RNA–Protein interactions for RNA: ENST00000521678.1

IGHV3-60-201, Transcript of immunoglobulin heavy variable 3-60 (pseudogene), humanhuman

BASIC

Gene IGHV3-60, Length 354 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-60-201ENST00000521678 ATP10AO60312 1499 aa19.18■□□□□ 0.66
IGHV3-60-201ENST00000521678 SIGLEC1Q9BZZ2 1709 aa19.18■□□□□ 0.66
IGHV3-60-201ENST00000521678 CDK11AQ9UQ88 783 aaPredicted RBP19.17■□□□□ 0.66
IGHV3-60-201ENST00000521678 PLPPR3Q6T4P5 718 aa19.16■□□□□ 0.66
IGHV3-60-201ENST00000521678 FMN1Q68DA7 1419 aa19.16■□□□□ 0.66
IGHV3-60-201ENST00000521678 CERKQ8TCT0 537 aa19.15■□□□□ 0.66
IGHV3-60-201ENST00000521678 UBTFP17480 764 aaKnown RBP19.14■□□□□ 0.65
IGHV3-60-201ENST00000521678 ATP1B4Q9UN42 357 aaPredicted RBP19.13■□□□□ 0.65
IGHV3-60-201ENST00000521678 ARHGEF12Q9NZN5 1544 aa19.13■□□□□ 0.65
IGHV3-60-201ENST00000521678 ARHGAP35Q9NRY4 1499 aa19.12■□□□□ 0.65
IGHV3-60-201ENST00000521678 C9orf84Q5VXU9 1444 aa19.12■□□□□ 0.65
IGHV3-60-201ENST00000521678 AFAP1Q8N556 730 aa19.12■□□□□ 0.65
IGHV3-60-201ENST00000521678 CEBPAP49715 358 aaPredicted RBP19.1■□□□□ 0.65
IGHV3-60-201ENST00000521678 TROQ12816 1431 aaPredicted RBP19.09■□□□□ 0.65
IGHV3-60-201ENST00000521678 ZNF518AQ6AHZ1 1483 aa19.07■□□□□ 0.64
IGHV3-60-201ENST00000521678 EHMT2Q96KQ7 1210 aa19.05■□□□□ 0.64
IGHV3-60-201ENST00000521678 FER1L4A9Z1Z3 1794 aa19.04■□□□□ 0.64
IGHV3-60-201ENST00000521678 DMRT2Q9Y5R5 561 aa19.04■□□□□ 0.64
IGHV3-60-201ENST00000521678 KIF14Q15058 1648 aa19.03■□□□□ 0.64
IGHV3-60-201ENST00000521678 KDM5CP41229 1560 aa19.03■□□□□ 0.64
IGHV3-60-201ENST00000521678 MYO5CQ9NQX4 1742 aa19.02■□□□□ 0.63
IGHV3-60-201ENST00000521678 MLH3Q9UHC1 1453 aa19.02■□□□□ 0.63
IGHV3-60-201ENST00000521678 CLIP1P30622 1438 aa19.01■□□□□ 0.63
IGHV3-60-201ENST00000521678 CHIC1Q5VXU3 224 aa19.01■□□□□ 0.63
IGHV3-60-201ENST00000521678 ARHGAP5Q13017 1502 aa19■□□□□ 0.63
IGHV3-60-201ENST00000521678 REREQ9P2R6 1566 aa18.99■□□□□ 0.63
IGHV3-60-201ENST00000521678 SETD1BQ9UPS6 1966 aaKnown RBP18.97■□□□□ 0.63
IGHV3-60-201ENST00000521678 PREX1Q8TCU6 1659 aa18.97■□□□□ 0.63
IGHV3-60-201ENST00000521678 UHRF1BP1Q6BDS2 1440 aa18.97■□□□□ 0.63
IGHV3-60-201ENST00000521678 TRAPPC8Q9Y2L5 1435 aa18.97■□□□□ 0.63
IGHV3-60-201ENST00000521678 AGLP35573 1532 aa18.96■□□□□ 0.63
IGHV3-60-201ENST00000521678 MYT1LQ9UL68 1186 aa18.96■□□□□ 0.63
IGHV3-60-201ENST00000521678 DIP2CQ9Y2E4 1556 aa18.96■□□□□ 0.63
IGHV3-60-201ENST00000521678 CASKIN1Q8WXD9 1431 aa18.95■□□□□ 0.62
IGHV3-60-201ENST00000521678 STRCQ7RTU9 1775 aa18.93■□□□□ 0.62
IGHV3-60-201ENST00000521678 PTPRTO14522 1441 aa18.92■□□□□ 0.62
IGHV3-60-201ENST00000521678 CDC42BPBQ9Y5S2 1711 aa18.91■□□□□ 0.62
IGHV3-60-201ENST00000521678 ESF1Q9H501 851 aaKnown RBP18.9■□□□□ 0.62
IGHV3-60-201ENST00000521678 LRRIQ1Q96JM4 1722 aa18.9■□□□□ 0.62
IGHV3-60-201ENST00000521678 CCDC18Q5T9S5 1454 aa18.9■□□□□ 0.62
IGHV3-60-201ENST00000521678 ABCC1P33527 1531 aa18.9■□□□□ 0.62
IGHV3-60-201ENST00000521678 ABCA6Q8N139 1617 aa18.89■□□□□ 0.62
IGHV3-60-201ENST00000521678 CNTLNQ9NXG0 1405 aa18.87■□□□□ 0.61
IGHV3-60-201ENST00000521678 PREX2Q70Z35 1606 aa18.86■□□□□ 0.61
IGHV3-60-201ENST00000521678 C3P01024 1663 aa18.85■□□□□ 0.61
IGHV3-60-201ENST00000521678 KIDINS220Q9ULH0 1771 aa18.84■□□□□ 0.61
IGHV3-60-201ENST00000521678 GPATCH8Q9UKJ3 1502 aaKnown RBP18.83■□□□□ 0.6
IGHV3-60-201ENST00000521678 NPATQ14207 1427 aa18.83■□□□□ 0.6
IGHV3-60-201ENST00000521678 ZMYM3Q14202 1370 aa18.82■□□□□ 0.6
IGHV3-60-201ENST00000521678 HNRNPMP52272 730 aaKnown RBP eCLIP18.82■□□□□ 0.6
IGHV3-60-201ENST00000521678 NCOA1Q15788 1441 aa18.82■□□□□ 0.6
IGHV3-60-201ENST00000521678 LTBP4Q8N2S1 1624 aa18.82■□□□□ 0.6
IGHV3-60-201ENST00000521678 SPAG9O60271 1321 aaKnown RBP18.81■□□□□ 0.6
IGHV3-60-201ENST00000521678 ILDR2Q71H61 639 aa18.81■□□□□ 0.6
IGHV3-60-201ENST00000521678 ZNF777Q9ULD5 760 aaPredicted RBP18.81■□□□□ 0.6
IGHV3-60-201ENST00000521678 ITSN2Q9NZM3 1697 aa18.81■□□□□ 0.6
IGHV3-60-201ENST00000521678 KIAA1107Q9UPP5 1409 aa18.81■□□□□ 0.6
IGHV3-60-201ENST00000521678 SAMD9LQ8IVG5 1584 aa18.81■□□□□ 0.6
IGHV3-60-201ENST00000521678 FYCO1Q9BQS8 1478 aa18.8■□□□□ 0.6
IGHV3-60-201ENST00000521678 DISP3Q9P2K9 1392 aa18.79■□□□□ 0.6
IGHV3-60-201ENST00000521678 CDC42BPAQ5VT25 1732 aa18.78■□□□□ 0.6
IGHV3-60-201ENST00000521678 IQSEC2Q5JU85 1478 aa18.77■□□□□ 0.59
IGHV3-60-201ENST00000521678 CFDP1Q9UEE9 299 aaPredicted RBP18.76■□□□□ 0.59
IGHV3-60-201ENST00000521678 PPP6R1Q9UPN7 881 aa18.76■□□□□ 0.59
IGHV3-60-201ENST00000521678 SOCS7O14512 581 aa18.74■□□□□ 0.59
IGHV3-60-201ENST00000521678 NCKAP5LQ9HCH0 1330 aa18.74■□□□□ 0.59
IGHV3-60-201ENST00000521678 PLEKHH2Q8IVE3 1493 aa18.73■□□□□ 0.59
IGHV3-60-201ENST00000521678 SYCP2Q9BX26 1530 aa18.73■□□□□ 0.59
IGHV3-60-201ENST00000521678 PKD2Q13563 968 aa18.72■□□□□ 0.59
IGHV3-60-201ENST00000521678 MROH2AA6NES4 1674 aa18.72■□□□□ 0.59
IGHV3-60-201ENST00000521678 A2MP01023 1474 aa18.71■□□□□ 0.59
IGHV3-60-201ENST00000521678 CAMSAP1Q5T5Y3 1602 aa18.71■□□□□ 0.59
IGHV3-60-201ENST00000521678 PTPRKQ15262 1439 aa18.71■□□□□ 0.59
IGHV3-60-201ENST00000521678 CCNB3Q8WWL7 1395 aa18.7■□□□□ 0.58
IGHV3-60-201ENST00000521678 ATP7AQ04656 1500 aa18.69■□□□□ 0.58
IGHV3-60-201ENST00000521678 PLXNC1O60486 1568 aa18.69■□□□□ 0.58
IGHV3-60-201ENST00000521678 GGT6Q6P531 493 aa18.69■□□□□ 0.58
IGHV3-60-201ENST00000521678 PLA2R1Q13018 1463 aa18.68■□□□□ 0.58
IGHV3-60-201ENST00000521678 ZNF644Q9H582 1327 aaPredicted RBP18.68■□□□□ 0.58
IGHV3-60-201ENST00000521678 ZNF335Q9H4Z2 1342 aaPredicted RBP18.67■□□□□ 0.58
IGHV3-60-201ENST00000521678 TCOF1Q13428 1488 aaKnown RBP18.66■□□□□ 0.58
IGHV3-60-201ENST00000521678 MBD5Q9P267 1494 aa18.66■□□□□ 0.58
IGHV3-60-201ENST00000521678 INO80Q9ULG1 1556 aaPredicted RBP18.66■□□□□ 0.58
IGHV3-60-201ENST00000521678 MTUS2Q5JR59 1369 aa18.65■□□□□ 0.58
IGHV3-60-201ENST00000521678 SUPT6HQ7KZ85 1726 aaKnown RBP18.64■□□□□ 0.57
IGHV3-60-201ENST00000521678 RTEL1-TNFRSF6BF6WH68 1400 aa18.64■□□□□ 0.57
IGHV3-60-201ENST00000521678 DHX29Q7Z478 1369 aaKnown RBP18.63■□□□□ 0.57
IGHV3-60-201ENST00000521678 UBAP1LF5GYI3 381 aa18.62■□□□□ 0.57
IGHV3-60-201ENST00000521678 CLTCQ00610 1675 aaKnown RBP18.61■□□□□ 0.57
IGHV3-60-201ENST00000521678 CEP170BQ9Y4F5 1589 aaPredicted RBP18.6■□□□□ 0.57
IGHV3-60-201ENST00000521678 ZNF142P52746 1687 aaPredicted RBP18.59■□□□□ 0.57
IGHV3-60-201ENST00000521678 MYO3AQ8NEV4 1616 aa18.58■□□□□ 0.56
IGHV3-60-201ENST00000521678 SPATA31D1Q6ZQQ2 1576 aa18.58■□□□□ 0.56
IGHV3-60-201ENST00000521678 A2ML1A8K2U0 1454 aa18.58■□□□□ 0.56
IGHV3-60-201ENST00000521678 CEP162Q5TB80 1403 aa18.57■□□□□ 0.56
IGHV3-60-201ENST00000521678 RSPH4AQ5TD94 716 aa18.57■□□□□ 0.56
IGHV3-60-201ENST00000521678 FBXO31Q5XUX0 539 aaPredicted RBP18.57■□□□□ 0.56
IGHV3-60-201ENST00000521678 TIAM1Q13009 1591 aa18.55■□□□□ 0.56
IGHV3-60-201ENST00000521678 ADGBQ8N7X0 1667 aa18.55■□□□□ 0.56
IGHV3-60-201ENST00000521678 KIF3BO15066 747 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms