RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 FMN1Q68DA7 1419 aa25.21■■□□□ 1.63
CSGALNACT1-204ENST00000517494 HSPA2P54652 639 aa25.21■■□□□ 1.63
CSGALNACT1-204ENST00000517494 HECW1Q76N89 1606 aa25.21■■□□□ 1.63
CSGALNACT1-204ENST00000517494 MAGI2Q86UL8 1455 aa25.19■■□□□ 1.62
CSGALNACT1-204ENST00000517494 CDK11AQ9UQ88 783 aaPredicted RBP25.18■■□□□ 1.62
CSGALNACT1-204ENST00000517494 EFCAB2Q5VUJ9 269 aa25.17■■□□□ 1.62
CSGALNACT1-204ENST00000517494 SIGLEC1Q9BZZ2 1709 aa25.17■■□□□ 1.62
CSGALNACT1-204ENST00000517494 ARHGAP35Q9NRY4 1499 aa25.16■■□□□ 1.62
CSGALNACT1-204ENST00000517494 MYT1LQ9UL68 1186 aa25.12■■□□□ 1.61
CSGALNACT1-204ENST00000517494 MYO5CQ9NQX4 1742 aa25.11■■□□□ 1.61
CSGALNACT1-204ENST00000517494 KIF14Q15058 1648 aa25.11■■□□□ 1.61
CSGALNACT1-204ENST00000517494 ATP10AO60312 1499 aa25.1■■□□□ 1.61
CSGALNACT1-204ENST00000517494 C9orf84Q5VXU9 1444 aa25.1■■□□□ 1.61
CSGALNACT1-204ENST00000517494 ARHGAP5Q13017 1502 aa25.09■■□□□ 1.61
CSGALNACT1-204ENST00000517494 CLIP1P30622 1438 aa25.09■■□□□ 1.61
CSGALNACT1-204ENST00000517494 FER1L4A9Z1Z3 1794 aa25.08■■□□□ 1.61
CSGALNACT1-204ENST00000517494 TROQ12816 1431 aaPredicted RBP25.08■■□□□ 1.61
CSGALNACT1-204ENST00000517494 CHIC1Q5VXU3 224 aa25.07■■□□□ 1.6
CSGALNACT1-204ENST00000517494 ZNF518AQ6AHZ1 1483 aa25.04■■□□□ 1.6
CSGALNACT1-204ENST00000517494 AFAP1Q8N556 730 aa25.04■■□□□ 1.6
CSGALNACT1-204ENST00000517494 ARHGEF12Q9NZN5 1544 aa25.02■■□□□ 1.6
CSGALNACT1-204ENST00000517494 CEBPAP49715 358 aaPredicted RBP25.02■■□□□ 1.6
CSGALNACT1-204ENST00000517494 KDM5CP41229 1560 aa24.96■■□□□ 1.59
CSGALNACT1-204ENST00000517494 LRRIQ1Q96JM4 1722 aa24.94■■□□□ 1.58
CSGALNACT1-204ENST00000517494 CERKQ8TCT0 537 aa24.93■■□□□ 1.58
CSGALNACT1-204ENST00000517494 DIP2CQ9Y2E4 1556 aa24.92■■□□□ 1.58
CSGALNACT1-204ENST00000517494 PREX1Q8TCU6 1659 aa24.91■■□□□ 1.58
CSGALNACT1-204ENST00000517494 CCDC18Q5T9S5 1454 aa24.9■■□□□ 1.58
CSGALNACT1-204ENST00000517494 CASKIN1Q8WXD9 1431 aa24.9■■□□□ 1.58
CSGALNACT1-204ENST00000517494 ESF1Q9H501 851 aaKnown RBP24.9■■□□□ 1.58
CSGALNACT1-204ENST00000517494 TRAPPC8Q9Y2L5 1435 aa24.89■■□□□ 1.58
CSGALNACT1-204ENST00000517494 UHRF1BP1Q6BDS2 1440 aa24.88■■□□□ 1.57
CSGALNACT1-204ENST00000517494 ABCA6Q8N139 1617 aa24.88■■□□□ 1.57
CSGALNACT1-204ENST00000517494 CDC42BPBQ9Y5S2 1711 aa24.88■■□□□ 1.57
CSGALNACT1-204ENST00000517494 PREX2Q70Z35 1606 aa24.87■■□□□ 1.57
CSGALNACT1-204ENST00000517494 MLH3Q9UHC1 1453 aa24.87■■□□□ 1.57
CSGALNACT1-204ENST00000517494 ABCC1P33527 1531 aa24.86■■□□□ 1.57
CSGALNACT1-204ENST00000517494 ZNF777Q9ULD5 760 aaPredicted RBP24.85■■□□□ 1.57
CSGALNACT1-204ENST00000517494 REREQ9P2R6 1566 aa24.83■■□□□ 1.57
CSGALNACT1-204ENST00000517494 ITSN2Q9NZM3 1697 aa24.81■■□□□ 1.56
CSGALNACT1-204ENST00000517494 DMRT2Q9Y5R5 561 aa24.81■■□□□ 1.56
CSGALNACT1-204ENST00000517494 FYCO1Q9BQS8 1478 aa24.79■■□□□ 1.56
CSGALNACT1-204ENST00000517494 AGLP35573 1532 aa24.77■■□□□ 1.56
CSGALNACT1-204ENST00000517494 C3P01024 1663 aa24.75■■□□□ 1.55
CSGALNACT1-204ENST00000517494 CDC42BPAQ5VT25 1732 aa24.75■■□□□ 1.55
CSGALNACT1-204ENST00000517494 STRCQ7RTU9 1775 aa24.73■■□□□ 1.55
CSGALNACT1-204ENST00000517494 KIDINS220Q9ULH0 1771 aa24.73■■□□□ 1.55
CSGALNACT1-204ENST00000517494 SYCP2Q9BX26 1530 aa24.73■■□□□ 1.55
CSGALNACT1-204ENST00000517494 SPAG9O60271 1321 aaKnown RBP24.72■■□□□ 1.55
CSGALNACT1-204ENST00000517494 HNRNPMP52272 730 aaKnown RBP eCLIP24.72■■□□□ 1.55
CSGALNACT1-204ENST00000517494 SAMD9LQ8IVG5 1584 aa24.71■■□□□ 1.55
CSGALNACT1-204ENST00000517494 CNTLNQ9NXG0 1405 aa24.71■■□□□ 1.55
CSGALNACT1-204ENST00000517494 GPATCH8Q9UKJ3 1502 aaKnown RBP24.7■■□□□ 1.54
CSGALNACT1-204ENST00000517494 SETD1BQ9UPS6 1966 aaKnown RBP24.68■■□□□ 1.54
CSGALNACT1-204ENST00000517494 CFDP1Q9UEE9 299 aaPredicted RBP24.68■■□□□ 1.54
CSGALNACT1-204ENST00000517494 CCNB3Q8WWL7 1395 aa24.67■■□□□ 1.54
CSGALNACT1-204ENST00000517494 PTPRTO14522 1441 aa24.65■■□□□ 1.54
CSGALNACT1-204ENST00000517494 MTUS2Q5JR59 1369 aa24.64■■□□□ 1.53
CSGALNACT1-204ENST00000517494 ATP7AQ04656 1500 aa24.62■■□□□ 1.53
CSGALNACT1-204ENST00000517494 SUPT6HQ7KZ85 1726 aaKnown RBP24.61■■□□□ 1.53
CSGALNACT1-204ENST00000517494 ZMYM3Q14202 1370 aa24.61■■□□□ 1.53
CSGALNACT1-204ENST00000517494 PLEKHH2Q8IVE3 1493 aa24.61■■□□□ 1.53
CSGALNACT1-204ENST00000517494 NCOA1Q15788 1441 aa24.61■■□□□ 1.53
CSGALNACT1-204ENST00000517494 KIAA1107Q9UPP5 1409 aa24.6■■□□□ 1.53
CSGALNACT1-204ENST00000517494 GGT6Q6P531 493 aa24.59■■□□□ 1.53
CSGALNACT1-204ENST00000517494 NPATQ14207 1427 aa24.59■■□□□ 1.53
CSGALNACT1-204ENST00000517494 A2MP01023 1474 aa24.58■■□□□ 1.53
CSGALNACT1-204ENST00000517494 DISP3Q9P2K9 1392 aa24.57■■□□□ 1.52
CSGALNACT1-204ENST00000517494 CAMSAP1Q5T5Y3 1602 aa24.57■■□□□ 1.52
CSGALNACT1-204ENST00000517494 INO80Q9ULG1 1556 aaPredicted RBP24.56■■□□□ 1.52
CSGALNACT1-204ENST00000517494 MROH2AA6NES4 1674 aa24.56■■□□□ 1.52
CSGALNACT1-204ENST00000517494 ZNF644Q9H582 1327 aaPredicted RBP24.54■■□□□ 1.52
CSGALNACT1-204ENST00000517494 NCKAP5LQ9HCH0 1330 aa24.54■■□□□ 1.52
CSGALNACT1-204ENST00000517494 CLTCQ00610 1675 aaKnown RBP24.53■■□□□ 1.52
CSGALNACT1-204ENST00000517494 PLXNC1O60486 1568 aa24.53■■□□□ 1.52
CSGALNACT1-204ENST00000517494 LTBP4Q8N2S1 1624 aa24.52■■□□□ 1.52
CSGALNACT1-204ENST00000517494 TIAM1Q13009 1591 aa24.49■■□□□ 1.51
CSGALNACT1-204ENST00000517494 EHBP1L1Q8N3D4 1523 aa24.48■■□□□ 1.51
CSGALNACT1-204ENST00000517494 MYO3AQ8NEV4 1616 aa24.47■■□□□ 1.51
CSGALNACT1-204ENST00000517494 PTPRKQ15262 1439 aa24.47■■□□□ 1.51
CSGALNACT1-204ENST00000517494 ZNF335Q9H4Z2 1342 aaPredicted RBP24.46■■□□□ 1.51
CSGALNACT1-204ENST00000517494 CEP170BQ9Y4F5 1589 aaPredicted RBP24.45■■□□□ 1.5
CSGALNACT1-204ENST00000517494 ILDR2Q71H61 639 aa24.44■■□□□ 1.5
CSGALNACT1-204ENST00000517494 ADGBQ8N7X0 1667 aa24.43■■□□□ 1.5
CSGALNACT1-204ENST00000517494 IQSEC2Q5JU85 1478 aa24.43■■□□□ 1.5
CSGALNACT1-204ENST00000517494 MBD5Q9P267 1494 aa24.43■■□□□ 1.5
CSGALNACT1-204ENST00000517494 PKD2Q13563 968 aa24.42■■□□□ 1.5
CSGALNACT1-204ENST00000517494 CEP162Q5TB80 1403 aa24.42■■□□□ 1.5
CSGALNACT1-204ENST00000517494 ZNF142P52746 1687 aaPredicted RBP24.41■■□□□ 1.5
CSGALNACT1-204ENST00000517494 PLA2R1Q13018 1463 aa24.41■■□□□ 1.5
CSGALNACT1-204ENST00000517494 PPP6R1Q9UPN7 881 aa24.41■■□□□ 1.5
CSGALNACT1-204ENST00000517494 SPATA31D1Q6ZQQ2 1576 aa24.38■■□□□ 1.49
CSGALNACT1-204ENST00000517494 RTEL1-TNFRSF6BF6WH68 1400 aa24.38■■□□□ 1.49
CSGALNACT1-204ENST00000517494 UBAP1LF5GYI3 381 aa24.38■■□□□ 1.49
CSGALNACT1-204ENST00000517494 KIF3BO15066 747 aa24.38■■□□□ 1.49
CSGALNACT1-204ENST00000517494 DHX29Q7Z478 1369 aaKnown RBP24.38■■□□□ 1.49
CSGALNACT1-204ENST00000517494 TCOF1Q13428 1488 aaKnown RBP24.37■■□□□ 1.49
CSGALNACT1-204ENST00000517494 NCOA2Q15596 1464 aa24.35■■□□□ 1.49
CSGALNACT1-204ENST00000517494 CCDC141Q6ZP82 1450 aa24.35■■□□□ 1.49
CSGALNACT1-204ENST00000517494 A2ML1A8K2U0 1454 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms