RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 ABCC5O15440 1437 aa24.26■■□□□ 1.47
PCM1-206ENST00000518537 ZNF777Q9ULD5 760 aaPredicted RBP24.25■■□□□ 1.47
PCM1-206ENST00000518537 ZNF316A6NFI3 1004 aaPredicted RBP24.23■■□□□ 1.47
PCM1-206ENST00000518537 ROCK1Q13464 1354 aa24.22■■□□□ 1.47
PCM1-206ENST00000518537 UHRF1BP1LA0JNW5 1464 aa24.22■■□□□ 1.47
PCM1-206ENST00000518537 ZCCHC11Q5TAX3 1644 aaKnown RBP24.17■■□□□ 1.46
PCM1-206ENST00000518537 CROCC2H7BZ55 1655 aa24.16■■□□□ 1.46
PCM1-206ENST00000518537 KDM6BO15054 1643 aa24.16■■□□□ 1.46
PCM1-206ENST00000518537 ADGBQ8N7X0 1667 aa24.16■■□□□ 1.46
PCM1-206ENST00000518537 SIN3AQ96ST3 1273 aa24.15■■□□□ 1.46
PCM1-206ENST00000518537 OSCARQ8IYS5 282 aa24.14■■□□□ 1.45
PCM1-206ENST00000518537 NEUROD1Q13562 356 aa24.13■■□□□ 1.45
PCM1-206ENST00000518537 PREX2Q70Z35 1606 aa24.13■■□□□ 1.45
PCM1-206ENST00000518537 KDM5BQ9UGL1 1544 aa24.13■■□□□ 1.45
PCM1-206ENST00000518537 TRIM52Q96A61 297 aa24.12■■□□□ 1.45
PCM1-206ENST00000518537 CDC42BPBQ9Y5S2 1711 aa24.11■■□□□ 1.45
PCM1-206ENST00000518537 ACIN1Q9UKV3 1341 aaKnown RBP24.11■■□□□ 1.45
PCM1-206ENST00000518537 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.1■■□□□ 1.45
PCM1-206ENST00000518537 TTC37Q6PGP7 1564 aa24.09■■□□□ 1.45
PCM1-206ENST00000518537 DIEXFQ68CQ4 756 aaKnown RBP24.09■■□□□ 1.45
PCM1-206ENST00000518537 ADGRL2O95490 1459 aa24.08■■□□□ 1.45
PCM1-206ENST00000518537 TIMELESSQ9UNS1 1208 aa24.07■■□□□ 1.44
PCM1-206ENST00000518537 NCOA1Q15788 1441 aa24.06■■□□□ 1.44
PCM1-206ENST00000518537 KCNH8Q96L42 1107 aa24.06■■□□□ 1.44
PCM1-206ENST00000518537 MYO5CQ9NQX4 1742 aa24.06■■□□□ 1.44
PCM1-206ENST00000518537 ANKRD30AQ9BXX3 1397 aa24.05■■□□□ 1.44
PCM1-206ENST00000518537 ARHGEF5Q12774 1597 aa24.05■■□□□ 1.44
PCM1-206ENST00000518537 SAMD9LQ8IVG5 1584 aa24.05■■□□□ 1.44
PCM1-206ENST00000518537 SHANK2Q9UPX8 1470 aa24.05■■□□□ 1.44
PCM1-206ENST00000518537 ARHGAP5Q13017 1502 aa24.03■■□□□ 1.44
PCM1-206ENST00000518537 HNRNPMP52272 730 aaKnown RBP eCLIP24.02■■□□□ 1.44
PCM1-206ENST00000518537 C9orf84Q5VXU9 1444 aa24.01■■□□□ 1.43
PCM1-206ENST00000518537 TSPY4P0CV99 314 aa24.01■■□□□ 1.43
PCM1-206ENST00000518537 TSPY10P0CW01 314 aa24.01■■□□□ 1.43
PCM1-206ENST00000518537 MPHOSPH9Q99550 1183 aa24■■□□□ 1.43
PCM1-206ENST00000518537 MBD5Q9P267 1494 aa23.99■■□□□ 1.43
PCM1-206ENST00000518537 DENND4BO75064 1496 aaPredicted RBP23.97■■□□□ 1.43
PCM1-206ENST00000518537 CCDC141Q6ZP82 1450 aa23.97■■□□□ 1.43
PCM1-206ENST00000518537 RSPH4AQ5TD94 716 aa23.97■■□□□ 1.43
PCM1-206ENST00000518537 TONSLQ96HA7 1378 aa23.96■■□□□ 1.43
PCM1-206ENST00000518537 PLEKHH2Q8IVE3 1493 aa23.94■■□□□ 1.42
PCM1-206ENST00000518537 SYCP2Q9BX26 1530 aa23.94■■□□□ 1.42
PCM1-206ENST00000518537 PLCH2O75038 1416 aa23.93■■□□□ 1.42
PCM1-206ENST00000518537 WDR7Q9Y4E6 1490 aa23.92■■□□□ 1.42
PCM1-206ENST00000518537 ANKRD50Q9ULJ7 1429 aa23.92■■□□□ 1.42
PCM1-206ENST00000518537 PPP1R15AO75807 674 aaPredicted RBP23.91■■□□□ 1.42
PCM1-206ENST00000518537 KIAA1107Q9UPP5 1409 aa23.9■■□□□ 1.42
PCM1-206ENST00000518537 EFCAB2Q5VUJ9 269 aa23.89■■□□□ 1.41
PCM1-206ENST00000518537 SLC4A1APQ9BWU0 796 aaKnown RBP23.89■■□□□ 1.41
PCM1-206ENST00000518537 KIF15Q9NS87 1388 aa23.87■■□□□ 1.41
PCM1-206ENST00000518537 MAST1Q9Y2H9 1570 aa23.87■■□□□ 1.41
PCM1-206ENST00000518537 PZPP20742 1482 aa23.86■■□□□ 1.41
PCM1-206ENST00000518537 FOXD1Q16676 465 aa23.85■■□□□ 1.41
PCM1-206ENST00000518537 NPM1P06748 294 aaKnown RBP eCLIP23.84■■□□□ 1.41
PCM1-206ENST00000518537 ARAP3Q8WWN8 1544 aa23.83■■□□□ 1.41
PCM1-206ENST00000518537 ASXL2Q76L83 1435 aa23.83■■□□□ 1.41
PCM1-206ENST00000518537 ANKRD30BQ9BXX2 1392 aa23.81■■□□□ 1.4
PCM1-206ENST00000518537 ABCC1P33527 1531 aa23.81■■□□□ 1.4
PCM1-206ENST00000518537 ARHGEF12Q9NZN5 1544 aa23.81■■□□□ 1.4
PCM1-206ENST00000518537 ABCA9Q8IUA7 1624 aa23.81■■□□□ 1.4
PCM1-206ENST00000518537 PLXNC1O60486 1568 aa23.77■■□□□ 1.4
PCM1-206ENST00000518537 NUP155O75694 1391 aa23.77■■□□□ 1.39
PCM1-206ENST00000518537 KDM5DQ9BY66 1539 aa23.76■■□□□ 1.39
PCM1-206ENST00000518537 RPRD2Q5VT52 1461 aaKnown RBP23.74■■□□□ 1.39
PCM1-206ENST00000518537 PKD2Q13563 968 aa23.73■■□□□ 1.39
PCM1-206ENST00000518537 TRAPPC8Q9Y2L5 1435 aa23.72■■□□□ 1.39
PCM1-206ENST00000518537 FANCAO15360 1455 aa23.71■■□□□ 1.39
PCM1-206ENST00000518537 DUOX2Q9NRD8 1548 aa23.69■■□□□ 1.38
PCM1-206ENST00000518537 L3MBTL2Q969R5 705 aa23.67■■□□□ 1.38
PCM1-206ENST00000518537 UNC13BO14795 1591 aa23.66■■□□□ 1.38
PCM1-206ENST00000518537 SPAG9O60271 1321 aaKnown RBP23.65■■□□□ 1.38
PCM1-206ENST00000518537 MIER1Q8N108 512 aa23.65■■□□□ 1.38
PCM1-206ENST00000518537 RTEL1-TNFRSF6BF6WH68 1400 aa23.63■■□□□ 1.37
PCM1-206ENST00000518537 FAM135AQ9P2D6 1515 aa23.63■■□□□ 1.37
PCM1-206ENST00000518537 ERBINQ96RT1 1412 aa23.63■■□□□ 1.37
PCM1-206ENST00000518537 AFAP1Q8N556 730 aa23.62■■□□□ 1.37
PCM1-206ENST00000518537 ADGRL1O94910 1474 aa23.62■■□□□ 1.37
PCM1-206ENST00000518537 TEX14Q8IWB6 1497 aa23.62■■□□□ 1.37
PCM1-206ENST00000518537 ZFYVE16Q7Z3T8 1539 aa23.6■■□□□ 1.37
PCM1-206ENST00000518537 SCAPERQ9BY12 1400 aa23.6■■□□□ 1.37
PCM1-206ENST00000518537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.58■■□□□ 1.377e-7■□□□□ 10.9
PCM1-206ENST00000518537 CD109Q6YHK3 1445 aa23.58■■□□□ 1.36
PCM1-206ENST00000518537 RIMBP3CA6NJZ7 1639 aa23.57■■□□□ 1.36
PCM1-206ENST00000518537 RIMBP3BA6NNM3 1639 aa23.57■■□□□ 1.36
PCM1-206ENST00000518537 RIMBP3Q9UFD9 1639 aa23.57■■□□□ 1.36
PCM1-206ENST00000518537 CFAP74Q9C0B2 1584 aa23.57■■□□□ 1.36
PCM1-206ENST00000518537 IQGAP3Q86VI3 1631 aa23.57■■□□□ 1.36
PCM1-206ENST00000518537 HIRIP3Q9BW71 556 aaPredicted RBP23.57■■□□□ 1.36
PCM1-206ENST00000518537 INO80Q9ULG1 1556 aaPredicted RBP23.56■■□□□ 1.36
PCM1-206ENST00000518537 ATP7AQ04656 1500 aa23.55■■□□□ 1.36
PCM1-206ENST00000518537 CYB5RLQ6IPT4 315 aa23.55■■□□□ 1.36
PCM1-206ENST00000518537 MAGI2Q86UL8 1455 aa23.53■■□□□ 1.36
PCM1-206ENST00000518537 MYT1LQ9UL68 1186 aa23.53■■□□□ 1.36
PCM1-206ENST00000518537 NBPF8Q3BBV2 869 aa23.49■■□□□ 1.35
PCM1-206ENST00000518537 ZNF518AQ6AHZ1 1483 aa23.47■■□□□ 1.35
PCM1-206ENST00000518537 DDX10Q13206 875 aaKnown RBP23.47■■□□□ 1.35
PCM1-206ENST00000518537 EIF4G2P78344 907 aaKnown RBP eCLIP23.46■■□□□ 1.35
PCM1-206ENST00000518537 HSPA5P11021 654 aaKnown RBP23.45■■□□□ 1.34
PCM1-206ENST00000518537 KIDINS220Q9ULH0 1771 aa23.43■■□□□ 1.34
PCM1-206ENST00000518537 CCDC144AA2RUR9 1427 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms