RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 MYO5CQ9NQX4 1742 aa15.23■□□□□ 0.03
LINCR-0001-201ENST00000517732 PREX1Q8TCU6 1659 aa15.23■□□□□ 0.03
LINCR-0001-201ENST00000517732 YEATS2Q9ULM3 1422 aa15.22■□□□□ 0.03
LINCR-0001-201ENST00000517732 MLECQ14165 292 aa15.21■□□□□ 0.03
LINCR-0001-201ENST00000517732 CERKQ8TCT0 537 aa15.19■□□□□ 0.02
LINCR-0001-201ENST00000517732 SCAPERQ9BY12 1400 aa15.18■□□□□ 0.02
LINCR-0001-201ENST00000517732 CDK13Q14004 1512 aaKnown RBP15.18■□□□□ 0.02
LINCR-0001-201ENST00000517732 C9orf84Q5VXU9 1444 aa15.17■□□□□ 0.02
LINCR-0001-201ENST00000517732 SETD1BQ9UPS6 1966 aaKnown RBP15.17■□□□□ 0.02
LINCR-0001-201ENST00000517732 PLCH2O75038 1416 aa15.17■□□□□ 0.02
LINCR-0001-201ENST00000517732 ATP10AO60312 1499 aa15.16■□□□□ 0.02
LINCR-0001-201ENST00000517732 ARHGEF12Q9NZN5 1544 aa15.16■□□□□ 0.02
LINCR-0001-201ENST00000517732 KIF14Q15058 1648 aa15.14■□□□□ 0.01
LINCR-0001-201ENST00000517732 EFCAB2Q5VUJ9 269 aa15.13■□□□□ 0.01
LINCR-0001-201ENST00000517732 ATP1B4Q9UN42 357 aaPredicted RBP15.12■□□□□ 0.01
LINCR-0001-201ENST00000517732 CDK11AQ9UQ88 783 aaPredicted RBP15.12■□□□□ 0.01
LINCR-0001-201ENST00000517732 DMRT2Q9Y5R5 561 aa15.12■□□□□ 0.01
LINCR-0001-201ENST00000517732 ZNF518AQ6AHZ1 1483 aa15.12■□□□□ 0.01
LINCR-0001-201ENST00000517732 FMN1Q68DA7 1419 aa15.11■□□□□ 0.01
LINCR-0001-201ENST00000517732 MYT1LQ9UL68 1186 aa15.11■□□□□ 0.01
LINCR-0001-201ENST00000517732 STRCQ7RTU9 1775 aa15.11■□□□□ 0.01
LINCR-0001-201ENST00000517732 UHRF1BP1Q6BDS2 1440 aa15.1■□□□□ 0.01
LINCR-0001-201ENST00000517732 ARHGAP5Q13017 1502 aa15.1■□□□□ 0.01
LINCR-0001-201ENST00000517732 CLIP1P30622 1438 aa15.09■□□□□ 0.01
LINCR-0001-201ENST00000517732 KDM5CP41229 1560 aa15.08■□□□□ 0
LINCR-0001-201ENST00000517732 C3P01024 1663 aa15.06■□□□□ 0
LINCR-0001-201ENST00000517732 CEBPAP49715 358 aaPredicted RBP15.06■□□□□ 0
LINCR-0001-201ENST00000517732 REREQ9P2R6 1566 aa15.06■□□□□ 0
LINCR-0001-201ENST00000517732 DIP2CQ9Y2E4 1556 aa15.06■□□□□ 0
LINCR-0001-201ENST00000517732 ESF1Q9H501 851 aaKnown RBP15.05■□□□□ -0
LINCR-0001-201ENST00000517732 DISP3Q9P2K9 1392 aa15.05■□□□□ -0
LINCR-0001-201ENST00000517732 TROQ12816 1431 aaPredicted RBP15.05■□□□□ -0
LINCR-0001-201ENST00000517732 CDC42BPBQ9Y5S2 1711 aa15.05■□□□□ -0
LINCR-0001-201ENST00000517732 UBTFP17480 764 aaKnown RBP15.04■□□□□ -0
LINCR-0001-201ENST00000517732 ABCA6Q8N139 1617 aa15.03■□□□□ -0
LINCR-0001-201ENST00000517732 LRRIQ1Q96JM4 1722 aa15.03■□□□□ -0
LINCR-0001-201ENST00000517732 PREX2Q70Z35 1606 aa15.03■□□□□ -0
LINCR-0001-201ENST00000517732 ITSN2Q9NZM3 1697 aa15.02□□□□□ -0.01
LINCR-0001-201ENST00000517732 AFAP1Q8N556 730 aa15.01□□□□□ -0.01
LINCR-0001-201ENST00000517732 ARHGAP35Q9NRY4 1499 aa15.01□□□□□ -0.01
LINCR-0001-201ENST00000517732 PTPRTO14522 1441 aa15□□□□□ -0.01
LINCR-0001-201ENST00000517732 SPATA31D1Q6ZQQ2 1576 aa15□□□□□ -0.01
LINCR-0001-201ENST00000517732 FOXD1Q16676 465 aa15□□□□□ -0.01
LINCR-0001-201ENST00000517732 MLH3Q9UHC1 1453 aa15□□□□□ -0.01
LINCR-0001-201ENST00000517732 AGLP35573 1532 aa14.99□□□□□ -0.01
LINCR-0001-201ENST00000517732 ABCC1P33527 1531 aa14.98□□□□□ -0.01
LINCR-0001-201ENST00000517732 EHMT2Q96KQ7 1210 aa14.98□□□□□ -0.01
LINCR-0001-201ENST00000517732 CNTLNQ9NXG0 1405 aa14.97□□□□□ -0.01
LINCR-0001-201ENST00000517732 MROH2AA6NES4 1674 aa14.97□□□□□ -0.01
LINCR-0001-201ENST00000517732 IQSEC2Q5JU85 1478 aa14.96□□□□□ -0.01
LINCR-0001-201ENST00000517732 KIDINS220Q9ULH0 1771 aa14.96□□□□□ -0.01
LINCR-0001-201ENST00000517732 CDC42BPAQ5VT25 1732 aa14.96□□□□□ -0.01
LINCR-0001-201ENST00000517732 SUPT6HQ7KZ85 1726 aaKnown RBP14.96□□□□□ -0.01
LINCR-0001-201ENST00000517732 TRAPPC8Q9Y2L5 1435 aa14.96□□□□□ -0.01
LINCR-0001-201ENST00000517732 CCDC18Q5T9S5 1454 aa14.95□□□□□ -0.02
LINCR-0001-201ENST00000517732 SOCS7O14512 581 aa14.95□□□□□ -0.02
LINCR-0001-201ENST00000517732 ILDR2Q71H61 639 aa14.93□□□□□ -0.02
LINCR-0001-201ENST00000517732 LTBP4Q8N2S1 1624 aa14.92□□□□□ -0.02
LINCR-0001-201ENST00000517732 NCOA1Q15788 1441 aa14.92□□□□□ -0.02
LINCR-0001-201ENST00000517732 CAMSAP1Q5T5Y3 1602 aa14.91□□□□□ -0.02
LINCR-0001-201ENST00000517732 NPATQ14207 1427 aa14.89□□□□□ -0.03
LINCR-0001-201ENST00000517732 SAMD9LQ8IVG5 1584 aa14.89□□□□□ -0.03
LINCR-0001-201ENST00000517732 ZNF142P52746 1687 aaPredicted RBP14.88□□□□□ -0.03
LINCR-0001-201ENST00000517732 CLTCQ00610 1675 aaKnown RBP14.88□□□□□ -0.03
LINCR-0001-201ENST00000517732 CASKIN1Q8WXD9 1431 aa14.88□□□□□ -0.03
LINCR-0001-201ENST00000517732 MYO3AQ8NEV4 1616 aa14.87□□□□□ -0.03
LINCR-0001-201ENST00000517732 SYCP2Q9BX26 1530 aa14.87□□□□□ -0.03
LINCR-0001-201ENST00000517732 ZNF777Q9ULD5 760 aaPredicted RBP14.85□□□□□ -0.03
LINCR-0001-201ENST00000517732 FYCO1Q9BQS8 1478 aa14.84□□□□□ -0.03
LINCR-0001-201ENST00000517732 ATP7AQ04656 1500 aa14.84□□□□□ -0.03
LINCR-0001-201ENST00000517732 SPAG9O60271 1321 aaKnown RBP14.84□□□□□ -0.03
LINCR-0001-201ENST00000517732 ZMYM3Q14202 1370 aa14.84□□□□□ -0.03
LINCR-0001-201ENST00000517732 ADGBQ8N7X0 1667 aa14.83□□□□□ -0.04
LINCR-0001-201ENST00000517732 PLEKHH2Q8IVE3 1493 aa14.82□□□□□ -0.04
LINCR-0001-201ENST00000517732 INO80Q9ULG1 1556 aaPredicted RBP14.82□□□□□ -0.04
LINCR-0001-201ENST00000517732 CEP170BQ9Y4F5 1589 aaPredicted RBP14.82□□□□□ -0.04
LINCR-0001-201ENST00000517732 PLA2R1Q13018 1463 aa14.82□□□□□ -0.04
LINCR-0001-201ENST00000517732 PLXNC1O60486 1568 aa14.81□□□□□ -0.04
LINCR-0001-201ENST00000517732 PKD2Q13563 968 aa14.8□□□□□ -0.04
LINCR-0001-201ENST00000517732 A2MP01023 1474 aa14.8□□□□□ -0.04
LINCR-0001-201ENST00000517732 UBAP1LF5GYI3 381 aa14.79□□□□□ -0.04
LINCR-0001-201ENST00000517732 ZNF335Q9H4Z2 1342 aaPredicted RBP14.79□□□□□ -0.04
LINCR-0001-201ENST00000517732 NCKAP5LQ9HCH0 1330 aa14.79□□□□□ -0.04
LINCR-0001-201ENST00000517732 GPATCH8Q9UKJ3 1502 aaKnown RBP14.79□□□□□ -0.04
LINCR-0001-201ENST00000517732 POLR1AO95602 1720 aaPredicted RBP14.78□□□□□ -0.04
LINCR-0001-201ENST00000517732 KIAA1107Q9UPP5 1409 aa14.78□□□□□ -0.04
LINCR-0001-201ENST00000517732 HNRNPMP52272 730 aaKnown RBP eCLIP14.77□□□□□ -0.05
LINCR-0001-201ENST00000517732 TCOF1Q13428 1488 aaKnown RBP14.76□□□□□ -0.05
LINCR-0001-201ENST00000517732 CCNB3Q8WWL7 1395 aa14.76□□□□□ -0.05
LINCR-0001-201ENST00000517732 GGT6Q6P531 493 aa14.76□□□□□ -0.05
LINCR-0001-201ENST00000517732 CFDP1Q9UEE9 299 aaPredicted RBP14.76□□□□□ -0.05
LINCR-0001-201ENST00000517732 PTPRKQ15262 1439 aa14.75□□□□□ -0.05
LINCR-0001-201ENST00000517732 PPP6R1Q9UPN7 881 aa14.75□□□□□ -0.05
LINCR-0001-201ENST00000517732 DNMT1P26358 1616 aaKnown RBP14.73□□□□□ -0.05
LINCR-0001-201ENST00000517732 MTUS2Q5JR59 1369 aa14.73□□□□□ -0.05
LINCR-0001-201ENST00000517732 A2ML1A8K2U0 1454 aa14.72□□□□□ -0.05
LINCR-0001-201ENST00000517732 SCAF1Q9H7N4 1312 aaKnown RBP14.7□□□□□ -0.06
LINCR-0001-201ENST00000517732 CPS1P31327 1500 aa14.7□□□□□ -0.06
LINCR-0001-201ENST00000517732 TIAM1Q13009 1591 aa14.68□□□□□ -0.06
LINCR-0001-201ENST00000517732 EHBP1L1Q8N3D4 1523 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms