RNA–Protein interactions for RNA: ENST00000521327.1

SPARC-203, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 864 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-203ENST00000521327 RIMS1Q86UR5 1692 aaKnown RBP22.52■■□□□ 1.2
SPARC-203ENST00000521327 ZMYM4Q5VZL5 1548 aa22.52■■□□□ 1.19
SPARC-203ENST00000521327 EFCAB2Q5VUJ9 269 aa22.51■■□□□ 1.19
SPARC-203ENST00000521327 CDK11AQ9UQ88 783 aaPredicted RBP22.49■■□□□ 1.19
SPARC-203ENST00000521327 HECW1Q76N89 1606 aa22.47■■□□□ 1.19
SPARC-203ENST00000521327 FMN1Q68DA7 1419 aa22.45■■□□□ 1.18
SPARC-203ENST00000521327 ATP10AO60312 1499 aa22.44■■□□□ 1.18
SPARC-203ENST00000521327 SIGLEC1Q9BZZ2 1709 aa22.43■■□□□ 1.18
SPARC-203ENST00000521327 CEBPAP49715 358 aaPredicted RBP22.42■■□□□ 1.18
SPARC-203ENST00000521327 AFAP1Q8N556 730 aa22.42■■□□□ 1.18
SPARC-203ENST00000521327 CERKQ8TCT0 537 aa22.4■■□□□ 1.18
SPARC-203ENST00000521327 MYT1LQ9UL68 1186 aa22.4■■□□□ 1.18
SPARC-203ENST00000521327 ARHGAP35Q9NRY4 1499 aa22.4■■□□□ 1.18
SPARC-203ENST00000521327 C9orf84Q5VXU9 1444 aa22.4■■□□□ 1.18
SPARC-203ENST00000521327 TROQ12816 1431 aaPredicted RBP22.36■■□□□ 1.17
SPARC-203ENST00000521327 ARHGEF12Q9NZN5 1544 aa22.35■■□□□ 1.17
SPARC-203ENST00000521327 ZNF518AQ6AHZ1 1483 aa22.33■■□□□ 1.16
SPARC-203ENST00000521327 CLIP1P30622 1438 aa22.32■■□□□ 1.16
SPARC-203ENST00000521327 ARHGAP5Q13017 1502 aa22.32■■□□□ 1.16
SPARC-203ENST00000521327 CHIC1Q5VXU3 224 aa22.32■■□□□ 1.16
SPARC-203ENST00000521327 KIF14Q15058 1648 aa22.31■■□□□ 1.16
SPARC-203ENST00000521327 FER1L4A9Z1Z3 1794 aa22.3■■□□□ 1.16
SPARC-203ENST00000521327 MYO5CQ9NQX4 1742 aa22.28■■□□□ 1.16
SPARC-203ENST00000521327 DMRT2Q9Y5R5 561 aa22.27■■□□□ 1.16
SPARC-203ENST00000521327 ESF1Q9H501 851 aaKnown RBP22.25■■□□□ 1.15
SPARC-203ENST00000521327 KDM5CP41229 1560 aa22.24■■□□□ 1.15
SPARC-203ENST00000521327 UHRF1BP1Q6BDS2 1440 aa22.23■■□□□ 1.15
SPARC-203ENST00000521327 TRAPPC8Q9Y2L5 1435 aa22.23■■□□□ 1.15
SPARC-203ENST00000521327 MLH3Q9UHC1 1453 aa22.22■■□□□ 1.15
SPARC-203ENST00000521327 DIP2CQ9Y2E4 1556 aa22.19■■□□□ 1.14
SPARC-203ENST00000521327 PREX1Q8TCU6 1659 aa22.18■■□□□ 1.14
SPARC-203ENST00000521327 CASKIN1Q8WXD9 1431 aa22.18■■□□□ 1.14
SPARC-203ENST00000521327 ZNF777Q9ULD5 760 aaPredicted RBP22.17■■□□□ 1.14
SPARC-203ENST00000521327 REREQ9P2R6 1566 aa22.14■■□□□ 1.13
SPARC-203ENST00000521327 CCDC18Q5T9S5 1454 aa22.14■■□□□ 1.13
SPARC-203ENST00000521327 ABCA6Q8N139 1617 aa22.13■■□□□ 1.13
SPARC-203ENST00000521327 ABCC1P33527 1531 aa22.12■■□□□ 1.13
SPARC-203ENST00000521327 AGLP35573 1532 aa22.12■■□□□ 1.13
SPARC-203ENST00000521327 CDC42BPBQ9Y5S2 1711 aa22.12■■□□□ 1.13
SPARC-203ENST00000521327 LRRIQ1Q96JM4 1722 aa22.11■■□□□ 1.13
SPARC-203ENST00000521327 HNRNPMP52272 730 aaKnown RBP eCLIP22.1■■□□□ 1.13
SPARC-203ENST00000521327 STRCQ7RTU9 1775 aa22.1■■□□□ 1.13
SPARC-203ENST00000521327 PTPRTO14522 1441 aa22.09■■□□□ 1.13
SPARC-203ENST00000521327 PREX2Q70Z35 1606 aa22.08■■□□□ 1.13
SPARC-203ENST00000521327 SETD1BQ9UPS6 1966 aaKnown RBP22.08■■□□□ 1.12
SPARC-203ENST00000521327 SPAG9O60271 1321 aaKnown RBP22.07■■□□□ 1.12
SPARC-203ENST00000521327 CNTLNQ9NXG0 1405 aa22.07■■□□□ 1.12
SPARC-203ENST00000521327 DISP3Q9P2K9 1392 aa22.06■■□□□ 1.12
SPARC-203ENST00000521327 C3P01024 1663 aa22.04■■□□□ 1.12
SPARC-203ENST00000521327 ZMYM3Q14202 1370 aa22.04■■□□□ 1.12
SPARC-203ENST00000521327 CFDP1Q9UEE9 299 aaPredicted RBP22.04■■□□□ 1.12
SPARC-203ENST00000521327 GPATCH8Q9UKJ3 1502 aaKnown RBP22.03■■□□□ 1.12
SPARC-203ENST00000521327 ITSN2Q9NZM3 1697 aa22.03■■□□□ 1.12
SPARC-203ENST00000521327 FYCO1Q9BQS8 1478 aa22.03■■□□□ 1.12
SPARC-203ENST00000521327 KIDINS220Q9ULH0 1771 aa22.02■■□□□ 1.12
SPARC-203ENST00000521327 SAMD9LQ8IVG5 1584 aa22.01■■□□□ 1.11
SPARC-203ENST00000521327 NCOA1Q15788 1441 aa22.01■■□□□ 1.11
SPARC-203ENST00000521327 ILDR2Q71H61 639 aa22.01■■□□□ 1.11
SPARC-203ENST00000521327 NPATQ14207 1427 aa21.98■■□□□ 1.11
SPARC-203ENST00000521327 SYCP2Q9BX26 1530 aa21.98■■□□□ 1.11
SPARC-203ENST00000521327 GGT6Q6P531 493 aa21.98■■□□□ 1.11
SPARC-203ENST00000521327 NCKAP5LQ9HCH0 1330 aa21.98■■□□□ 1.11
SPARC-203ENST00000521327 CDC42BPAQ5VT25 1732 aa21.97■■□□□ 1.11
SPARC-203ENST00000521327 CCNB3Q8WWL7 1395 aa21.97■■□□□ 1.11
SPARC-203ENST00000521327 KIAA1107Q9UPP5 1409 aa21.97■■□□□ 1.11
SPARC-203ENST00000521327 LTBP4Q8N2S1 1624 aa21.95■■□□□ 1.1
SPARC-203ENST00000521327 PLEKHH2Q8IVE3 1493 aa21.93■■□□□ 1.1
SPARC-203ENST00000521327 CAMSAP1Q5T5Y3 1602 aa21.92■■□□□ 1.1
SPARC-203ENST00000521327 A2MP01023 1474 aa21.92■■□□□ 1.1
SPARC-203ENST00000521327 MTUS2Q5JR59 1369 aa21.92■■□□□ 1.1
SPARC-203ENST00000521327 ZNF644Q9H582 1327 aaPredicted RBP21.92■■□□□ 1.1
SPARC-203ENST00000521327 ATP7AQ04656 1500 aa21.91■■□□□ 1.1
SPARC-203ENST00000521327 ZNF335Q9H4Z2 1342 aaPredicted RBP21.9■■□□□ 1.1
SPARC-203ENST00000521327 SOCS7O14512 581 aa21.9■■□□□ 1.1
SPARC-203ENST00000521327 PKD2Q13563 968 aa21.89■■□□□ 1.09
SPARC-203ENST00000521327 PPP6R1Q9UPN7 881 aa21.89■■□□□ 1.09
SPARC-203ENST00000521327 PTPRKQ15262 1439 aa21.89■■□□□ 1.09
SPARC-203ENST00000521327 SUPT6HQ7KZ85 1726 aaKnown RBP21.87■■□□□ 1.09
SPARC-203ENST00000521327 IQSEC2Q5JU85 1478 aa21.87■■□□□ 1.09
SPARC-203ENST00000521327 UBAP1LF5GYI3 381 aa21.86■■□□□ 1.09
SPARC-203ENST00000521327 MROH2AA6NES4 1674 aa21.85■■□□□ 1.09
SPARC-203ENST00000521327 PLXNC1O60486 1568 aa21.85■■□□□ 1.09
SPARC-203ENST00000521327 INO80Q9ULG1 1556 aaPredicted RBP21.83■■□□□ 1.09
SPARC-203ENST00000521327 PLA2R1Q13018 1463 aa21.82■■□□□ 1.08
SPARC-203ENST00000521327 CLTCQ00610 1675 aaKnown RBP21.82■■□□□ 1.08
SPARC-203ENST00000521327 MBD5Q9P267 1494 aa21.81■■□□□ 1.08
SPARC-203ENST00000521327 TCOF1Q13428 1488 aaKnown RBP21.79■■□□□ 1.08
SPARC-203ENST00000521327 DHX29Q7Z478 1369 aaKnown RBP21.79■■□□□ 1.08
SPARC-203ENST00000521327 KIF3BO15066 747 aa21.79■■□□□ 1.08
SPARC-203ENST00000521327 CEP170BQ9Y4F5 1589 aaPredicted RBP21.78■■□□□ 1.08
SPARC-203ENST00000521327 FBXO31Q5XUX0 539 aaPredicted RBP21.78■■□□□ 1.08
SPARC-203ENST00000521327 SPATA31D1Q6ZQQ2 1576 aa21.78■■□□□ 1.08
SPARC-203ENST00000521327 RTEL1-TNFRSF6BF6WH68 1400 aa21.77■■□□□ 1.08
SPARC-203ENST00000521327 MYO3AQ8NEV4 1616 aa21.77■■□□□ 1.07
SPARC-203ENST00000521327 TIAM1Q13009 1591 aa21.74■■□□□ 1.07
SPARC-203ENST00000521327 CEP162Q5TB80 1403 aa21.74■■□□□ 1.07
SPARC-203ENST00000521327 A2ML1A8K2U0 1454 aa21.74■■□□□ 1.07
SPARC-203ENST00000521327 WASHC2CQ9Y4E1 1318 aa21.73■■□□□ 1.07
SPARC-203ENST00000521327 EHBP1L1Q8N3D4 1523 aa21.72■■□□□ 1.07
SPARC-203ENST00000521327 ZNF142P52746 1687 aaPredicted RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms