RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 CDK11AQ9UQ88 783 aaPredicted RBP15.32■□□□□ 0.04
RAB11FIP1-204ENST00000522774 JPH4Q96JJ6 628 aa15.32■□□□□ 0.04
RAB11FIP1-204ENST00000522774 TROQ12816 1431 aaPredicted RBP15.31■□□□□ 0.04
RAB11FIP1-204ENST00000522774 MPHOSPH9Q99550 1183 aa15.3■□□□□ 0.04
RAB11FIP1-204ENST00000522774 ROCK1Q13464 1354 aa15.29■□□□□ 0.04
RAB11FIP1-204ENST00000522774 CARMIL2Q6F5E8 1435 aa15.29■□□□□ 0.04
RAB11FIP1-204ENST00000522774 KIF14Q15058 1648 aa15.29■□□□□ 0.04
RAB11FIP1-204ENST00000522774 FOXD1Q16676 465 aa15.28■□□□□ 0.04
RAB11FIP1-204ENST00000522774 CAMSAP2Q08AD1 1489 aa15.26■□□□□ 0.03
RAB11FIP1-204ENST00000522774 PELP1Q8IZL8 1130 aaKnown RBP15.26■□□□□ 0.03
RAB11FIP1-204ENST00000522774 GPATCH8Q9UKJ3 1502 aaKnown RBP15.26■□□□□ 0.03
RAB11FIP1-204ENST00000522774 ADCY10Q96PN6 1610 aa15.25■□□□□ 0.03
RAB11FIP1-204ENST00000522774 CFDP1Q9UEE9 299 aaPredicted RBP15.25■□□□□ 0.03
RAB11FIP1-204ENST00000522774 ITSN2Q9NZM3 1697 aa15.24■□□□□ 0.03
RAB11FIP1-204ENST00000522774 ABCA8O94911 1581 aa15.23■□□□□ 0.03
RAB11FIP1-204ENST00000522774 ZNF777Q9ULD5 760 aaPredicted RBP15.22■□□□□ 0.03
RAB11FIP1-204ENST00000522774 ANKRD30BQ9BXX2 1392 aa15.21■□□□□ 0.02
RAB11FIP1-204ENST00000522774 L3MBTL2Q969R5 705 aa15.2■□□□□ 0.02
RAB11FIP1-204ENST00000522774 ATP10BO94823 1461 aa15.19■□□□□ 0.02
RAB11FIP1-204ENST00000522774 NCOA1Q15788 1441 aa15.19■□□□□ 0.02
RAB11FIP1-204ENST00000522774 ADGBQ8N7X0 1667 aa15.18■□□□□ 0.02
RAB11FIP1-204ENST00000522774 CROCC2H7BZ55 1655 aa15.18■□□□□ 0.02
RAB11FIP1-204ENST00000522774 ANP32CO43423 234 aa15.18■□□□□ 0.02
RAB11FIP1-204ENST00000522774 HSPA5P11021 654 aaKnown RBP15.18■□□□□ 0.02
RAB11FIP1-204ENST00000522774 SLC4A1APQ9BWU0 796 aaKnown RBP15.18■□□□□ 0.02
RAB11FIP1-204ENST00000522774 RPRD2Q5VT52 1461 aaKnown RBP15.17■□□□□ 0.02
RAB11FIP1-204ENST00000522774 CDC42BPAQ5VT25 1732 aa15.17■□□□□ 0.02
RAB11FIP1-204ENST00000522774 PZPP20742 1482 aa15.17■□□□□ 0.02
RAB11FIP1-204ENST00000522774 PLEKHD1A6NEE1 506 aa15.17■□□□□ 0.02
RAB11FIP1-204ENST00000522774 ABCC10Q5T3U5 1492 aa15.16■□□□□ 0.02
RAB11FIP1-204ENST00000522774 ADGRL2O95490 1459 aa15.16■□□□□ 0.02
RAB11FIP1-204ENST00000522774 CCER2I3L3R5 266 aa15.15■□□□□ 0.02
RAB11FIP1-204ENST00000522774 TEX14Q8IWB6 1497 aa15.15■□□□□ 0.02
RAB11FIP1-204ENST00000522774 SUPT16HQ9Y5B9 1047 aaKnown RBP15.14■□□□□ 0.01
RAB11FIP1-204ENST00000522774 WASHC2AQ641Q2 1341 aa15.14■□□□□ 0.01
RAB11FIP1-204ENST00000522774 NBPF8Q3BBV2 869 aa15.13■□□□□ 0.01
RAB11FIP1-204ENST00000522774 EIF4G2P78344 907 aaKnown RBP eCLIP15.12■□□□□ 0.01
RAB11FIP1-204ENST00000522774 CHD1O14646 1710 aa15.12■□□□□ 0.01
RAB11FIP1-204ENST00000522774 PTPRGP23470 1445 aa15.12■□□□□ 0.01
RAB11FIP1-204ENST00000522774 ANKRD30AQ9BXX3 1397 aa15.11■□□□□ 0.01
RAB11FIP1-204ENST00000522774 ANKRD50Q9ULJ7 1429 aa15.09■□□□□ 0.01
RAB11FIP1-204ENST00000522774 C9orf84Q5VXU9 1444 aa15.08■□□□□ 0
RAB11FIP1-204ENST00000522774 KIAA1107Q9UPP5 1409 aa15.07■□□□□ 0
RAB11FIP1-204ENST00000522774 C11orf95C9JLR9 678 aaPredicted RBP15.07■□□□□ 0
RAB11FIP1-204ENST00000522774 SHANK2Q9UPX8 1470 aa15.07■□□□□ 0
RAB11FIP1-204ENST00000522774 PKD2Q13563 968 aa15.06■□□□□ 0
RAB11FIP1-204ENST00000522774 HNRNPMP52272 730 aaKnown RBP eCLIP15.05■□□□□ 0
RAB11FIP1-204ENST00000522774 SHROOM2Q13796 1616 aa15.03■□□□□ -0
RAB11FIP1-204ENST00000522774 CCDC7Q96M83 1385 aa15.03■□□□□ -0
RAB11FIP1-204ENST00000522774 CDC42BPBQ9Y5S2 1711 aa15.03■□□□□ -0
RAB11FIP1-204ENST00000522774 MBD5Q9P267 1494 aa15.03■□□□□ -0
RAB11FIP1-204ENST00000522774 SPATA31E1Q6ZUB1 1445 aa15.03■□□□□ -0
RAB11FIP1-204ENST00000522774 CNTLNQ9NXG0 1405 aa15.03■□□□□ -0
RAB11FIP1-204ENST00000522774 ERCC6L2Q5T890 1561 aa15.02■□□□□ -0
RAB11FIP1-204ENST00000522774 SAMD9LQ8IVG5 1584 aa15.02■□□□□ -0
RAB11FIP1-204ENST00000522774 TSPY4P0CV99 314 aa15.02□□□□□ -0.01
RAB11FIP1-204ENST00000522774 TSPY10P0CW01 314 aa15.02□□□□□ -0.01
RAB11FIP1-204ENST00000522774 NUP155O75694 1391 aa15.02□□□□□ -0.01
RAB11FIP1-204ENST00000522774 ARHGEF5Q12774 1597 aa15.02□□□□□ -0.01
RAB11FIP1-204ENST00000522774 PREX2Q70Z35 1606 aa15.01□□□□□ -0.01
RAB11FIP1-204ENST00000522774 KIF15Q9NS87 1388 aa15.01□□□□□ -0.01
RAB11FIP1-204ENST00000522774 TTC37Q6PGP7 1564 aa14.98□□□□□ -0.01
RAB11FIP1-204ENST00000522774 KDM5DQ9BY66 1539 aa14.98□□□□□ -0.01
RAB11FIP1-204ENST00000522774 CCDC141Q6ZP82 1450 aa14.98□□□□□ -0.01
RAB11FIP1-204ENST00000522774 KIF7Q2M1P5 1343 aa14.97□□□□□ -0.01
RAB11FIP1-204ENST00000522774 ZNF326Q5BKZ1 582 aaKnown RBP14.97□□□□□ -0.01
RAB11FIP1-204ENST00000522774 POLR1AO95602 1720 aaPredicted RBP14.96□□□□□ -0.01
RAB11FIP1-204ENST00000522774 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.96□□□□□ -0.01
RAB11FIP1-204ENST00000522774 ABCC2Q92887 1545 aa14.95□□□□□ -0.02
RAB11FIP1-204ENST00000522774 SYCP2Q9BX26 1530 aa14.95□□□□□ -0.02
RAB11FIP1-204ENST00000522774 CCDC184Q52MB2 194 aa14.95□□□□□ -0.02
RAB11FIP1-204ENST00000522774 FKBP8Q14318 412 aa14.94□□□□□ -0.02
RAB11FIP1-204ENST00000522774 ARHGAP5Q13017 1502 aa14.94□□□□□ -0.02
RAB11FIP1-204ENST00000522774 BCANQ96GW7 911 aa14.93□□□□□ -0.02
RAB11FIP1-204ENST00000522774 PRKRIP1Q9H875 184 aaPredicted RBP14.93□□□□□ -0.02
RAB11FIP1-204ENST00000522774 USP47Q96K76 1375 aa14.92□□□□□ -0.02
RAB11FIP1-204ENST00000522774 BCORL1Q5H9F3 1711 aa14.92□□□□□ -0.02
RAB11FIP1-204ENST00000522774 HNRNPUQ00839 825 aaKnown RBP eCLIP14.92□□□□□ -0.02
RAB11FIP1-204ENST00000522774 UHRF1BP1Q6BDS2 1440 aa14.91□□□□□ -0.02
RAB11FIP1-204ENST00000522774 KDM5CP41229 1560 aa14.9□□□□□ -0.02
RAB11FIP1-204ENST00000522774 FAM135AQ9P2D6 1515 aa14.9□□□□□ -0.02
RAB11FIP1-204ENST00000522774 RSPH4AQ5TD94 716 aa14.9□□□□□ -0.02
RAB11FIP1-204ENST00000522774 MYO5CQ9NQX4 1742 aa14.9□□□□□ -0.02
RAB11FIP1-204ENST00000522774 ARHGEF12Q9NZN5 1544 aa14.89□□□□□ -0.03
RAB11FIP1-204ENST00000522774 MAST1Q9Y2H9 1570 aa14.89□□□□□ -0.03
RAB11FIP1-204ENST00000522774 CLASP1Q7Z460 1538 aa14.89□□□□□ -0.03
RAB11FIP1-204ENST00000522774 RALGAPBQ86X10 1494 aa14.88□□□□□ -0.03
RAB11FIP1-204ENST00000522774 KDM2AQ9Y2K7 1162 aa14.87□□□□□ -0.03
RAB11FIP1-204ENST00000522774 ZCCHC11Q5TAX3 1644 aaKnown RBP14.87□□□□□ -0.03
RAB11FIP1-204ENST00000522774 NEFLP07196 543 aa14.85□□□□□ -0.03
RAB11FIP1-204ENST00000522774 POLR3GLQ9BT43 218 aa14.85□□□□□ -0.03
RAB11FIP1-204ENST00000522774 UNC13BO14795 1591 aa14.85□□□□□ -0.03
RAB11FIP1-204ENST00000522774 DCAF11Q8TEB1 546 aa14.85□□□□□ -0.03
RAB11FIP1-204ENST00000522774 DHX29Q7Z478 1369 aaKnown RBP14.84□□□□□ -0.03
RAB11FIP1-204ENST00000522774 CARD11Q9BXL7 1154 aa14.84□□□□□ -0.03
RAB11FIP1-204ENST00000522774 MRS2Q9HD23 443 aa14.84□□□□□ -0.03
RAB11FIP1-204ENST00000522774 PLXNC1O60486 1568 aa14.84□□□□□ -0.03
RAB11FIP1-204ENST00000522774 PLEKHH2Q8IVE3 1493 aa14.84□□□□□ -0.03
RAB11FIP1-204ENST00000522774 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.84□□□□□ -0.031e-6■■□□□ 14.4
RAB11FIP1-204ENST00000522774 FAM9BQ8IZU0 186 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms