RNA–Protein interactions for RNA: ENST00000516460.1

RNU4ATAC12P-201, Transcript of RNA, U4atac small nuclear 12, pseudogene, humanhuman

BASIC

Gene RNU4ATAC12P, Length 113 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC12P-201ENST00000516460 CROCC2H7BZ55 1655 aa13.73□□□□□ -0.21
RNU4ATAC12P-201ENST00000516460 CFDP1Q9UEE9 299 aaPredicted RBP13.73□□□□□ -0.21
RNU4ATAC12P-201ENST00000516460 ABCC5O15440 1437 aa13.73□□□□□ -0.21
RNU4ATAC12P-201ENST00000516460 ZNF316A6NFI3 1004 aaPredicted RBP13.72□□□□□ -0.21
RNU4ATAC12P-201ENST00000516460 TIMELESSQ9UNS1 1208 aa13.71□□□□□ -0.21
RNU4ATAC12P-201ENST00000516460 PREX2Q70Z35 1606 aa13.7□□□□□ -0.22
RNU4ATAC12P-201ENST00000516460 ADGRL2O95490 1459 aa13.68□□□□□ -0.22
RNU4ATAC12P-201ENST00000516460 SHANK2Q9UPX8 1470 aa13.68□□□□□ -0.22
RNU4ATAC12P-201ENST00000516460 ARHGEF5Q12774 1597 aa13.67□□□□□ -0.22
RNU4ATAC12P-201ENST00000516460 RRP7BPQ9NSQ0 103 aa13.67□□□□□ -0.22
RNU4ATAC12P-201ENST00000516460 CHIC2Q9UKJ5 165 aa13.67□□□□□ -0.22
RNU4ATAC12P-201ENST00000516460 KDM5BQ9UGL1 1544 aa13.67□□□□□ -0.22
RNU4ATAC12P-201ENST00000516460 ZCCHC11Q5TAX3 1644 aaKnown RBP13.67□□□□□ -0.22
RNU4ATAC12P-201ENST00000516460 ZNF644Q9H582 1327 aaPredicted RBP13.66□□□□□ -0.22
RNU4ATAC12P-201ENST00000516460 MYO5CQ9NQX4 1742 aa13.65□□□□□ -0.22
RNU4ATAC12P-201ENST00000516460 CDC42BPBQ9Y5S2 1711 aa13.65□□□□□ -0.22
RNU4ATAC12P-201ENST00000516460 KDM6BO15054 1643 aa13.64□□□□□ -0.23
RNU4ATAC12P-201ENST00000516460 ANKRD30AQ9BXX3 1397 aa13.63□□□□□ -0.23
RNU4ATAC12P-201ENST00000516460 DIEXFQ68CQ4 756 aaKnown RBP13.62□□□□□ -0.23
RNU4ATAC12P-201ENST00000516460 ZNF777Q9ULD5 760 aaPredicted RBP13.62□□□□□ -0.23
RNU4ATAC12P-201ENST00000516460 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.62□□□□□ -0.23
RNU4ATAC12P-201ENST00000516460 NCOA1Q15788 1441 aa13.62□□□□□ -0.23
RNU4ATAC12P-201ENST00000516460 TTC37Q6PGP7 1564 aa13.62□□□□□ -0.23
RNU4ATAC12P-201ENST00000516460 PLEKHH2Q8IVE3 1493 aa13.61□□□□□ -0.23
RNU4ATAC12P-201ENST00000516460 RSPH4AQ5TD94 716 aa13.61□□□□□ -0.23
RNU4ATAC12P-201ENST00000516460 SAMD9LQ8IVG5 1584 aa13.61□□□□□ -0.23
RNU4ATAC12P-201ENST00000516460 C9orf84Q5VXU9 1444 aa13.59□□□□□ -0.23
RNU4ATAC12P-201ENST00000516460 OSCARQ8IYS5 282 aa13.59□□□□□ -0.23
RNU4ATAC12P-201ENST00000516460 CCDC141Q6ZP82 1450 aa13.59□□□□□ -0.23
RNU4ATAC12P-201ENST00000516460 ARHGAP5Q13017 1502 aa13.59□□□□□ -0.23
RNU4ATAC12P-201ENST00000516460 TRIM52Q96A61 297 aa13.58□□□□□ -0.24
RNU4ATAC12P-201ENST00000516460 SIN3AQ96ST3 1273 aa13.58□□□□□ -0.24
RNU4ATAC12P-201ENST00000516460 MBD5Q9P267 1494 aa13.58□□□□□ -0.24
RNU4ATAC12P-201ENST00000516460 ARAP3Q8WWN8 1544 aa13.58□□□□□ -0.24
RNU4ATAC12P-201ENST00000516460 MAST1Q9Y2H9 1570 aa13.58□□□□□ -0.24
RNU4ATAC12P-201ENST00000516460 NEUROD1Q13562 356 aa13.57□□□□□ -0.24
RNU4ATAC12P-201ENST00000516460 TONSLQ96HA7 1378 aa13.57□□□□□ -0.24
RNU4ATAC12P-201ENST00000516460 KIAA1107Q9UPP5 1409 aa13.56□□□□□ -0.24
RNU4ATAC12P-201ENST00000516460 TSPY4P0CV99 314 aa13.56□□□□□ -0.24
RNU4ATAC12P-201ENST00000516460 TSPY10P0CW01 314 aa13.56□□□□□ -0.24
RNU4ATAC12P-201ENST00000516460 MPHOSPH9Q99550 1183 aa13.55□□□□□ -0.24
RNU4ATAC12P-201ENST00000516460 PLCH2O75038 1416 aa13.55□□□□□ -0.24
RNU4ATAC12P-201ENST00000516460 DENND4BO75064 1496 aaPredicted RBP13.55□□□□□ -0.24
RNU4ATAC12P-201ENST00000516460 ANKRD50Q9ULJ7 1429 aa13.54□□□□□ -0.24
RNU4ATAC12P-201ENST00000516460 WDR7Q9Y4E6 1490 aa13.54□□□□□ -0.24
RNU4ATAC12P-201ENST00000516460 SYCP2Q9BX26 1530 aa13.54□□□□□ -0.24
RNU4ATAC12P-201ENST00000516460 PPP1R15AO75807 674 aaPredicted RBP13.52□□□□□ -0.25
RNU4ATAC12P-201ENST00000516460 KDM5DQ9BY66 1539 aa13.52□□□□□ -0.25
RNU4ATAC12P-201ENST00000516460 PLXNC1O60486 1568 aa13.52□□□□□ -0.25
RNU4ATAC12P-201ENST00000516460 PZPP20742 1482 aa13.51□□□□□ -0.25
RNU4ATAC12P-201ENST00000516460 ABCA9Q8IUA7 1624 aa13.5□□□□□ -0.25
RNU4ATAC12P-201ENST00000516460 KIF15Q9NS87 1388 aa13.5□□□□□ -0.25
RNU4ATAC12P-201ENST00000516460 HNRNPMP52272 730 aaKnown RBP eCLIP13.5□□□□□ -0.25
RNU4ATAC12P-201ENST00000516460 EFCAB2Q5VUJ9 269 aa13.5□□□□□ -0.25
RNU4ATAC12P-201ENST00000516460 ABCC1P33527 1531 aa13.49□□□□□ -0.25
RNU4ATAC12P-201ENST00000516460 ANKRD30BQ9BXX2 1392 aa13.49□□□□□ -0.25
RNU4ATAC12P-201ENST00000516460 KCNH8Q96L42 1107 aa13.49□□□□□ -0.25
RNU4ATAC12P-201ENST00000516460 SLC4A1APQ9BWU0 796 aaKnown RBP13.48□□□□□ -0.25
RNU4ATAC12P-201ENST00000516460 RPRD2Q5VT52 1461 aaKnown RBP13.47□□□□□ -0.25
RNU4ATAC12P-201ENST00000516460 ASXL2Q76L83 1435 aa13.45□□□□□ -0.26
RNU4ATAC12P-201ENST00000516460 UNC13BO14795 1591 aa13.45□□□□□ -0.26
RNU4ATAC12P-201ENST00000516460 DUOX2Q9NRD8 1548 aa13.44□□□□□ -0.26
RNU4ATAC12P-201ENST00000516460 NPM1P06748 294 aaKnown RBP eCLIP13.44□□□□□ -0.26
RNU4ATAC12P-201ENST00000516460 ARHGEF12Q9NZN5 1544 aa13.44□□□□□ -0.26
RNU4ATAC12P-201ENST00000516460 NUP155O75694 1391 aa13.42□□□□□ -0.26
RNU4ATAC12P-201ENST00000516460 RTEL1-TNFRSF6BF6WH68 1400 aa13.41□□□□□ -0.26
RNU4ATAC12P-201ENST00000516460 ERBINQ96RT1 1412 aa13.41□□□□□ -0.26
RNU4ATAC12P-201ENST00000516460 TEX14Q8IWB6 1497 aa13.41□□□□□ -0.26
RNU4ATAC12P-201ENST00000516460 CFAP74Q9C0B2 1584 aa13.41□□□□□ -0.26
RNU4ATAC12P-201ENST00000516460 FANCAO15360 1455 aa13.4□□□□□ -0.26
RNU4ATAC12P-201ENST00000516460 PKD2Q13563 968 aa13.39□□□□□ -0.27
RNU4ATAC12P-201ENST00000516460 IQGAP3Q86VI3 1631 aa13.39□□□□□ -0.27
RNU4ATAC12P-201ENST00000516460 FAM135AQ9P2D6 1515 aa13.39□□□□□ -0.27
RNU4ATAC12P-201ENST00000516460 FOXD1Q16676 465 aa13.38□□□□□ -0.27
RNU4ATAC12P-201ENST00000516460 ZFYVE16Q7Z3T8 1539 aa13.38□□□□□ -0.27
RNU4ATAC12P-201ENST00000516460 TRAPPC8Q9Y2L5 1435 aa13.38□□□□□ -0.27
RNU4ATAC12P-201ENST00000516460 MAGI2Q86UL8 1455 aa13.37□□□□□ -0.27
RNU4ATAC12P-201ENST00000516460 INO80Q9ULG1 1556 aaPredicted RBP13.37□□□□□ -0.27
RNU4ATAC12P-201ENST00000516460 L3MBTL2Q969R5 705 aa13.36□□□□□ -0.27
RNU4ATAC12P-201ENST00000516460 SPAG9O60271 1321 aaKnown RBP13.36□□□□□ -0.27
RNU4ATAC12P-201ENST00000516460 ADGRL1O94910 1474 aa13.36□□□□□ -0.27
RNU4ATAC12P-201ENST00000516460 ATP7AQ04656 1500 aa13.34□□□□□ -0.27
RNU4ATAC12P-201ENST00000516460 MIER1Q8N108 512 aa13.34□□□□□ -0.27
RNU4ATAC12P-201ENST00000516460 EIF2AK4Q9P2K8 1649 aaKnown RBP13.32□□□□□ -0.28
RNU4ATAC12P-201ENST00000516460 SCAPERQ9BY12 1400 aa13.32□□□□□ -0.28
RNU4ATAC12P-201ENST00000516460 DEPDC5O75140 1603 aa13.31□□□□□ -0.28
RNU4ATAC12P-201ENST00000516460 CD109Q6YHK3 1445 aa13.3□□□□□ -0.28
RNU4ATAC12P-201ENST00000516460 ZNF518AQ6AHZ1 1483 aa13.29□□□□□ -0.28
RNU4ATAC12P-201ENST00000516460 RIMBP3CA6NJZ7 1639 aa13.29□□□□□ -0.28
RNU4ATAC12P-201ENST00000516460 RIMBP3BA6NNM3 1639 aa13.29□□□□□ -0.28
RNU4ATAC12P-201ENST00000516460 RIMBP3Q9UFD9 1639 aa13.29□□□□□ -0.28
RNU4ATAC12P-201ENST00000516460 CENPBP07199 599 aaPredicted RBP13.29□□□□□ -0.28
RNU4ATAC12P-201ENST00000516460 ATP10AO60312 1499 aa13.29□□□□□ -0.28
RNU4ATAC12P-201ENST00000516460 NEO1Q92859 1461 aa13.29□□□□□ -0.28
RNU4ATAC12P-201ENST00000516460 EIF4G2P78344 907 aaKnown RBP eCLIP13.28□□□□□ -0.28
RNU4ATAC12P-201ENST00000516460 AFAP1Q8N556 730 aa13.28□□□□□ -0.28
RNU4ATAC12P-201ENST00000516460 UHRF1BP1Q6BDS2 1440 aa13.28□□□□□ -0.28
RNU4ATAC12P-201ENST00000516460 GLI2P10070 1586 aa13.27□□□□□ -0.29
RNU4ATAC12P-201ENST00000516460 KDM5CP41229 1560 aa13.27□□□□□ -0.29
RNU4ATAC12P-201ENST00000516460 CCDC144AA2RUR9 1427 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms