RNA–Protein interactions for RNA: ENST00000521059.5

PTK2-228, Transcript of protein tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTK2, Length 4,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-228ENST00000521059 TCOF1Q13428 1488 aaKnown RBP10.1□□□□□ -0.79
PTK2-228ENST00000521059 GRIN2AQ12879 1464 aa10.1□□□□□ -0.79
PTK2-228ENST00000521059 DAPK1P53355 1430 aa10.09□□□□□ -0.79
PTK2-228ENST00000521059 HECW1Q76N89 1606 aa10.08□□□□□ -0.8
PTK2-228ENST00000521059 CHMP7Q8WUX9 453 aaPredicted RBP10.08□□□□□ -0.8
PTK2-228ENST00000521059 ANKRD30BQ9BXX2 1392 aa10.07□□□□□ -0.8
PTK2-228ENST00000521059 JPH4Q96JJ6 628 aa10.07□□□□□ -0.8
PTK2-228ENST00000521059 GCC2Q8IWJ2 1684 aa10.06□□□□□ -0.8
PTK2-228ENST00000521059 KIAA0586Q9BVV6 1533 aa10.06□□□□□ -0.8
PTK2-228ENST00000521059 ZNF326Q5BKZ1 582 aaKnown RBP10.06□□□□□ -0.8
PTK2-228ENST00000521059 PZPP20742 1482 aa10.05□□□□□ -0.8
PTK2-228ENST00000521059 IFT140Q96RY7 1462 aa10.05□□□□□ -0.8
PTK2-228ENST00000521059 SLC4A1APQ9BWU0 796 aaKnown RBP10.05□□□□□ -0.8
PTK2-228ENST00000521059 GPATCH8Q9UKJ3 1502 aaKnown RBP10.04□□□□□ -0.8
PTK2-228ENST00000521059 RAPGEF6Q8TEU7 1601 aa10.04□□□□□ -0.8
PTK2-228ENST00000521059 HNRNPMP52272 730 aaKnown RBP eCLIP10.04□□□□□ -0.81e-6■■■■□ 24
PTK2-228ENST00000521059 ERCC6Q03468 1493 aa10.04□□□□□ -0.8
PTK2-228ENST00000521059 TEX14Q8IWB6 1497 aa10.04□□□□□ -0.8
PTK2-228ENST00000521059 ANP32CO43423 234 aa10.03□□□□□ -0.8
PTK2-228ENST00000521059 CFDP1Q9UEE9 299 aaPredicted RBP10.03□□□□□ -0.8
PTK2-228ENST00000521059 ERCC6L2Q5T890 1561 aa10.02□□□□□ -0.8
PTK2-228ENST00000521059 PELP1Q8IZL8 1130 aaKnown RBP10.02□□□□□ -0.81
PTK2-228ENST00000521059 TIMELESSQ9UNS1 1208 aa10.02□□□□□ -0.81
PTK2-228ENST00000521059 CAMSAP2Q08AD1 1489 aa10.02□□□□□ -0.81
PTK2-228ENST00000521059 BCORL1Q5H9F3 1711 aa10.01□□□□□ -0.81
PTK2-228ENST00000521059 NCOA1Q15788 1441 aa10.01□□□□□ -0.81
PTK2-228ENST00000521059 HNRNPUQ00839 825 aaKnown RBP eCLIP10.01□□□□□ -0.81
PTK2-228ENST00000521059 KIF7Q2M1P5 1343 aa10.01□□□□□ -0.81
PTK2-228ENST00000521059 DNMT1P26358 1616 aaKnown RBP10.01□□□□□ -0.81
PTK2-228ENST00000521059 SPATA31E1Q6ZUB1 1445 aa10.01□□□□□ -0.81
PTK2-228ENST00000521059 PKD2Q13563 968 aa10□□□□□ -0.81
PTK2-228ENST00000521059 FAM9BQ8IZU0 186 aa10□□□□□ -0.81
PTK2-228ENST00000521059 MIA2Q96PC5 1412 aa10□□□□□ -0.81
PTK2-228ENST00000521059 ATP10BO94823 1461 aa10□□□□□ -0.81
PTK2-228ENST00000521059 POLR3GLQ9BT43 218 aa10□□□□□ -0.81
PTK2-228ENST00000521059 AKNAQ7Z591 1439 aa9.99□□□□□ -0.81
PTK2-228ENST00000521059 RPRD2Q5VT52 1461 aaKnown RBP9.99□□□□□ -0.81
PTK2-228ENST00000521059 KDM2AQ9Y2K7 1162 aa9.99□□□□□ -0.81
PTK2-228ENST00000521059 CCDC7Q96M83 1385 aa9.97□□□□□ -0.81
PTK2-228ENST00000521059 EIF4G2P78344 907 aaKnown RBP eCLIP9.97□□□□□ -0.811e-6■■■■□ 21.9
PTK2-228ENST00000521059 PRKRIP1Q9H875 184 aaPredicted RBP9.97□□□□□ -0.81
PTK2-228ENST00000521059 TROQ12816 1431 aaPredicted RBP9.97□□□□□ -0.81
PTK2-228ENST00000521059 SYNJ2O15056 1496 aa9.97□□□□□ -0.81
PTK2-228ENST00000521059 CDC42BPAQ5VT25 1732 aa9.96□□□□□ -0.81
PTK2-228ENST00000521059 CCER2I3L3R5 266 aa9.96□□□□□ -0.81
PTK2-228ENST00000521059 NUP160Q12769 1436 aa9.95□□□□□ -0.82
PTK2-228ENST00000521059 ABCC10Q5T3U5 1492 aa9.94□□□□□ -0.82
PTK2-228ENST00000521059 NBPF1Q3BBV0 1214 aa9.93□□□□□ -0.82
PTK2-228ENST00000521059 ROCK1Q13464 1354 aa9.93□□□□□ -0.82
PTK2-228ENST00000521059 ABCA8O94911 1581 aa9.93□□□□□ -0.82
PTK2-228ENST00000521059 DHX29Q7Z478 1369 aaKnown RBP9.93□□□□□ -0.82
PTK2-228ENST00000521059 CNTLNQ9NXG0 1405 aa9.92□□□□□ -0.82
PTK2-228ENST00000521059 RGL3Q3MIN7 710 aa9.92□□□□□ -0.82
PTK2-228ENST00000521059 MAGI1Q96QZ7 1491 aaPredicted RBP9.92□□□□□ -0.82
PTK2-228ENST00000521059 NUP155O75694 1391 aa9.92□□□□□ -0.82
PTK2-228ENST00000521059 MBD5Q9P267 1494 aa9.91□□□□□ -0.82
PTK2-228ENST00000521059 ANKRD50Q9ULJ7 1429 aa9.91□□□□□ -0.82
PTK2-228ENST00000521059 MSH5O43196 834 aa9.9□□□□□ -0.82
PTK2-228ENST00000521059 ST20-MTHFSA0A0A6YYL1 179 aa9.9□□□□□ -0.82
PTK2-228ENST00000521059 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.9□□□□□ -0.823e-7■■■■□ 25.2
PTK2-228ENST00000521059 MRS2Q9HD23 443 aa9.9□□□□□ -0.82
PTK2-228ENST00000521059 CDC42BPBQ9Y5S2 1711 aa9.89□□□□□ -0.83
PTK2-228ENST00000521059 DCAF11Q8TEB1 546 aa9.89□□□□□ -0.83
PTK2-228ENST00000521059 CROCC2H7BZ55 1655 aa9.89□□□□□ -0.83
PTK2-228ENST00000521059 PLEKHD1A6NEE1 506 aa9.89□□□□□ -0.83
PTK2-228ENST00000521059 ARHGEF12Q9NZN5 1544 aa9.89□□□□□ -0.83
PTK2-228ENST00000521059 USP47Q96K76 1375 aa9.89□□□□□ -0.83
PTK2-228ENST00000521059 C9orf84Q5VXU9 1444 aa9.88□□□□□ -0.83
PTK2-228ENST00000521059 PLA2R1Q13018 1463 aa9.88□□□□□ -0.83
PTK2-228ENST00000521059 RBM19Q9Y4C8 960 aaKnown RBP9.88□□□□□ -0.83
PTK2-228ENST00000521059 KIAA1107Q9UPP5 1409 aa9.88□□□□□ -0.83
PTK2-228ENST00000521059 SAMD9LQ8IVG5 1584 aa9.88□□□□□ -0.83
PTK2-228ENST00000521059 B4GALNT3Q6L9W6 998 aa9.87□□□□□ -0.83
PTK2-228ENST00000521059 SALL2Q9Y467 1007 aaPredicted RBP9.87□□□□□ -0.83
PTK2-228ENST00000521059 TTC37Q6PGP7 1564 aa9.87□□□□□ -0.83
PTK2-228ENST00000521059 CDK11AQ9UQ88 783 aaPredicted RBP9.87□□□□□ -0.83
PTK2-228ENST00000521059 ADCY10Q96PN6 1610 aa9.86□□□□□ -0.83
PTK2-228ENST00000521059 CHD1O14646 1710 aa9.86□□□□□ -0.83
PTK2-228ENST00000521059 KIF15Q9NS87 1388 aa9.86□□□□□ -0.83
PTK2-228ENST00000521059 KDM5CP41229 1560 aa9.85□□□□□ -0.83
PTK2-228ENST00000521059 PTPRGP23470 1445 aa9.85□□□□□ -0.83
PTK2-228ENST00000521059 ADGRL2O95490 1459 aa9.85□□□□□ -0.83
PTK2-228ENST00000521059 SKAP1Q86WV1 359 aa9.84□□□□□ -0.83
PTK2-228ENST00000521059 SYCP2Q9BX26 1530 aa9.84□□□□□ -0.83
PTK2-228ENST00000521059 ADGBQ8N7X0 1667 aa9.84□□□□□ -0.83
PTK2-228ENST00000521059 CARD11Q9BXL7 1154 aa9.83□□□□□ -0.84
PTK2-228ENST00000521059 ANKRD30AQ9BXX3 1397 aa9.83□□□□□ -0.84
PTK2-228ENST00000521059 PLEKHH2Q8IVE3 1493 aa9.83□□□□□ -0.84
PTK2-228ENST00000521059 AFAP1Q8N556 730 aa9.83□□□□□ -0.84
PTK2-228ENST00000521059 CARMIL2Q6F5E8 1435 aa9.82□□□□□ -0.84
PTK2-228ENST00000521059 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.82□□□□□ -0.842e-6■■□□□ 11.5
PTK2-228ENST00000521059 ITSN2Q9NZM3 1697 aa9.81□□□□□ -0.84
PTK2-228ENST00000521059 TSPY4P0CV99 314 aa9.8□□□□□ -0.84
PTK2-228ENST00000521059 TSPY10P0CW01 314 aa9.8□□□□□ -0.84
PTK2-228ENST00000521059 SENP3Q9H4L4 574 aaPredicted RBP9.8□□□□□ -0.84
PTK2-228ENST00000521059 PNISRQ8TF01 805 aaKnown RBP9.8□□□□□ -0.84
PTK2-228ENST00000521059 FAM135AQ9P2D6 1515 aa9.79□□□□□ -0.84
PTK2-228ENST00000521059 DISP3Q9P2K9 1392 aa9.79□□□□□ -0.84
PTK2-228ENST00000521059 TRAPPC8Q9Y2L5 1435 aa9.79□□□□□ -0.84
PTK2-228ENST00000521059 CDCA7LQ96GN5 454 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms