RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 HECW1Q76N89 1606 aa16.87■□□□□ 0.29
PCM1-203ENST00000517545 AKNAQ7Z591 1439 aa16.87■□□□□ 0.29
PCM1-203ENST00000517545 SENP3-EIF4A1A0A087X0R7 540 aa16.86■□□□□ 0.29
PCM1-203ENST00000517545 SAMD9Q5K651 1589 aa16.86■□□□□ 0.29
PCM1-203ENST00000517545 ARHGEF11O15085 1522 aa16.84■□□□□ 0.29
PCM1-203ENST00000517545 TDRD9Q8NDG6 1382 aaKnown RBP16.83■□□□□ 0.29
PCM1-203ENST00000517545 GCC2Q8IWJ2 1684 aa16.83■□□□□ 0.29
PCM1-203ENST00000517545 ERCC6Q03468 1493 aa16.83■□□□□ 0.28
PCM1-203ENST00000517545 KIF21AQ7Z4S6 1674 aa16.83■□□□□ 0.28
PCM1-203ENST00000517545 TCOF1Q13428 1488 aaKnown RBP16.82■□□□□ 0.28
PCM1-203ENST00000517545 ARID3CA6NKF2 412 aa16.81■□□□□ 0.28
PCM1-203ENST00000517545 SPATA31E1Q6ZUB1 1445 aa16.8■□□□□ 0.28
PCM1-203ENST00000517545 THOC2Q8NI27 1593 aaKnown RBP16.8■□□□□ 0.28
PCM1-203ENST00000517545 SMG6Q86US8 1419 aaKnown RBP16.79■□□□□ 0.28
PCM1-203ENST00000517545 ANKRD30BQ9BXX2 1392 aa16.79■□□□□ 0.28
PCM1-203ENST00000517545 CCDC136Q96JN2 1154 aa16.79■□□□□ 0.28
PCM1-203ENST00000517545 TEX14Q8IWB6 1497 aa16.77■□□□□ 0.28
PCM1-203ENST00000517545 POLR3GLQ9BT43 218 aa16.77■□□□□ 0.28
PCM1-203ENST00000517545 NUDCQ9Y266 331 aa16.77■□□□□ 0.28
PCM1-203ENST00000517545 RPRD2Q5VT52 1461 aaKnown RBP16.77■□□□□ 0.28
PCM1-203ENST00000517545 URB2Q14146 1524 aaKnown RBP16.76■□□□□ 0.27
PCM1-203ENST00000517545 RNF123Q5XPI4 1314 aa16.75■□□□□ 0.27
PCM1-203ENST00000517545 DHX29Q7Z478 1369 aaKnown RBP16.75■□□□□ 0.27
PCM1-203ENST00000517545 IPO9Q96P70 1041 aaKnown RBP16.74■□□□□ 0.27
PCM1-203ENST00000517545 ANP32AP39687 249 aaKnown RBP16.74■□□□□ 0.27
PCM1-203ENST00000517545 SLC4A1APQ9BWU0 796 aaKnown RBP16.73■□□□□ 0.27
PCM1-203ENST00000517545 GAPVD1Q14C86 1478 aa16.72■□□□□ 0.27
PCM1-203ENST00000517545 CDK13Q14004 1512 aaKnown RBP16.72■□□□□ 0.27
PCM1-203ENST00000517545 ABCA5Q8WWZ7 1642 aa16.7■□□□□ 0.26
PCM1-203ENST00000517545 EPRSP07814 1512 aaKnown RBP16.7■□□□□ 0.26
PCM1-203ENST00000517545 MIA2Q96PC5 1412 aa16.7■□□□□ 0.26
PCM1-203ENST00000517545 ZNF326Q5BKZ1 582 aaKnown RBP16.7■□□□□ 0.26
PCM1-203ENST00000517545 ZNF644Q9H582 1327 aaPredicted RBP16.69■□□□□ 0.26
PCM1-203ENST00000517545 ZBTB47Q9UFB7 747 aaPredicted RBP16.69■□□□□ 0.26
PCM1-203ENST00000517545 DAPK1P53355 1430 aa16.67■□□□□ 0.26
PCM1-203ENST00000517545 POLR1AO95602 1720 aaPredicted RBP16.66■□□□□ 0.26
PCM1-203ENST00000517545 PNISRQ8TF01 805 aaKnown RBP16.66■□□□□ 0.26
PCM1-203ENST00000517545 MRC2Q9UBG0 1479 aa16.66■□□□□ 0.26
PCM1-203ENST00000517545 USP47Q96K76 1375 aa16.66■□□□□ 0.26
PCM1-203ENST00000517545 RTL5Q5HYW3 569 aaPredicted RBP16.66■□□□□ 0.26
PCM1-203ENST00000517545 ABCC5O15440 1437 aa16.65■□□□□ 0.26
PCM1-203ENST00000517545 BCORL1Q5H9F3 1711 aa16.64■□□□□ 0.25
PCM1-203ENST00000517545 ROCK1Q13464 1354 aa16.64■□□□□ 0.25
PCM1-203ENST00000517545 NPM2Q86SE8 214 aaKnown RBP16.63■□□□□ 0.25
PCM1-203ENST00000517545 TMC1Q8TDI8 760 aa16.63■□□□□ 0.25
PCM1-203ENST00000517545 EXOC6Q8TAG9 804 aa16.6■□□□□ 0.25
PCM1-203ENST00000517545 PZPP20742 1482 aa16.59■□□□□ 0.25
PCM1-203ENST00000517545 MBD5Q9P267 1494 aa16.58■□□□□ 0.25
PCM1-203ENST00000517545 WDR62O43379 1518 aa16.58■□□□□ 0.24
PCM1-203ENST00000517545 SALL2Q9Y467 1007 aaPredicted RBP16.57■□□□□ 0.24
PCM1-203ENST00000517545 DNMT1P26358 1616 aaKnown RBP16.57■□□□□ 0.24
PCM1-203ENST00000517545 RRP1P56182 461 aaKnown RBP16.57■□□□□ 0.24
PCM1-203ENST00000517545 LAS1LQ9Y4W2 734 aaKnown RBP16.56■□□□□ 0.24
PCM1-203ENST00000517545 IL27Q8NEV9 243 aa16.56■□□□□ 0.24
PCM1-203ENST00000517545 ANO8Q9HCE9 1232 aaPredicted RBP16.55■□□□□ 0.24
PCM1-203ENST00000517545 IQGAP2Q13576 1575 aa16.54■□□□□ 0.24
PCM1-203ENST00000517545 PKD2Q13563 968 aa16.54■□□□□ 0.24
PCM1-203ENST00000517545 LRPPRCP42704 1394 aaKnown RBP16.53■□□□□ 0.24
PCM1-203ENST00000517545 KDM5CP41229 1560 aa16.53■□□□□ 0.24
PCM1-203ENST00000517545 PDE4AP27815 886 aa16.53■□□□□ 0.24
PCM1-203ENST00000517545 KIAA1107Q9UPP5 1409 aa16.52■□□□□ 0.24
PCM1-203ENST00000517545 ARID4BQ4LE39 1312 aaPredicted RBP16.52■□□□□ 0.23
PCM1-203ENST00000517545 RCAN3Q9UKA8 241 aa16.52■□□□□ 0.23
PCM1-203ENST00000517545 CARD11Q9BXL7 1154 aa16.51■□□□□ 0.23
PCM1-203ENST00000517545 TCERG1O14776 1098 aaKnown RBP16.51■□□□□ 0.23
PCM1-203ENST00000517545 KIF15Q9NS87 1388 aa16.51■□□□□ 0.23
PCM1-203ENST00000517545 RTN4Q9NQC3 1192 aaKnown RBP16.51■□□□□ 0.23
PCM1-203ENST00000517545 NEFMP07197 916 aa16.5■□□□□ 0.23
PCM1-203ENST00000517545 ST20-MTHFSA0A0A6YYL1 179 aa16.5■□□□□ 0.23
PCM1-203ENST00000517545 KIF14Q15058 1648 aa16.49■□□□□ 0.23
PCM1-203ENST00000517545 MYBBP1AQ9BQG0 1328 aaKnown RBP16.49■□□□□ 0.23
PCM1-203ENST00000517545 PRKCSHP14314 528 aaPredicted RBP16.49■□□□□ 0.23
PCM1-203ENST00000517545 SKAP1Q86WV1 359 aa16.49■□□□□ 0.23
PCM1-203ENST00000517545 BACH2Q9BYV9 841 aa16.49■□□□□ 0.23
PCM1-203ENST00000517545 ROCK2O75116 1388 aaKnown RBP16.49■□□□□ 0.23
PCM1-203ENST00000517545 ZNF608Q9ULD9 1512 aaPredicted RBP16.49■□□□□ 0.23
PCM1-203ENST00000517545 ZNF777Q9ULD5 760 aaPredicted RBP16.48■□□□□ 0.23
PCM1-203ENST00000517545 KDM2AQ9Y2K7 1162 aa16.48■□□□□ 0.23
PCM1-203ENST00000517545 BRD4O60885 1362 aaPredicted RBP16.48■□□□□ 0.23
PCM1-203ENST00000517545 CFDP1Q9UEE9 299 aaPredicted RBP16.47■□□□□ 0.23
PCM1-203ENST00000517545 TARBP1Q13395 1621 aaKnown RBP16.46■□□□□ 0.23
PCM1-203ENST00000517545 CDCA7LQ96GN5 454 aa16.46■□□□□ 0.23
PCM1-203ENST00000517545 NUP153P49790 1475 aaKnown RBP16.46■□□□□ 0.23
PCM1-203ENST00000517545 PLIN1O60240 522 aa16.45■□□□□ 0.22
PCM1-203ENST00000517545 RALBP1Q15311 655 aa16.45■□□□□ 0.22
PCM1-203ENST00000517545 CAMSAP2Q08AD1 1489 aa16.45■□□□□ 0.22
PCM1-203ENST00000517545 RALGAPBQ86X10 1494 aa16.45■□□□□ 0.22
PCM1-203ENST00000517545 PRG4Q92954 1404 aaPredicted RBP16.44■□□□□ 0.22
PCM1-203ENST00000517545 UHRF1BP1Q6BDS2 1440 aa16.43■□□□□ 0.22
PCM1-203ENST00000517545 FBLN2P98095 1184 aa16.43■□□□□ 0.22
PCM1-203ENST00000517545 MS4A1P11836 297 aa16.41■□□□□ 0.22
PCM1-203ENST00000517545 PBRM1Q86U86 1689 aa16.41■□□□□ 0.22
PCM1-203ENST00000517545 IFT140Q96RY7 1462 aa16.41■□□□□ 0.22
PCM1-203ENST00000517545 ADAMTS12P58397 1594 aa16.41■□□□□ 0.22
PCM1-203ENST00000517545 DCAF11Q8TEB1 546 aa16.4■□□□□ 0.22
PCM1-203ENST00000517545 USP35Q9P2H5 1018 aa16.4■□□□□ 0.22
PCM1-203ENST00000517545 NLRP13Q86W25 1043 aa16.39■□□□□ 0.22
PCM1-203ENST00000517545 NUP155O75694 1391 aa16.39■□□□□ 0.21
PCM1-203ENST00000517545 DISP1Q96F81 1524 aa16.39■□□□□ 0.21
PCM1-203ENST00000517545 ANKRD50Q9ULJ7 1429 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms