RNA–Protein interactions for RNA: ENST00000520931.5

TNIP1-208, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIP1, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-208ENST00000520931 NBPF8Q3BBV2 869 aa24.13■■□□□ 1.45
TNIP1-208ENST00000520931 SLC4A1APQ9BWU0 796 aaKnown RBP24.12■■□□□ 1.45
TNIP1-208ENST00000520931 ABCC5O15440 1437 aa24.1■■□□□ 1.45
TNIP1-208ENST00000520931 DISP1Q96F81 1524 aa24.09■■□□□ 1.45
TNIP1-208ENST00000520931 ANKRD30BQ9BXX2 1392 aa24.08■■□□□ 1.45
TNIP1-208ENST00000520931 NUP153P49790 1475 aaKnown RBP24.08■■□□□ 1.45
TNIP1-208ENST00000520931 CNTLNQ9NXG0 1405 aa24.08■■□□□ 1.45
TNIP1-208ENST00000520931 KIAA0556O60303 1618 aa24.07■■□□□ 1.44
TNIP1-208ENST00000520931 FAM9BQ8IZU0 186 aa24.07■■□□□ 1.44
TNIP1-208ENST00000520931 RBM19Q9Y4C8 960 aaKnown RBP24.06■■□□□ 1.44
TNIP1-208ENST00000520931 CCDC7Q96M83 1385 aa24.06■■□□□ 1.44
TNIP1-208ENST00000520931 ZNF777Q9ULD5 760 aaPredicted RBP24.06■■□□□ 1.44
TNIP1-208ENST00000520931 CNGB1Q14028 1251 aaPredicted RBP24.05■■□□□ 1.44
TNIP1-208ENST00000520931 KIAA0586Q9BVV6 1533 aa24.04■■□□□ 1.44
TNIP1-208ENST00000520931 RPRD2Q5VT52 1461 aaKnown RBP24.04■■□□□ 1.44
TNIP1-208ENST00000520931 DNMT1P26358 1616 aaKnown RBP24.04■■□□□ 1.44
TNIP1-208ENST00000520931 ROCK1Q13464 1354 aa24.03■■□□□ 1.44
TNIP1-208ENST00000520931 PRG4Q92954 1404 aaPredicted RBP24.03■■□□□ 1.44
TNIP1-208ENST00000520931 NCOA1Q15788 1441 aa24.02■■□□□ 1.44
TNIP1-208ENST00000520931 PRKRIP1Q9H875 184 aaPredicted RBP24.02■■□□□ 1.44
TNIP1-208ENST00000520931 CDK11AQ9UQ88 783 aaPredicted RBP24.02■■□□□ 1.44
TNIP1-208ENST00000520931 ANP32EQ9BTT0 268 aa24.01■■□□□ 1.43
TNIP1-208ENST00000520931 MRS2Q9HD23 443 aa24.01■■□□□ 1.43
TNIP1-208ENST00000520931 IFT140Q96RY7 1462 aa24.01■■□□□ 1.43
TNIP1-208ENST00000520931 RAPGEF6Q8TEU7 1601 aa24.01■■□□□ 1.43
TNIP1-208ENST00000520931 TEX14Q8IWB6 1497 aa24■■□□□ 1.43
TNIP1-208ENST00000520931 FBLN2P98095 1184 aa24■■□□□ 1.43
TNIP1-208ENST00000520931 ZNF326Q5BKZ1 582 aaKnown RBP24■■□□□ 1.43
TNIP1-208ENST00000520931 CFDP1Q9UEE9 299 aaPredicted RBP24■■□□□ 1.43
TNIP1-208ENST00000520931 KIF7Q2M1P5 1343 aa23.97■■□□□ 1.43
TNIP1-208ENST00000520931 GRIN2AQ12879 1464 aa23.97■■□□□ 1.43
TNIP1-208ENST00000520931 POLR3GLQ9BT43 218 aa23.97■■□□□ 1.43
TNIP1-208ENST00000520931 PLB1Q6P1J6 1458 aa23.95■■□□□ 1.42
TNIP1-208ENST00000520931 CAMSAP2Q08AD1 1489 aa23.93■■□□□ 1.42
TNIP1-208ENST00000520931 CHMP7Q8WUX9 453 aaPredicted RBP23.93■■□□□ 1.42
TNIP1-208ENST00000520931 EIF4G3O43432 1585 aaKnown RBP23.92■■□□□ 1.42
TNIP1-208ENST00000520931 PZPP20742 1482 aa23.91■■□□□ 1.42
TNIP1-208ENST00000520931 TROQ12816 1431 aaPredicted RBP23.91■■□□□ 1.42
TNIP1-208ENST00000520931 SPATA31E1Q6ZUB1 1445 aa23.89■■□□□ 1.42
TNIP1-208ENST00000520931 KIF14Q15058 1648 aa23.89■■□□□ 1.41
TNIP1-208ENST00000520931 PKD2Q13563 968 aa23.88■■□□□ 1.41
TNIP1-208ENST00000520931 GPATCH8Q9UKJ3 1502 aaKnown RBP23.87■■□□□ 1.41
TNIP1-208ENST00000520931 SENP3-EIF4A1A0A087X0R7 540 aa23.85■■□□□ 1.41
TNIP1-208ENST00000520931 CEP170Q5SW79 1584 aa23.82■■□□□ 1.4
TNIP1-208ENST00000520931 KIAA1107Q9UPP5 1409 aa23.8■■□□□ 1.4
TNIP1-208ENST00000520931 USP47Q96K76 1375 aa23.8■■□□□ 1.4
TNIP1-208ENST00000520931 ZBED9Q6R2W3 1325 aa23.8■■□□□ 1.4
TNIP1-208ENST00000520931 JPH4Q96JJ6 628 aa23.8■■□□□ 1.4
TNIP1-208ENST00000520931 ITSN2Q9NZM3 1697 aa23.8■■□□□ 1.4
TNIP1-208ENST00000520931 ERCC6Q03468 1493 aa23.79■■□□□ 1.4
TNIP1-208ENST00000520931 ADGBQ8N7X0 1667 aa23.78■■□□□ 1.4
TNIP1-208ENST00000520931 ANKRD30AQ9BXX3 1397 aa23.78■■□□□ 1.4
TNIP1-208ENST00000520931 POLR1AO95602 1720 aaPredicted RBP23.77■■□□□ 1.4
TNIP1-208ENST00000520931 B4GALNT3Q6L9W6 998 aa23.77■■□□□ 1.4
TNIP1-208ENST00000520931 PPP4R2Q9NY27 417 aa23.76■■□□□ 1.39
TNIP1-208ENST00000520931 ANKRD50Q9ULJ7 1429 aa23.76■■□□□ 1.39
TNIP1-208ENST00000520931 BCORL1Q5H9F3 1711 aa23.76■■□□□ 1.39
TNIP1-208ENST00000520931 KDM2AQ9Y2K7 1162 aa23.74■■□□□ 1.39
TNIP1-208ENST00000520931 MBD5Q9P267 1494 aa23.74■■□□□ 1.39
TNIP1-208ENST00000520931 NUP155O75694 1391 aa23.74■■□□□ 1.39
TNIP1-208ENST00000520931 PLEKHD1A6NEE1 506 aa23.74■■□□□ 1.39
TNIP1-208ENST00000520931 MSH5O43196 834 aa23.74■■□□□ 1.39
TNIP1-208ENST00000520931 SYNJ2O15056 1496 aa23.74■■□□□ 1.39
TNIP1-208ENST00000520931 MAGI1Q96QZ7 1491 aaPredicted RBP23.74■■□□□ 1.39
TNIP1-208ENST00000520931 DHX29Q7Z478 1369 aaKnown RBP23.73■■□□□ 1.39
TNIP1-208ENST00000520931 CARMIL2Q6F5E8 1435 aa23.73■■□□□ 1.39
TNIP1-208ENST00000520931 CROCC2H7BZ55 1655 aa23.72■■□□□ 1.39
TNIP1-208ENST00000520931 ADGRL2O95490 1459 aa23.72■■□□□ 1.39
TNIP1-208ENST00000520931 ADCY10Q96PN6 1610 aa23.7■■□□□ 1.38
TNIP1-208ENST00000520931 HNRNPMP52272 730 aaKnown RBP eCLIP23.68■■□□□ 1.381e-6■■■■□ 22.9
TNIP1-208ENST00000520931 CARD11Q9BXL7 1154 aa23.68■■□□□ 1.38
TNIP1-208ENST00000520931 CDC42BPAQ5VT25 1732 aa23.67■■□□□ 1.38
TNIP1-208ENST00000520931 ERICH6BQ5W0A0 696 aa23.67■■□□□ 1.38
TNIP1-208ENST00000520931 C9orf84Q5VXU9 1444 aa23.66■■□□□ 1.38
TNIP1-208ENST00000520931 TSPY4P0CV99 314 aa23.66■■□□□ 1.38
TNIP1-208ENST00000520931 TSPY10P0CW01 314 aa23.66■■□□□ 1.38
TNIP1-208ENST00000520931 KDM5CP41229 1560 aa23.64■■□□□ 1.38
TNIP1-208ENST00000520931 ATP10BO94823 1461 aa23.63■■□□□ 1.37
TNIP1-208ENST00000520931 DCAF11Q8TEB1 546 aa23.63■■□□□ 1.37
TNIP1-208ENST00000520931 NUP160Q12769 1436 aa23.61■■□□□ 1.37
TNIP1-208ENST00000520931 ST20-MTHFSA0A0A6YYL1 179 aa23.61■■□□□ 1.37
TNIP1-208ENST00000520931 ABCC10Q5T3U5 1492 aa23.6■■□□□ 1.37
TNIP1-208ENST00000520931 TMC1Q8TDI8 760 aa23.59■■□□□ 1.37
TNIP1-208ENST00000520931 KIF15Q9NS87 1388 aa23.59■■□□□ 1.37
TNIP1-208ENST00000520931 FANCIQ9NVI1 1328 aa23.57■■□□□ 1.36
TNIP1-208ENST00000520931 ABCA8O94911 1581 aa23.57■■□□□ 1.36
TNIP1-208ENST00000520931 RALGAPBQ86X10 1494 aa23.56■■□□□ 1.36
TNIP1-208ENST00000520931 NUDCQ9Y266 331 aa23.55■■□□□ 1.36
TNIP1-208ENST00000520931 UHRF1BP1Q6BDS2 1440 aa23.55■■□□□ 1.36
TNIP1-208ENST00000520931 PNISRQ8TF01 805 aaKnown RBP23.54■■□□□ 1.36
TNIP1-208ENST00000520931 SMG6Q86US8 1419 aaKnown RBP23.54■■□□□ 1.36
TNIP1-208ENST00000520931 SHANK2Q9UPX8 1470 aa23.53■■□□□ 1.36
TNIP1-208ENST00000520931 RGL3Q3MIN7 710 aa23.52■■□□□ 1.36
TNIP1-208ENST00000520931 ARID4BQ4LE39 1312 aaPredicted RBP23.52■■□□□ 1.36
TNIP1-208ENST00000520931 ERICH6Q7L0X2 663 aa23.51■■□□□ 1.35
TNIP1-208ENST00000520931 ROCK2O75116 1388 aaKnown RBP23.5■■□□□ 1.35
TNIP1-208ENST00000520931 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.49■■□□□ 1.351e-6■■■□□ 15.7
TNIP1-208ENST00000520931 SALL2Q9Y467 1007 aaPredicted RBP23.48■■□□□ 1.35
TNIP1-208ENST00000520931 ARHGEF12Q9NZN5 1544 aa23.48■■□□□ 1.35
TNIP1-208ENST00000520931 PTPRGP23470 1445 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms