RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 EFCAB2Q5VUJ9 269 aa31.55■■■□□ 2.64
CTNNA1-213ENST00000519113 ATP1B4Q9UN42 357 aaPredicted RBP31.54■■■□□ 2.64
CTNNA1-213ENST00000519113 CDK11AQ9UQ88 783 aaPredicted RBP31.53■■■□□ 2.64
CTNNA1-213ENST00000519113 FMN1Q68DA7 1419 aa31.5■■■□□ 2.63
CTNNA1-213ENST00000519113 SIGLEC1Q9BZZ2 1709 aa31.5■■■□□ 2.63
CTNNA1-213ENST00000519113 ATP10AO60312 1499 aa31.5■■■□□ 2.63
CTNNA1-213ENST00000519113 UBTFP17480 764 aaKnown RBP31.49■■■□□ 2.63
CTNNA1-213ENST00000519113 C9orf84Q5VXU9 1444 aa31.47■■■□□ 2.63
CTNNA1-213ENST00000519113 CERKQ8TCT0 537 aa31.46■■■□□ 2.63
CTNNA1-213ENST00000519113 FER1L4A9Z1Z3 1794 aa31.44■■■□□ 2.62
CTNNA1-213ENST00000519113 ARHGEF12Q9NZN5 1544 aa31.42■■■□□ 2.62
CTNNA1-213ENST00000519113 EHMT2Q96KQ7 1210 aa31.4■■■□□ 2.62
CTNNA1-213ENST00000519113 ZNF518AQ6AHZ1 1483 aa31.38■■■□□ 2.61
CTNNA1-213ENST00000519113 MYO5CQ9NQX4 1742 aa31.38■■■□□ 2.61
CTNNA1-213ENST00000519113 ARHGAP35Q9NRY4 1499 aa31.36■■■□□ 2.61
CTNNA1-213ENST00000519113 TROQ12816 1431 aaPredicted RBP31.35■■■□□ 2.61
CTNNA1-213ENST00000519113 CEBPAP49715 358 aaPredicted RBP31.35■■■□□ 2.61
CTNNA1-213ENST00000519113 AFAP1Q8N556 730 aa31.35■■■□□ 2.61
CTNNA1-213ENST00000519113 MYT1LQ9UL68 1186 aa31.34■■■□□ 2.61
CTNNA1-213ENST00000519113 CLIP1P30622 1438 aa31.33■■■□□ 2.61
CTNNA1-213ENST00000519113 KIF14Q15058 1648 aa31.33■■■□□ 2.61
CTNNA1-213ENST00000519113 DMRT2Q9Y5R5 561 aa31.32■■■□□ 2.6
CTNNA1-213ENST00000519113 ARHGAP5Q13017 1502 aa31.32■■■□□ 2.6
CTNNA1-213ENST00000519113 PREX1Q8TCU6 1659 aa31.29■■■□□ 2.6
CTNNA1-213ENST00000519113 KDM5CP41229 1560 aa31.27■■■□□ 2.6
CTNNA1-213ENST00000519113 UHRF1BP1Q6BDS2 1440 aa31.25■■■□□ 2.59
CTNNA1-213ENST00000519113 ESF1Q9H501 851 aaKnown RBP31.2■■■□□ 2.59
CTNNA1-213ENST00000519113 MLH3Q9UHC1 1453 aa31.2■■■□□ 2.58
CTNNA1-213ENST00000519113 REREQ9P2R6 1566 aa31.19■■■□□ 2.58
CTNNA1-213ENST00000519113 DIP2CQ9Y2E4 1556 aa31.18■■■□□ 2.58
CTNNA1-213ENST00000519113 SETD1BQ9UPS6 1966 aaKnown RBP31.17■■■□□ 2.58
CTNNA1-213ENST00000519113 TRAPPC8Q9Y2L5 1435 aa31.12■■■□□ 2.57
CTNNA1-213ENST00000519113 AGLP35573 1532 aa31.12■■■□□ 2.57
CTNNA1-213ENST00000519113 STRCQ7RTU9 1775 aa31.12■■■□□ 2.57
CTNNA1-213ENST00000519113 CDC42BPBQ9Y5S2 1711 aa31.1■■■□□ 2.57
CTNNA1-213ENST00000519113 CCDC18Q5T9S5 1454 aa31.1■■■□□ 2.57
CTNNA1-213ENST00000519113 ABCA6Q8N139 1617 aa31.09■■■□□ 2.57
CTNNA1-213ENST00000519113 CASKIN1Q8WXD9 1431 aa31.09■■■□□ 2.57
CTNNA1-213ENST00000519113 CHIC1Q5VXU3 224 aa31.09■■■□□ 2.57
CTNNA1-213ENST00000519113 ABCC1P33527 1531 aa31.08■■■□□ 2.57
CTNNA1-213ENST00000519113 PTPRTO14522 1441 aa31.08■■■□□ 2.57
CTNNA1-213ENST00000519113 LRRIQ1Q96JM4 1722 aa31.07■■■□□ 2.56
CTNNA1-213ENST00000519113 PREX2Q70Z35 1606 aa31.06■■■□□ 2.56
CTNNA1-213ENST00000519113 CNTLNQ9NXG0 1405 aa31.05■■■□□ 2.56
CTNNA1-213ENST00000519113 C3P01024 1663 aa31.03■■■□□ 2.56
CTNNA1-213ENST00000519113 DISP3Q9P2K9 1392 aa31■■■□□ 2.55
CTNNA1-213ENST00000519113 ITSN2Q9NZM3 1697 aa31■■■□□ 2.55
CTNNA1-213ENST00000519113 ZNF777Q9ULD5 760 aaPredicted RBP30.97■■■□□ 2.55
CTNNA1-213ENST00000519113 KIDINS220Q9ULH0 1771 aa30.96■■■□□ 2.55
CTNNA1-213ENST00000519113 NCOA1Q15788 1441 aa30.93■■■□□ 2.54
CTNNA1-213ENST00000519113 SPAG9O60271 1321 aaKnown RBP30.93■■■□□ 2.54
CTNNA1-213ENST00000519113 NPATQ14207 1427 aa30.92■■■□□ 2.54
CTNNA1-213ENST00000519113 FYCO1Q9BQS8 1478 aa30.92■■■□□ 2.54
CTNNA1-213ENST00000519113 CDC42BPAQ5VT25 1732 aa30.91■■■□□ 2.54
CTNNA1-213ENST00000519113 SAMD9LQ8IVG5 1584 aa30.91■■■□□ 2.54
CTNNA1-213ENST00000519113 ZMYM3Q14202 1370 aa30.9■■■□□ 2.54
CTNNA1-213ENST00000519113 HNRNPMP52272 730 aaKnown RBP eCLIP30.88■■■□□ 2.537e-14■■■■■ 45.2
CTNNA1-213ENST00000519113 ILDR2Q71H61 639 aa30.87■■■□□ 2.53
CTNNA1-213ENST00000519113 GPATCH8Q9UKJ3 1502 aaKnown RBP30.87■■■□□ 2.53
CTNNA1-213ENST00000519113 LTBP4Q8N2S1 1624 aa30.87■■■□□ 2.53
CTNNA1-213ENST00000519113 IQSEC2Q5JU85 1478 aa30.86■■■□□ 2.53
CTNNA1-213ENST00000519113 SYCP2Q9BX26 1530 aa30.84■■■□□ 2.53
CTNNA1-213ENST00000519113 CFDP1Q9UEE9 299 aaPredicted RBP30.84■■■□□ 2.53
CTNNA1-213ENST00000519113 KIAA1107Q9UPP5 1409 aa30.83■■■□□ 2.53
CTNNA1-213ENST00000519113 MROH2AA6NES4 1674 aa30.83■■■□□ 2.53
CTNNA1-213ENST00000519113 SOCS7O14512 581 aa30.82■■■□□ 2.52
CTNNA1-213ENST00000519113 PLEKHH2Q8IVE3 1493 aa30.82■■■□□ 2.52
CTNNA1-213ENST00000519113 CAMSAP1Q5T5Y3 1602 aa30.81■■■□□ 2.52
CTNNA1-213ENST00000519113 CCNB3Q8WWL7 1395 aa30.78■■■□□ 2.52
CTNNA1-213ENST00000519113 ATP7AQ04656 1500 aa30.78■■■□□ 2.52
CTNNA1-213ENST00000519113 NCKAP5LQ9HCH0 1330 aa30.77■■■□□ 2.52
CTNNA1-213ENST00000519113 A2MP01023 1474 aa30.76■■■□□ 2.52
CTNNA1-213ENST00000519113 PKD2Q13563 968 aa30.76■■■□□ 2.51
CTNNA1-213ENST00000519113 GGT6Q6P531 493 aa30.75■■■□□ 2.51
CTNNA1-213ENST00000519113 PPP6R1Q9UPN7 881 aa30.75■■■□□ 2.51
CTNNA1-213ENST00000519113 SUPT6HQ7KZ85 1726 aaKnown RBP30.75■■■□□ 2.51
CTNNA1-213ENST00000519113 PLXNC1O60486 1568 aa30.71■■■□□ 2.51
CTNNA1-213ENST00000519113 SPATA31D1Q6ZQQ2 1576 aa30.71■■■□□ 2.51
CTNNA1-213ENST00000519113 MTUS2Q5JR59 1369 aa30.7■■■□□ 2.51
CTNNA1-213ENST00000519113 PTPRKQ15262 1439 aa30.7■■■□□ 2.5
CTNNA1-213ENST00000519113 INO80Q9ULG1 1556 aaPredicted RBP30.7■■■□□ 2.5
CTNNA1-213ENST00000519113 ZNF335Q9H4Z2 1342 aaPredicted RBP30.7■■■□□ 2.5
CTNNA1-213ENST00000519113 PLA2R1Q13018 1463 aa30.7■■■□□ 2.5
CTNNA1-213ENST00000519113 CLTCQ00610 1675 aaKnown RBP30.68■■■□□ 2.5
CTNNA1-213ENST00000519113 UBAP1LF5GYI3 381 aa30.66■■■□□ 2.5
CTNNA1-213ENST00000519113 CEP170BQ9Y4F5 1589 aaPredicted RBP30.63■■■□□ 2.49
CTNNA1-213ENST00000519113 MYO3AQ8NEV4 1616 aa30.63■■■□□ 2.49
CTNNA1-213ENST00000519113 ZNF142P52746 1687 aaPredicted RBP30.63■■■□□ 2.49
CTNNA1-213ENST00000519113 TCOF1Q13428 1488 aaKnown RBP30.63■■■□□ 2.49
CTNNA1-213ENST00000519113 ZNF644Q9H582 1327 aaPredicted RBP30.6■■■□□ 2.49
CTNNA1-213ENST00000519113 RTEL1-TNFRSF6BF6WH68 1400 aa30.57■■■□□ 2.48
CTNNA1-213ENST00000519113 ADGBQ8N7X0 1667 aa30.57■■■□□ 2.48
CTNNA1-213ENST00000519113 MBD5Q9P267 1494 aa30.56■■■□□ 2.48
CTNNA1-213ENST00000519113 DHX29Q7Z478 1369 aaKnown RBP30.55■■■□□ 2.48
CTNNA1-213ENST00000519113 A2ML1A8K2U0 1454 aa30.54■■■□□ 2.48
CTNNA1-213ENST00000519113 TIAM1Q13009 1591 aa30.51■■■□□ 2.47
CTNNA1-213ENST00000519113 CEP162Q5TB80 1403 aa30.49■■■□□ 2.47
CTNNA1-213ENST00000519113 EHBP1L1Q8N3D4 1523 aa30.49■■■□□ 2.47
CTNNA1-213ENST00000519113 KIF3BO15066 747 aa30.48■■■□□ 2.47
CTNNA1-213ENST00000519113 TNRQ92752 1358 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms