RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 NEUROD2Q15784 382 aa15.55■□□□□ 0.08
EXTL3-214ENST00000523271 CSRNP3Q8WYN3 585 aa15.54■□□□□ 0.08
EXTL3-214ENST00000523271 TPM2P07951 284 aa15.54■□□□□ 0.08
EXTL3-214ENST00000523271 GPATCH3Q96I76 525 aa15.54■□□□□ 0.08
EXTL3-214ENST00000523271 TPM1P09493 284 aa15.54■□□□□ 0.08
EXTL3-214ENST00000523271 ZNF771Q7L3S4 317 aaPredicted RBP15.54■□□□□ 0.08
EXTL3-214ENST00000523271 CREBRFQ8IUR6 639 aa15.53■□□□□ 0.08
EXTL3-214ENST00000523271 GZF1Q9H116 711 aaPredicted RBP15.53■□□□□ 0.08
EXTL3-214ENST00000523271 MTUS2Q5JR59 1369 aa15.51■□□□□ 0.07
EXTL3-214ENST00000523271 KIF3AQ9Y496 699 aa15.51■□□□□ 0.07
EXTL3-214ENST00000523271 CDR1P51861 262 aa15.5■□□□□ 0.07
EXTL3-214ENST00000523271 TPD52L1Q16890 204 aaPredicted RBP15.5■□□□□ 0.07
EXTL3-214ENST00000523271 APPP05067 770 aa15.49■□□□□ 0.07
EXTL3-214ENST00000523271 IPO8O15397 1037 aaKnown RBP15.48■□□□□ 0.07
EXTL3-214ENST00000523271 FBXO3Q9UK99 471 aa15.47■□□□□ 0.07
EXTL3-214ENST00000523271 LMOD2Q6P5Q4 547 aa15.47■□□□□ 0.07
EXTL3-214ENST00000523271 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.47■□□□□ 0.07
EXTL3-214ENST00000523271 CCAR2Q8N163 923 aaKnown RBP15.47■□□□□ 0.07
EXTL3-214ENST00000523271 CCDC191Q8NCU4 936 aa15.46■□□□□ 0.07
EXTL3-214ENST00000523271 PES1O00541 588 aaKnown RBP15.46■□□□□ 0.07
EXTL3-214ENST00000523271 MAP7D2Q96T17 732 aa15.46■□□□□ 0.07
EXTL3-214ENST00000523271 AK7Q96M32 723 aa15.45■□□□□ 0.06
EXTL3-214ENST00000523271 CHMP4AQ9BY43 222 aa15.45■□□□□ 0.06
EXTL3-214ENST00000523271 U2SURPO15042 1029 aaKnown RBP15.45■□□□□ 0.06
EXTL3-214ENST00000523271 GOLGA6L19H0YKK7 550 aa15.44■□□□□ 0.06
EXTL3-214ENST00000523271 NACADO15069 1562 aa15.44■□□□□ 0.06
EXTL3-214ENST00000523271 RTF1Q92541 710 aaKnown RBP15.44■□□□□ 0.06
EXTL3-214ENST00000523271 IPO7O95373 1038 aaKnown RBP15.44■□□□□ 0.06
EXTL3-214ENST00000523271 POGKQ9P215 609 aa15.44■□□□□ 0.06
EXTL3-214ENST00000523271 HIRIP3Q9BW71 556 aaPredicted RBP15.43■□□□□ 0.06
EXTL3-214ENST00000523271 TAF7LQ5H9L4 462 aa15.43■□□□□ 0.06
EXTL3-214ENST00000523271 TCERG1O14776 1098 aaKnown RBP15.43■□□□□ 0.06
EXTL3-214ENST00000523271 CHMP4CQ96CF2 233 aa15.43■□□□□ 0.06
EXTL3-214ENST00000523271 RUFY1Q96T51 708 aa15.43■□□□□ 0.06
EXTL3-214ENST00000523271 MARCH6O60337 910 aa15.43■□□□□ 0.06
EXTL3-214ENST00000523271 DCTN1Q14203 1278 aa15.42■□□□□ 0.06
EXTL3-214ENST00000523271 VPS53Q5VIR6 699 aa15.42■□□□□ 0.06
EXTL3-214ENST00000523271 HDAC5Q9UQL6 1122 aa15.42■□□□□ 0.06
EXTL3-214ENST00000523271 ACBD3Q9H3P7 528 aa15.41■□□□□ 0.06
EXTL3-214ENST00000523271 B4GALNT3Q6L9W6 998 aa15.41■□□□□ 0.06
EXTL3-214ENST00000523271 GORABQ5T7V8 394 aa15.41■□□□□ 0.06
EXTL3-214ENST00000523271 KIF16BQ96L93 1317 aa15.41■□□□□ 0.06
EXTL3-214ENST00000523271 DDX11L8A8MPP1 907 aa15.4■□□□□ 0.06
EXTL3-214ENST00000523271 SF3A1Q15459 793 aaKnown RBP15.4■□□□□ 0.06
EXTL3-214ENST00000523271 CARD11Q9BXL7 1154 aa15.4■□□□□ 0.06
EXTL3-214ENST00000523271 RB1CC1Q8TDY2 1594 aa15.39■□□□□ 0.05
EXTL3-214ENST00000523271 RDXP35241 583 aaKnown RBP15.39■□□□□ 0.05
EXTL3-214ENST00000523271 SENP3Q9H4L4 574 aaPredicted RBP15.39■□□□□ 0.05
EXTL3-214ENST00000523271 VSIG10Q8N0Z9 540 aa15.38■□□□□ 0.05
EXTL3-214ENST00000523271 CWC15Q9P013 229 aaKnown RBP15.38■□□□□ 0.05
EXTL3-214ENST00000523271 ST18O60284 1047 aa15.38■□□□□ 0.05
EXTL3-214ENST00000523271 STK11IPQ8N1F8 1099 aa15.37■□□□□ 0.05
EXTL3-214ENST00000523271 SLKQ9H2G2 1235 aaPredicted RBP15.37■□□□□ 0.05
EXTL3-214ENST00000523271 RWDD1Q9H446 243 aaPredicted RBP15.37■□□□□ 0.05
EXTL3-214ENST00000523271 ANKRD20A12PQ8NF67 263 aa15.37■□□□□ 0.05
EXTL3-214ENST00000523271 TCEAL9Q9UHQ7 104 aa15.37■□□□□ 0.05
EXTL3-214ENST00000523271 CNKSR2Q8WXI2 1034 aa15.37■□□□□ 0.05
EXTL3-214ENST00000523271 ATP6V1DQ9Y5K8 247 aa15.37■□□□□ 0.05
EXTL3-214ENST00000523271 RSF1Q96T23 1441 aaPredicted RBP15.37■□□□□ 0.05
EXTL3-214ENST00000523271 RGL3Q3MIN7 710 aa15.36■□□□□ 0.05
EXTL3-214ENST00000523271 G3V3G9 751 aa15.35■□□□□ 0.05
EXTL3-214ENST00000523271 DCAF8Q5TAQ9 597 aa15.35■□□□□ 0.05
EXTL3-214ENST00000523271 BECN2A8MW95 431 aa15.35■□□□□ 0.05
EXTL3-214ENST00000523271 ZRSR2Q15696 482 aaKnown RBP15.34■□□□□ 0.05
EXTL3-214ENST00000523271 TRIM6-TRIM34B2RNG4 842 aa15.34■□□□□ 0.05
EXTL3-214ENST00000523271 ARGLU1Q9NWB6 273 aaPredicted RBP15.34■□□□□ 0.05
EXTL3-214ENST00000523271 H3BQV1 296 aa15.33■□□□□ 0.05
EXTL3-214ENST00000523271 IFFO2Q5TF58 517 aa15.33■□□□□ 0.05
EXTL3-214ENST00000523271 PMFBP1Q8TBY8 1022 aa15.33■□□□□ 0.05
EXTL3-214ENST00000523271 HOOK1Q9UJC3 728 aaKnown RBP15.33■□□□□ 0.04
EXTL3-214ENST00000523271 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.33■□□□□ 0.042e-6■■■■■ 96.1
EXTL3-214ENST00000523271 HSP90B2PQ58FF3 399 aa15.32■□□□□ 0.04
EXTL3-214ENST00000523271 PABPN1Q86U42 306 aaKnown RBP eCLIP15.32■□□□□ 0.04
EXTL3-214ENST00000523271 ANO8Q9HCE9 1232 aaPredicted RBP15.32■□□□□ 0.04
EXTL3-214ENST00000523271 SKOR2Q2VWA4 1001 aaPredicted RBP15.32■□□□□ 0.04
EXTL3-214ENST00000523271 MYO6Q9UM54 1294 aa15.32■□□□□ 0.04
EXTL3-214ENST00000523271 APBB1O00213 710 aa15.32■□□□□ 0.04
EXTL3-214ENST00000523271 NEXNQ0ZGT2 675 aa15.32■□□□□ 0.04
EXTL3-214ENST00000523271 CC2D1BQ5T0F9 858 aaKnown RBP15.32■□□□□ 0.04
EXTL3-214ENST00000523271 H0YHG0 523 aa15.31■□□□□ 0.04
EXTL3-214ENST00000523271 ODF2Q5BJF6 829 aa15.31■□□□□ 0.04
EXTL3-214ENST00000523271 CCDC47Q96A33 483 aaKnown RBP15.3■□□□□ 0.04
EXTL3-214ENST00000523271 PCMTD1Q96MG8 357 aaPredicted RBP15.3■□□□□ 0.04
EXTL3-214ENST00000523271 RBM19Q9Y4C8 960 aaKnown RBP15.3■□□□□ 0.04
EXTL3-214ENST00000523271 SENP3-EIF4A1A0A087X0R7 540 aa15.3■□□□□ 0.04
EXTL3-214ENST00000523271 AKAP17AQ02040 695 aaKnown RBP15.3■□□□□ 0.04
EXTL3-214ENST00000523271 WWC1Q8IX03 1113 aa15.3■□□□□ 0.04
EXTL3-214ENST00000523271 SCRIBQ14160 1630 aa15.29■□□□□ 0.04
EXTL3-214ENST00000523271 ZNF592Q92610 1267 aa15.29■□□□□ 0.04
EXTL3-214ENST00000523271 RRP7BPQ9NSQ0 103 aa15.29■□□□□ 0.04
EXTL3-214ENST00000523271 CCDC173Q0VFZ6 552 aa15.28■□□□□ 0.04
EXTL3-214ENST00000523271 ITPRIPQ8IWB1 547 aa15.28■□□□□ 0.04
EXTL3-214ENST00000523271 TMF1P82094 1093 aa15.28■□□□□ 0.04
EXTL3-214ENST00000523271 HOMER1Q86YM7 354 aa15.28■□□□□ 0.04
EXTL3-214ENST00000523271 HDGFP51858 240 aaKnown RBP15.27■□□□□ 0.04
EXTL3-214ENST00000523271 ABCC9O60706 1549 aa15.27■□□□□ 0.04
EXTL3-214ENST00000523271 CHMP3Q9Y3E7 222 aa15.27■□□□□ 0.04
EXTL3-214ENST00000523271 SPAG9O60271 1321 aaKnown RBP15.26■□□□□ 0.03
EXTL3-214ENST00000523271 CT47A1Q5JQC4 288 aaPredicted RBP15.26■□□□□ 0.03
EXTL3-214ENST00000523271 MTERF4Q7Z6M4 381 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms