.45■□□□□ 0.22
LAMA4-220ENST00000523765 MED1Q15648 1581 aaPredicted RBP16.44■□□□□ 0.22
LAMA4-220ENST00000523765 KIDINS220Q9ULH0 1771 aa16.43■□□□□ 0.22
LAMA4-220ENST00000523765 AGLP35573 1532 aa16.43■□□□□ 0.22
LAMA4-220ENST00000523765 MYT1LQ9UL68 1186 aa16.42■□□□□ 0.22
LAMA4-220ENST00000523765 MLH3Q9UHC1 1453 aa16.42■□□□□ 0.22
LAMA4-220ENST00000523765 ITSN2Q9NZM3 1697 aa16.41■□□□□ 0.22
LAMA4-220ENST00000523765 SUPT6HQ7KZ85 1726 aaKnown RBP16.39■□□□□ 0.21
LAMA4-220ENST00000523765 ATP1B4Q9UN42 357 aaPredicted RBP16.39■□□□□ 0.21
LAMA4-220ENST00000523765 MROH2AA6NES4 1674 aa16.39■□□□□ 0.21
LAMA4-220ENST00000523765 ABCC1P33527 1531 aa16.39■□□□□ 0.21
LAMA4-220ENST00000523765 MYO3AQ8NEV4 1616 aa16.38■□□□□ 0.21
LAMA4-220ENST00000523765 ZNF142P52746 1687 aaPredicted RBP16.38■□□□□ 0.21
LAMA4-220ENST00000523765 HSPA1LP34931 641 aa16.37■□□□□ 0.21
LAMA4-220ENST00000523765 PREX2Q70Z35 1606 aa16.37■□□□□ 0.21
LAMA4-220ENST00000523765 CLTCQ00610 1675 aaKnown RBP16.37■□□□□ 0.21
LAMA4-220ENST00000523765 TROQ12816 1431 aaPredicted RBP16.36■□□□□ 0.21
LAMA4-220ENST00000523765 ESF1Q9H501 851 aaKnown RBP16.35■□□□□ 0.21
LAMA4-220ENST00000523765 NPATQ14207 1427 aa16.35■□□□□ 0.21
LAMA4-220ENST00000523765 TCOF1Q13428 1488 aaKnown RBP16.35■□□□□ 0.21
LAMA4-220ENST00000523765 RNF216Q9NWF9 866 aaPredicted RBP16.34■□□□□ 0.21
LAMA4-220ENST00000523765 CNTLNQ9NXG0 1405 aa16.34■□□□□ 0.21
LAMA4-220ENST00000523765 CEP170BQ9Y4F5 1589 aaPredicted RBP16.34■□□□□ 0.21
LAMA4-220ENST00000523765 ZMYM3Q14202 1370 aa16.32■□□□□ 0.2
LAMA4-220ENST00000523765 CDC42BPAQ5VT25 1732 aa16.32■□□□□ 0.2
LAMA4-220ENST00000523765 ARHGAP35Q9NRY4 1499 aa16.32■□□□□ 0.2
LAMA4-220ENST00000523765 PIP4K2BP78356 416 aa16.31■□□□□ 0.2
LAMA4-220ENST00000523765 NCBP3Q53F19 620 aaKnown RBP16.31■□□□□ 0.2
LAMA4-220ENST00000523765 EHMT2Q96KQ7 1210 aa16.31■□□□□ 0.2
LAMA4-220ENST00000523765 SAMD9LQ8IVG5 1584 aa16.3■□□□□ 0.2
LAMA4-220ENST00000523765 PLA2R1Q13018 1463 aa16.3■□□□□ 0.2
LAMA4-220ENST00000523765 ALKQ9UM73 1620 aa16.3■□□□□ 0.2
LAMA4-220ENST00000523765 PTPRKQ15262 1439 aa16.28■□□□□ 0.2
LAMA4-220ENST00000523765 FMN1Q68DA7 1419 aa16.28■□□□□ 0.2
LAMA4-220ENST00000523765 NEURL4Q96JN8 1562 aa16.26■□□□□ 0.19
LAMA4-220ENST00000523765 PKD2Q13563 968 aa16.26■□□□□ 0.19
LAMA4-220ENST00000523765 CDK11AQ9UQ88 783 aaPredicted RBP16.26■□□□□ 0.19
LAMA4-220ENST00000523765 CLIP1P30622 1438 aa16.26■□□□□ 0.19
LAMA4-220ENST00000523765 EEA1Q15075 1411 aa16.26■□□□□ 0.19
LAMA4-220ENST00000523765 DNMT1P26358 1616 aaKnown RBP16.26■□□□□ 0.19
LAMA4-220ENST00000523765 PLXNC1O60486 1568 aa16.25■□□□□ 0.19
LAMA4-220ENST00000523765 POLR1AO95602 1720 aaPredicted RBP16.25■□□□□ 0.19
LAMA4-220ENST00000523765 SYCP2Q9BX26 1530 aa16.24■□□□□ 0.19
LAMA4-220ENST00000523765 INO80Q9ULG1 1556 aaPredicted RBP16.21■□□□□ 0.18
LAMA4-220ENST00000523765 ATP7AQ04656 1500 aa16.2■□□□□ 0.18
LAMA4-220ENST00000523765 VWDEQ8N2E2 1590 aa16.19■□□□□ 0.18
LAMA4-220ENST00000523765 SHANK2Q9UPX8 1470 aa16.19■□□□□ 0.18
LAMA4-220ENST00000523765 HNRNPMP52272 730 aaKnown RBP eCLIP16.19■□□□□ 0.18
LAMA4-220ENST00000523765 CPS1P31327 1500 aa16.19■□□□□ 0.18
LAMA4-220ENST00000523765 STRCP1A6NGW2 1772 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms