RNA–Protein interactions for RNA: ENST00000522878.5

ARFGEF1-208, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-208ENST00000522878 CUX1P39880 1505 aa10.31□□□□□ -0.76
ARFGEF1-208ENST00000522878 UBAP1LF5GYI3 381 aa10.3□□□□□ -0.76
ARFGEF1-208ENST00000522878 PITPNM1O00562 1244 aa10.3□□□□□ -0.76
ARFGEF1-208ENST00000522878 FER1L4A9Z1Z3 1794 aa10.29□□□□□ -0.76
ARFGEF1-208ENST00000522878 FOXD4L1Q9NU39 408 aa10.29□□□□□ -0.76
ARFGEF1-208ENST00000522878 CCDC88BA6NC98 1476 aa10.29□□□□□ -0.76
ARFGEF1-208ENST00000522878 MAGI3Q5TCQ9 1506 aa10.28□□□□□ -0.76
ARFGEF1-208ENST00000522878 ABCA10Q8WWZ4 1543 aa10.28□□□□□ -0.76
ARFGEF1-208ENST00000522878 TTC37Q6PGP7 1564 aa10.28□□□□□ -0.76
ARFGEF1-208ENST00000522878 SIGLEC1Q9BZZ2 1709 aa10.27□□□□□ -0.76
ARFGEF1-208ENST00000522878 ARAP3Q8WWN8 1544 aa10.26□□□□□ -0.77
ARFGEF1-208ENST00000522878 FHAD1B1AJZ9 1412 aa10.25□□□□□ -0.77
ARFGEF1-208ENST00000522878 FXR2P51116 673 aaKnown RBP eCLIP10.25□□□□□ -0.77
ARFGEF1-208ENST00000522878 ZCCHC11Q5TAX3 1644 aaKnown RBP10.23□□□□□ -0.77
ARFGEF1-208ENST00000522878 UHRF1BP1LA0JNW5 1464 aa10.21□□□□□ -0.78
ARFGEF1-208ENST00000522878 FRMPD1Q5SYB0 1578 aa10.21□□□□□ -0.78
ARFGEF1-208ENST00000522878 KDM5BQ9UGL1 1544 aa10.19□□□□□ -0.78
ARFGEF1-208ENST00000522878 POTEAQ6S8J7 498 aa10.19□□□□□ -0.78
ARFGEF1-208ENST00000522878 ARHGEF40Q8TER5 1519 aa10.18□□□□□ -0.78
ARFGEF1-208ENST00000522878 ALKQ9UM73 1620 aa10.18□□□□□ -0.78
ARFGEF1-208ENST00000522878 EVX2Q03828 476 aa10.16□□□□□ -0.78
ARFGEF1-208ENST00000522878 UPF1Q92900 1129 aaKnown RBP eCLIP10.16□□□□□ -0.78
ARFGEF1-208ENST00000522878 CD109Q6YHK3 1445 aa10.16□□□□□ -0.78
ARFGEF1-208ENST00000522878 PTPRGP23470 1445 aa10.15□□□□□ -0.79
ARFGEF1-208ENST00000522878 ERICH3Q5RHP9 1530 aa10.13□□□□□ -0.79
ARFGEF1-208ENST00000522878 ARID4BQ4LE39 1312 aaPredicted RBP10.13□□□□□ -0.79
ARFGEF1-208ENST00000522878 WDR7Q9Y4E6 1490 aa10.13□□□□□ -0.79
ARFGEF1-208ENST00000522878 ZNF335Q9H4Z2 1342 aaPredicted RBP10.11□□□□□ -0.79
ARFGEF1-208ENST00000522878 NCOA1Q15788 1441 aa10.11□□□□□ -0.79
ARFGEF1-208ENST00000522878 KIAA0556O60303 1618 aa10.11□□□□□ -0.79
ARFGEF1-208ENST00000522878 UHRF1BP1Q6BDS2 1440 aa10.1□□□□□ -0.79
ARFGEF1-208ENST00000522878 PIP4K2BP78356 416 aa10.09□□□□□ -0.79
ARFGEF1-208ENST00000522878 CEP350Q5VT06 3117 aa10.09□□□□□ -0.79
ARFGEF1-208ENST00000522878 RICTORQ6R327 1708 aa10.07□□□□□ -0.8
ARFGEF1-208ENST00000522878 ARHGEF12Q9NZN5 1544 aa10.06□□□□□ -0.8
ARFGEF1-208ENST00000522878 UACAQ9BZF9 1416 aa10.06□□□□□ -0.8
ARFGEF1-208ENST00000522878 FANCAO15360 1455 aa10.05□□□□□ -0.8
ARFGEF1-208ENST00000522878 FKBP8Q14318 412 aa10.05□□□□□ -0.8
ARFGEF1-208ENST00000522878 SETBP1Q9Y6X0 1596 aa10.05□□□□□ -0.8
ARFGEF1-208ENST00000522878 RAPGEF3O95398 923 aa10.04□□□□□ -0.8
ARFGEF1-208ENST00000522878 TNIKQ9UKE5 1360 aa10.03□□□□□ -0.8
ARFGEF1-208ENST00000522878 PRKAR2AP13861 404 aaKnown RBP10.03□□□□□ -0.8
ARFGEF1-208ENST00000522878 POGZQ7Z3K3 1410 aa10.03□□□□□ -0.8
ARFGEF1-208ENST00000522878 SPDYE2BA6NHP3 402 aa10.02□□□□□ -0.81
ARFGEF1-208ENST00000522878 SPDYE6P0CI01 402 aa10.02□□□□□ -0.81
ARFGEF1-208ENST00000522878 SPDYE2Q495Y8 402 aa10.02□□□□□ -0.81
ARFGEF1-208ENST00000522878 C3P01024 1663 aa10.02□□□□□ -0.81
ARFGEF1-208ENST00000522878 CAMSAP1Q5T5Y3 1602 aa10□□□□□ -0.81
ARFGEF1-208ENST00000522878 EP400Q96L91 3159 aa10□□□□□ -0.81
ARFGEF1-208ENST00000522878 TOM1O60784 492 aa9.99□□□□□ -0.81
ARFGEF1-208ENST00000522878 CEBPAP49715 358 aaPredicted RBP9.99□□□□□ -0.81
ARFGEF1-208ENST00000522878 CLEC11AQ9Y240 323 aa9.99□□□□□ -0.81
ARFGEF1-208ENST00000522878 TTBK1Q5TCY1 1321 aaPredicted RBP9.98□□□□□ -0.81
ARFGEF1-208ENST00000522878 PHLDB1Q86UU1 1377 aa9.98□□□□□ -0.81
ARFGEF1-208ENST00000522878 LRP5O75197 1615 aa9.96□□□□□ -0.81
ARFGEF1-208ENST00000522878 ABCA9Q8IUA7 1624 aa9.96□□□□□ -0.82
ARFGEF1-208ENST00000522878 SUPT6HQ7KZ85 1726 aaKnown RBP9.96□□□□□ -0.82
ARFGEF1-208ENST00000522878 SPDYE1Q8NFV5 336 aaPredicted RBP9.95□□□□□ -0.82
ARFGEF1-208ENST00000522878 ZMYM4Q5VZL5 1548 aa9.94□□□□□ -0.82
ARFGEF1-208ENST00000522878 C19orf67A6NJJ6 358 aa9.94□□□□□ -0.82
ARFGEF1-208ENST00000522878 CPS1P31327 1500 aa9.93□□□□□ -0.82
ARFGEF1-208ENST00000522878 NEO1Q92859 1461 aa9.93□□□□□ -0.82
ARFGEF1-208ENST00000522878 RBM33Q96EV2 1170 aaKnown RBP9.92□□□□□ -0.82
ARFGEF1-208ENST00000522878 PTPRKQ15262 1439 aa9.91□□□□□ -0.82
ARFGEF1-208ENST00000522878 AKNAQ7Z591 1439 aa9.91□□□□□ -0.82
ARFGEF1-208ENST00000522878 CARMIL2Q6F5E8 1435 aa9.9□□□□□ -0.82
ARFGEF1-208ENST00000522878 GABBR2O75899 941 aa9.9□□□□□ -0.82
ARFGEF1-208ENST00000522878 ATXN8OSP0DMR3 200 aa9.9□□□□□ -0.82
ARFGEF1-208ENST00000522878 MLECQ14165 292 aa9.9□□□□□ -0.82
ARFGEF1-208ENST00000522878 ZFYVE16Q7Z3T8 1539 aa9.9□□□□□ -0.82
ARFGEF1-208ENST00000522878 LRRC7Q96NW7 1537 aa9.9□□□□□ -0.82
ARFGEF1-208ENST00000522878 RAPGEF6Q8TEU7 1601 aa9.89□□□□□ -0.83
ARFGEF1-208ENST00000522878 EFCAB5A4FU69 1503 aa9.89□□□□□ -0.83
ARFGEF1-208ENST00000522878 DISP1Q96F81 1524 aa9.89□□□□□ -0.83
ARFGEF1-208ENST00000522878 TCOF1Q13428 1488 aaKnown RBP9.89□□□□□ -0.83
ARFGEF1-208ENST00000522878 ZNF142P52746 1687 aaPredicted RBP9.89□□□□□ -0.83
ARFGEF1-208ENST00000522878 LHX8Q68G74 356 aa9.88□□□□□ -0.83
ARFGEF1-208ENST00000522878 KCNH8Q96L42 1107 aa9.88□□□□□ -0.83
ARFGEF1-208ENST00000522878 WRNQ14191 1432 aaPredicted RBP eCLIP9.88□□□□□ -0.83
ARFGEF1-208ENST00000522878 NCKAP5LQ9HCH0 1330 aa9.87□□□□□ -0.83
ARFGEF1-208ENST00000522878 FHOD3Q2V2M9 1422 aa9.87□□□□□ -0.83
ARFGEF1-208ENST00000522878 RNF17Q9BXT8 1623 aaKnown RBP9.86□□□□□ -0.83
ARFGEF1-208ENST00000522878 SLC34A2O95436 690 aa9.86□□□□□ -0.83
ARFGEF1-208ENST00000522878 STRCP1A6NGW2 1772 aa9.86□□□□□ -0.83
ARFGEF1-208ENST00000522878 PLA2R1Q13018 1463 aa9.85□□□□□ -0.83
ARFGEF1-208ENST00000522878 POLR1AO95602 1720 aaPredicted RBP9.85□□□□□ -0.83
ARFGEF1-208ENST00000522878 MKRN4PQ13434 485 aaPredicted RBP9.85□□□□□ -0.83
ARFGEF1-208ENST00000522878 CHADLQ6NUI6 762 aa9.85□□□□□ -0.83
ARFGEF1-208ENST00000522878 SSUH2Q9Y2M2 353 aa9.85□□□□□ -0.83
ARFGEF1-208ENST00000522878 BIVM-ERCC5R4GMW8 1640 aa9.85□□□□□ -0.83
ARFGEF1-208ENST00000522878 ZNF692Q9BU19 519 aaPredicted RBP9.84□□□□□ -0.83
ARFGEF1-208ENST00000522878 SHANK2Q9UPX8 1470 aa9.83□□□□□ -0.84
ARFGEF1-208ENST00000522878 IQGAP2Q13576 1575 aa9.83□□□□□ -0.84
ARFGEF1-208ENST00000522878 TRAPPC8Q9Y2L5 1435 aa9.82□□□□□ -0.84
ARFGEF1-208ENST00000522878 RAPGEF2Q9Y4G8 1499 aa9.82□□□□□ -0.84
ARFGEF1-208ENST00000522878 VWDEQ8N2E2 1590 aa9.82□□□□□ -0.84
ARFGEF1-208ENST00000522878 HECW1Q76N89 1606 aa9.82□□□□□ -0.84
ARFGEF1-208ENST00000522878 DENND4BO75064 1496 aaPredicted RBP9.81□□□□□ -0.84
ARFGEF1-208ENST00000522878 CDK12Q9NYV4 1490 aaPredicted RBP9.81□□□□□ -0.84
ARFGEF1-208ENST00000522878 TRIM52Q96A61 297 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms