RNA–Protein interactions for RNA: ENST00000518858.1

CLVS1-204, Transcript of clavesin 1, humanhuman

TSL 2

Gene CLVS1, Length 2,980 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-204ENST00000518858 MYT1LQ9UL68 1186 aa11.5□□□□□ -0.57
CLVS1-204ENST00000518858 MKRN4PQ13434 485 aaPredicted RBP11.49□□□□□ -0.57
CLVS1-204ENST00000518858 ZNF219Q9P2Y4 722 aaPredicted RBP11.49□□□□□ -0.57
CLVS1-204ENST00000518858 CARMIL2Q6F5E8 1435 aa11.49□□□□□ -0.57
CLVS1-204ENST00000518858 EEA1Q15075 1411 aa11.48□□□□□ -0.57
CLVS1-204ENST00000518858 VSIG10Q8N0Z9 540 aa11.48□□□□□ -0.57
CLVS1-204ENST00000518858 CDK11AQ9UQ88 783 aaPredicted RBP11.48□□□□□ -0.57
CLVS1-204ENST00000518858 UGGT2Q9NYU1 1516 aa11.48□□□□□ -0.57
CLVS1-204ENST00000518858 DISP1Q96F81 1524 aa11.47□□□□□ -0.57
CLVS1-204ENST00000518858 PTPRGP23470 1445 aa11.47□□□□□ -0.57
CLVS1-204ENST00000518858 TNIKQ9UKE5 1360 aa11.47□□□□□ -0.57
CLVS1-204ENST00000518858 SAMD1Q6SPF0 538 aaPredicted RBP11.46□□□□□ -0.57
CLVS1-204ENST00000518858 ADCY10Q96PN6 1610 aa11.46□□□□□ -0.57
CLVS1-204ENST00000518858 PAK3O75914 559 aaPredicted RBP11.46□□□□□ -0.58
CLVS1-204ENST00000518858 UBTFP17480 764 aaKnown RBP11.45□□□□□ -0.58
CLVS1-204ENST00000518858 NPM1P06748 294 aaKnown RBP eCLIP11.45□□□□□ -0.58
CLVS1-204ENST00000518858 ERICH6BQ5W0A0 696 aa11.45□□□□□ -0.58
CLVS1-204ENST00000518858 KIAA0556O60303 1618 aa11.44□□□□□ -0.58
CLVS1-204ENST00000518858 DDX10Q13206 875 aaKnown RBP11.43□□□□□ -0.58
CLVS1-204ENST00000518858 CFAP44Q96MT7 982 aa11.42□□□□□ -0.58
CLVS1-204ENST00000518858 PAXIP1Q6ZW49 1069 aaPredicted RBP11.41□□□□□ -0.58
CLVS1-204ENST00000518858 GOLGA3Q08378 1498 aa11.4□□□□□ -0.58
CLVS1-204ENST00000518858 DHX57Q6P158 1386 aaKnown RBP11.4□□□□□ -0.58
CLVS1-204ENST00000518858 KIF13AQ9H1H9 1805 aa11.4□□□□□ -0.59
CLVS1-204ENST00000518858 MAPKBP1O60336 1514 aa11.39□□□□□ -0.59
CLVS1-204ENST00000518858 NOP58Q9Y2X3 529 aaKnown RBP11.39□□□□□ -0.59
CLVS1-204ENST00000518858 KIF21BO75037 1637 aa11.39□□□□□ -0.59
CLVS1-204ENST00000518858 UACAQ9BZF9 1416 aa11.38□□□□□ -0.59
CLVS1-204ENST00000518858 PROM2Q8N271 834 aa11.38□□□□□ -0.59
CLVS1-204ENST00000518858 UHRF1BP1LA0JNW5 1464 aa11.38□□□□□ -0.59
CLVS1-204ENST00000518858 EIF5BO60841 1220 aaKnown RBP11.37□□□□□ -0.59
CLVS1-204ENST00000518858 ABCC2Q92887 1545 aa11.37□□□□□ -0.59
CLVS1-204ENST00000518858 ABCC10Q5T3U5 1492 aa11.35□□□□□ -0.59
CLVS1-204ENST00000518858 HIRIP3Q9BW71 556 aaPredicted RBP11.35□□□□□ -0.59
CLVS1-204ENST00000518858 DIP2BQ9P265 1576 aa11.34□□□□□ -0.59
CLVS1-204ENST00000518858 SAMD9Q5K651 1589 aa11.34□□□□□ -0.59
CLVS1-204ENST00000518858 PLB1Q6P1J6 1458 aa11.34□□□□□ -0.59
CLVS1-204ENST00000518858 FAM69CQ0P6D2 419 aa11.34□□□□□ -0.59
CLVS1-204ENST00000518858 P3H3Q8IVL6 736 aa11.34□□□□□ -0.59
CLVS1-204ENST00000518858 RTL5Q5HYW3 569 aaPredicted RBP11.33□□□□□ -0.6
CLVS1-204ENST00000518858 KDM5BQ9UGL1 1544 aa11.33□□□□□ -0.6
CLVS1-204ENST00000518858 TIMELESSQ9UNS1 1208 aa11.32□□□□□ -0.6
CLVS1-204ENST00000518858 ZCCHC11Q5TAX3 1644 aaKnown RBP11.32□□□□□ -0.6
CLVS1-204ENST00000518858 ABCA8O94911 1581 aa11.32□□□□□ -0.6
CLVS1-204ENST00000518858 RANGAP1P46060 587 aaPredicted RBP11.31□□□□□ -0.6
CLVS1-204ENST00000518858 ASXL2Q76L83 1435 aa11.31□□□□□ -0.6
CLVS1-204ENST00000518858 B4GALNT3Q6L9W6 998 aa11.31□□□□□ -0.6
CLVS1-204ENST00000518858 PKNOX2Q96KN3 472 aa11.28□□□□□ -0.6
CLVS1-204ENST00000518858 TSPOAP1O95153 1857 aa11.28□□□□□ -0.6
CLVS1-204ENST00000518858 FHOD3Q2V2M9 1422 aa11.26□□□□□ -0.61
CLVS1-204ENST00000518858 EFCAB5A4FU69 1503 aa11.26□□□□□ -0.61
CLVS1-204ENST00000518858 GLI2P10070 1586 aa11.26□□□□□ -0.61
CLVS1-204ENST00000518858 HNRNPUQ00839 825 aaKnown RBP eCLIP11.25□□□□□ -0.61
CLVS1-204ENST00000518858 ECM2O94769 699 aaPredicted RBP11.25□□□□□ -0.61
CLVS1-204ENST00000518858 RAPGEF6Q8TEU7 1601 aa11.25□□□□□ -0.61
CLVS1-204ENST00000518858 EPRSP07814 1512 aaKnown RBP11.25□□□□□ -0.61
CLVS1-204ENST00000518858 BBXQ8WY36 941 aaPredicted RBP11.25□□□□□ -0.61
CLVS1-204ENST00000518858 TULP1O00294 542 aaPredicted RBP11.24□□□□□ -0.61
CLVS1-204ENST00000518858 RGL2O15211 777 aa11.24□□□□□ -0.61
CLVS1-204ENST00000518858 ANP32CO43423 234 aa11.24□□□□□ -0.61
CLVS1-204ENST00000518858 PPP1R15AO75807 674 aaPredicted RBP11.24□□□□□ -0.61
CLVS1-204ENST00000518858 WDR7Q9Y4E6 1490 aa11.24□□□□□ -0.61
CLVS1-204ENST00000518858 ARID3CA6NKF2 412 aa11.23□□□□□ -0.61
CLVS1-204ENST00000518858 PPP4R2Q9NY27 417 aa11.23□□□□□ -0.61
CLVS1-204ENST00000518858 BRPF3Q9ULD4 1205 aa11.23□□□□□ -0.61
CLVS1-204ENST00000518858 ATP10BO94823 1461 aa11.22□□□□□ -0.61
CLVS1-204ENST00000518858 PPRC1Q5VV67 1664 aaKnown RBP11.22□□□□□ -0.61
CLVS1-204ENST00000518858 MAP3K4Q9Y6R4 1608 aa11.21□□□□□ -0.61
CLVS1-204ENST00000518858 ZBTB47Q9UFB7 747 aaPredicted RBP11.21□□□□□ -0.62
CLVS1-204ENST00000518858 CCER2I3L3R5 266 aa11.2□□□□□ -0.62
CLVS1-204ENST00000518858 NUP153P49790 1475 aaKnown RBP11.2□□□□□ -0.62
CLVS1-204ENST00000518858 ARHGAP35Q9NRY4 1499 aa11.2□□□□□ -0.62
CLVS1-204ENST00000518858 IPO9Q96P70 1041 aaKnown RBP11.2□□□□□ -0.62
CLVS1-204ENST00000518858 CLIP1P30622 1438 aa11.2□□□□□ -0.62
CLVS1-204ENST00000518858 LAS1LQ9Y4W2 734 aaKnown RBP11.19□□□□□ -0.62
CLVS1-204ENST00000518858 KLHL34Q8N239 644 aa11.19□□□□□ -0.62
CLVS1-204ENST00000518858 PLEKHG5O94827 1062 aa11.18□□□□□ -0.62
CLVS1-204ENST00000518858 KDM6BO15054 1643 aa11.18□□□□□ -0.62
CLVS1-204ENST00000518858 ANP32AP39687 249 aaKnown RBP11.18□□□□□ -0.62
CLVS1-204ENST00000518858 SIN3AQ96ST3 1273 aa11.17□□□□□ -0.62
CLVS1-204ENST00000518858 CFAP43Q8NDM7 1665 aa11.17□□□□□ -0.62
CLVS1-204ENST00000518858 NEFMP07197 916 aa11.16□□□□□ -0.62
CLVS1-204ENST00000518858 FMN1Q68DA7 1419 aa11.16□□□□□ -0.62
CLVS1-204ENST00000518858 WASHC2AQ641Q2 1341 aa11.15□□□□□ -0.62
CLVS1-204ENST00000518858 VPS8Q8N3P4 1428 aa11.15□□□□□ -0.62
CLVS1-204ENST00000518858 TEX14Q8IWB6 1497 aa11.15□□□□□ -0.62
CLVS1-204ENST00000518858 CD109Q6YHK3 1445 aa11.15□□□□□ -0.62
CLVS1-204ENST00000518858 NPM2Q86SE8 214 aaKnown RBP11.14□□□□□ -0.63
CLVS1-204ENST00000518858 MAGI3Q5TCQ9 1506 aa11.13□□□□□ -0.63
CLVS1-204ENST00000518858 HECW1Q76N89 1606 aa11.12□□□□□ -0.63
CLVS1-204ENST00000518858 ABCA9Q8IUA7 1624 aa11.12□□□□□ -0.63
CLVS1-204ENST00000518858 SPRYD3Q8NCJ5 442 aa11.12□□□□□ -0.63
CLVS1-204ENST00000518858 CDK13Q14004 1512 aaKnown RBP11.12□□□□□ -0.63
CLVS1-204ENST00000518858 PLEKHD1A6NEE1 506 aa11.12□□□□□ -0.63
CLVS1-204ENST00000518858 POLA2Q14181 598 aa11.12□□□□□ -0.63
CLVS1-204ENST00000518858 KANK4Q5T7N3 995 aaPredicted RBP11.12□□□□□ -0.63
CLVS1-204ENST00000518858 ATP1B4Q9UN42 357 aaPredicted RBP11.12□□□□□ -0.63
CLVS1-204ENST00000518858 SPINK5Q9NQ38 1064 aaPredicted RBP11.11□□□□□ -0.63
CLVS1-204ENST00000518858 COL17A1Q9UMD9 1497 aaPredicted RBP11.11□□□□□ -0.63
CLVS1-204ENST00000518858 C11orf95C9JLR9 678 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms