RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 ABCC5O15440 1437 aa34.54■■■■□ 3.12
SLIT3-204ENST00000518140 DAPK1P53355 1430 aa34.53■■■■□ 3.12
SLIT3-204ENST00000518140 CLSPNQ9HAW4 1339 aa34.47■■■■□ 3.11
SLIT3-204ENST00000518140 DNMT1P26358 1616 aaKnown RBP34.47■■■■□ 3.11
SLIT3-204ENST00000518140 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.45■■■■□ 3.11
SLIT3-204ENST00000518140 TTC37Q6PGP7 1564 aa34.43■■■■□ 3.1
SLIT3-204ENST00000518140 MAPKBP1O60336 1514 aa34.37■■■■□ 3.09
SLIT3-204ENST00000518140 AKNAQ7Z591 1439 aa34.37■■■■□ 3.09
SLIT3-204ENST00000518140 CDC42BPBQ9Y5S2 1711 aa34.36■■■■□ 3.09
SLIT3-204ENST00000518140 HNRNPMP52272 730 aaKnown RBP eCLIP34.35■■■■□ 3.09
SLIT3-204ENST00000518140 ROCK1Q13464 1354 aa34.35■■■■□ 3.09
SLIT3-204ENST00000518140 PREX2Q70Z35 1606 aa34.34■■■■□ 3.09
SLIT3-204ENST00000518140 KDM6BO15054 1643 aa34.33■■■■□ 3.09
SLIT3-204ENST00000518140 GCC2Q8IWJ2 1684 aa34.3■■■■□ 3.08
SLIT3-204ENST00000518140 SAMD9LQ8IVG5 1584 aa34.28■■■■□ 3.08
SLIT3-204ENST00000518140 WDR7Q9Y4E6 1490 aa34.27■■■■□ 3.08
SLIT3-204ENST00000518140 ARHGAP5Q13017 1502 aa34.27■■■■□ 3.08
SLIT3-204ENST00000518140 MBD5Q9P267 1494 aa34.26■■■■□ 3.07
SLIT3-204ENST00000518140 NCOA1Q15788 1441 aa34.25■■■■□ 3.07
SLIT3-204ENST00000518140 ASXL2Q76L83 1435 aa34.24■■■■□ 3.07
SLIT3-204ENST00000518140 PLCH2O75038 1416 aa34.23■■■■□ 3.07
SLIT3-204ENST00000518140 MYO5CQ9NQX4 1742 aa34.22■■■■□ 3.07
SLIT3-204ENST00000518140 CROCC2H7BZ55 1655 aa34.21■■■■□ 3.07
SLIT3-204ENST00000518140 NPM1P06748 294 aaKnown RBP eCLIP34.21■■■■□ 3.07
SLIT3-204ENST00000518140 SIN3AQ96ST3 1273 aa34.2■■■■□ 3.07
SLIT3-204ENST00000518140 TRIM52Q96A61 297 aa34.19■■■■□ 3.06
SLIT3-204ENST00000518140 ADGRL2O95490 1459 aa34.18■■■■□ 3.06
SLIT3-204ENST00000518140 TSPY4P0CV99 314 aa34.17■■■■□ 3.06
SLIT3-204ENST00000518140 TSPY10P0CW01 314 aa34.17■■■■□ 3.06
SLIT3-204ENST00000518140 C9orf84Q5VXU9 1444 aa34.17■■■■□ 3.06
SLIT3-204ENST00000518140 ARHGEF5Q12774 1597 aa34.15■■■■□ 3.06
SLIT3-204ENST00000518140 CYB5RLQ6IPT4 315 aa34.15■■■■□ 3.06
SLIT3-204ENST00000518140 ANKRD30AQ9BXX3 1397 aa34.15■■■■□ 3.06
SLIT3-204ENST00000518140 EFCAB2Q5VUJ9 269 aa34.14■■■■□ 3.06
SLIT3-204ENST00000518140 SYCP2Q9BX26 1530 aa34.14■■■■□ 3.06
SLIT3-204ENST00000518140 ADGBQ8N7X0 1667 aa34.13■■■■□ 3.05
SLIT3-204ENST00000518140 SHANK2Q9UPX8 1470 aa34.13■■■■□ 3.05
SLIT3-204ENST00000518140 NEUROD1Q13562 356 aa34.12■■■■□ 3.05
SLIT3-204ENST00000518140 CCDC141Q6ZP82 1450 aa34.1■■■■□ 3.05
SLIT3-204ENST00000518140 ARHGEF12Q9NZN5 1544 aa34.1■■■■□ 3.05
SLIT3-204ENST00000518140 RSPH4AQ5TD94 716 aa34.1■■■■□ 3.05
SLIT3-204ENST00000518140 KIAA1107Q9UPP5 1409 aa34.08■■■■□ 3.05
SLIT3-204ENST00000518140 DENND4BO75064 1496 aaPredicted RBP34.07■■■■□ 3.05
SLIT3-204ENST00000518140 RIMBP3CA6NJZ7 1639 aa34.07■■■■□ 3.04
SLIT3-204ENST00000518140 RIMBP3BA6NNM3 1639 aa34.07■■■■□ 3.04
SLIT3-204ENST00000518140 RIMBP3Q9UFD9 1639 aa34.07■■■■□ 3.04
SLIT3-204ENST00000518140 MPHOSPH9Q99550 1183 aa34.05■■■■□ 3.04
SLIT3-204ENST00000518140 PLEKHH2Q8IVE3 1493 aa34.04■■■■□ 3.04
SLIT3-204ENST00000518140 ABCA9Q8IUA7 1624 aa34.03■■■■□ 3.04
SLIT3-204ENST00000518140 ANKRD50Q9ULJ7 1429 aa34.01■■■■□ 3.03
SLIT3-204ENST00000518140 KIF15Q9NS87 1388 aa33.99■■■■□ 3.03
SLIT3-204ENST00000518140 ARAP3Q8WWN8 1544 aa33.98■■■■□ 3.03
SLIT3-204ENST00000518140 FOXD1Q16676 465 aa33.97■■■■□ 3.03
SLIT3-204ENST00000518140 TRAPPC8Q9Y2L5 1435 aa33.97■■■■□ 3.03
SLIT3-204ENST00000518140 ABCC1P33527 1531 aa33.96■■■■□ 3.03
SLIT3-204ENST00000518140 FANCAO15360 1455 aa33.93■■■■□ 3.02
SLIT3-204ENST00000518140 ACIN1Q9UKV3 1341 aaKnown RBP33.92■■■■□ 3.02
SLIT3-204ENST00000518140 AFAP1Q8N556 730 aa33.91■■■■□ 3.02
SLIT3-204ENST00000518140 SLC4A1APQ9BWU0 796 aaKnown RBP33.91■■■■□ 3.02
SLIT3-204ENST00000518140 MAST1Q9Y2H9 1570 aa33.89■■■■□ 3.02
SLIT3-204ENST00000518140 PZPP20742 1482 aa33.88■■■■□ 3.01
SLIT3-204ENST00000518140 ZNF316A6NFI3 1004 aaPredicted RBP33.86■■■■□ 3.01
SLIT3-204ENST00000518140 CD109Q6YHK3 1445 aa33.84■■■■□ 3.01
SLIT3-204ENST00000518140 TIMELESSQ9UNS1 1208 aa33.83■■■■□ 3.01
SLIT3-204ENST00000518140 SCAPERQ9BY12 1400 aa33.8■■■■□ 3
SLIT3-204ENST00000518140 NUP155O75694 1391 aa33.8■■■■□ 3
SLIT3-204ENST00000518140 ADGRL1O94910 1474 aa33.79■■■■□ 3
SLIT3-204ENST00000518140 SPAG9O60271 1321 aaKnown RBP33.79■■■■□ 3
SLIT3-204ENST00000518140 ANKRD30BQ9BXX2 1392 aa33.78■■■■□ 3
SLIT3-204ENST00000518140 PLXNC1O60486 1568 aa33.76■■■□□ 2.99
SLIT3-204ENST00000518140 PPP1R15AO75807 674 aaPredicted RBP33.75■■■□□ 2.99
SLIT3-204ENST00000518140 TONSLQ96HA7 1378 aa33.74■■■□□ 2.99
SLIT3-204ENST00000518140 PKD2Q13563 968 aa33.73■■■□□ 2.99
SLIT3-204ENST00000518140 RTEL1-TNFRSF6BF6WH68 1400 aa33.68■■■□□ 2.98
SLIT3-204ENST00000518140 DUOX2Q9NRD8 1548 aa33.68■■■□□ 2.98
SLIT3-204ENST00000518140 ZFYVE16Q7Z3T8 1539 aa33.66■■■□□ 2.98
SLIT3-204ENST00000518140 KDM5DQ9BY66 1539 aa33.65■■■□□ 2.98
SLIT3-204ENST00000518140 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.65■■■□□ 2.98
SLIT3-204ENST00000518140 MYT1LQ9UL68 1186 aa33.62■■■□□ 2.97
SLIT3-204ENST00000518140 ERBINQ96RT1 1412 aa33.6■■■□□ 2.97
SLIT3-204ENST00000518140 ATP7AQ04656 1500 aa33.59■■■□□ 2.97
SLIT3-204ENST00000518140 FAM69CQ0P6D2 419 aa33.59■■■□□ 2.97
SLIT3-204ENST00000518140 DIEXFQ68CQ4 756 aaKnown RBP33.58■■■□□ 2.97
SLIT3-204ENST00000518140 INO80Q9ULG1 1556 aaPredicted RBP33.58■■■□□ 2.97
SLIT3-204ENST00000518140 RPRD2Q5VT52 1461 aaKnown RBP33.57■■■□□ 2.96
SLIT3-204ENST00000518140 FAM135AQ9P2D6 1515 aa33.57■■■□□ 2.96
SLIT3-204ENST00000518140 L3MBTL2Q969R5 705 aa33.56■■■□□ 2.96
SLIT3-204ENST00000518140 UNC13BO14795 1591 aa33.55■■■□□ 2.96
SLIT3-204ENST00000518140 CFAP74Q9C0B2 1584 aa33.55■■■□□ 2.96
SLIT3-204ENST00000518140 MAP3K4Q9Y6R4 1608 aa33.55■■■□□ 2.96
SLIT3-204ENST00000518140 ZNF518AQ6AHZ1 1483 aa33.54■■■□□ 2.96
SLIT3-204ENST00000518140 GLI2P10070 1586 aa33.54■■■□□ 2.96
SLIT3-204ENST00000518140 POGZQ7Z3K3 1410 aa33.52■■■□□ 2.96
SLIT3-204ENST00000518140 NEO1Q92859 1461 aa33.52■■■□□ 2.96
SLIT3-204ENST00000518140 RAPGEF3O95398 923 aa33.51■■■□□ 2.96
SLIT3-204ENST00000518140 DIP2BQ9P265 1576 aa33.49■■■□□ 2.95
SLIT3-204ENST00000518140 KIDINS220Q9ULH0 1771 aa33.48■■■□□ 2.95
SLIT3-204ENST00000518140 MAGI2Q86UL8 1455 aa33.46■■■□□ 2.95
SLIT3-204ENST00000518140 DHX29Q7Z478 1369 aaKnown RBP33.45■■■□□ 2.95
SLIT3-204ENST00000518140 KDM5CP41229 1560 aa33.44■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms