RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 NAIPQ13075 1403 aa29.73■■■□□ 2.35
TRIO-223ENST00000515710 ZNF777Q9ULD5 760 aaPredicted RBP29.71■■■□□ 2.35
TRIO-223ENST00000515710 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.7■■■□□ 2.35
TRIO-223ENST00000515710 ROCK1Q13464 1354 aa29.7■■■□□ 2.34
TRIO-223ENST00000515710 CHIC2Q9UKJ5 165 aa29.69■■■□□ 2.34
TRIO-223ENST00000515710 PREX2Q70Z35 1606 aa29.67■■■□□ 2.34
TRIO-223ENST00000515710 KCNH8Q96L42 1107 aa29.66■■■□□ 2.34
TRIO-223ENST00000515710 TTC37Q6PGP7 1564 aa29.64■■■□□ 2.34
TRIO-223ENST00000515710 RRP7BPQ9NSQ0 103 aa29.63■■■□□ 2.33
TRIO-223ENST00000515710 GCC2Q8IWJ2 1684 aa29.63■■■□□ 2.33
TRIO-223ENST00000515710 CDC42BPBQ9Y5S2 1711 aa29.62■■■□□ 2.33
TRIO-223ENST00000515710 WDR7Q9Y4E6 1490 aa29.62■■■□□ 2.33
TRIO-223ENST00000515710 NPM1P06748 294 aaKnown RBP eCLIP29.61■■■□□ 2.33
TRIO-223ENST00000515710 ACIN1Q9UKV3 1341 aaKnown RBP29.59■■■□□ 2.33
TRIO-223ENST00000515710 MYO5CQ9NQX4 1742 aa29.58■■■□□ 2.33
TRIO-223ENST00000515710 RSPH4AQ5TD94 716 aa29.57■■■□□ 2.32
TRIO-223ENST00000515710 PLCH2O75038 1416 aa29.57■■■□□ 2.32
TRIO-223ENST00000515710 ARHGAP5Q13017 1502 aa29.56■■■□□ 2.32
TRIO-223ENST00000515710 CROCC2H7BZ55 1655 aa29.55■■■□□ 2.32
TRIO-223ENST00000515710 ARHGEF5Q12774 1597 aa29.55■■■□□ 2.32
TRIO-223ENST00000515710 SAMD9LQ8IVG5 1584 aa29.54■■■□□ 2.32
TRIO-223ENST00000515710 ADGRL2O95490 1459 aa29.54■■■□□ 2.32
TRIO-223ENST00000515710 SHANK2Q9UPX8 1470 aa29.54■■■□□ 2.32
TRIO-223ENST00000515710 ASXL2Q76L83 1435 aa29.53■■■□□ 2.32
TRIO-223ENST00000515710 PLEKHH2Q8IVE3 1493 aa29.52■■■□□ 2.32
TRIO-223ENST00000515710 ADGBQ8N7X0 1667 aa29.51■■■□□ 2.32
TRIO-223ENST00000515710 MBD5Q9P267 1494 aa29.51■■■□□ 2.32
TRIO-223ENST00000515710 MAPKBP1O60336 1514 aa29.51■■■□□ 2.31
TRIO-223ENST00000515710 NCOA1Q15788 1441 aa29.51■■■□□ 2.31
TRIO-223ENST00000515710 TSPY4P0CV99 314 aa29.5■■■□□ 2.31
TRIO-223ENST00000515710 TSPY10P0CW01 314 aa29.5■■■□□ 2.31
TRIO-223ENST00000515710 HNRNPMP52272 730 aaKnown RBP eCLIP29.49■■■□□ 2.311e-6■□□□□ 10.8
TRIO-223ENST00000515710 EFCAB2Q5VUJ9 269 aa29.49■■■□□ 2.31
TRIO-223ENST00000515710 ANKRD30AQ9BXX3 1397 aa29.49■■■□□ 2.31
TRIO-223ENST00000515710 ARAP3Q8WWN8 1544 aa29.49■■■□□ 2.31
TRIO-223ENST00000515710 KIAA1107Q9UPP5 1409 aa29.48■■■□□ 2.31
TRIO-223ENST00000515710 CCDC141Q6ZP82 1450 aa29.46■■■□□ 2.31
TRIO-223ENST00000515710 C9orf84Q5VXU9 1444 aa29.45■■■□□ 2.31
TRIO-223ENST00000515710 ABCA9Q8IUA7 1624 aa29.44■■■□□ 2.3
TRIO-223ENST00000515710 KDM6BO15054 1643 aa29.43■■■□□ 2.3
TRIO-223ENST00000515710 RIMBP3CA6NJZ7 1639 aa29.42■■■□□ 2.3
TRIO-223ENST00000515710 RIMBP3BA6NNM3 1639 aa29.42■■■□□ 2.3
TRIO-223ENST00000515710 RIMBP3Q9UFD9 1639 aa29.42■■■□□ 2.3
TRIO-223ENST00000515710 SYCP2Q9BX26 1530 aa29.4■■■□□ 2.3
TRIO-223ENST00000515710 TRIM52Q96A61 297 aa29.38■■■□□ 2.29
TRIO-223ENST00000515710 CYB5RLQ6IPT4 315 aa29.36■■■□□ 2.29
TRIO-223ENST00000515710 MAST1Q9Y2H9 1570 aa29.36■■■□□ 2.29
TRIO-223ENST00000515710 ABCC1P33527 1531 aa29.33■■■□□ 2.29
TRIO-223ENST00000515710 ARHGEF12Q9NZN5 1544 aa29.32■■■□□ 2.28
TRIO-223ENST00000515710 ANKRD50Q9ULJ7 1429 aa29.31■■■□□ 2.28
TRIO-223ENST00000515710 TIMELESSQ9UNS1 1208 aa29.29■■■□□ 2.28
TRIO-223ENST00000515710 FANCAO15360 1455 aa29.28■■■□□ 2.28
TRIO-223ENST00000515710 MPHOSPH9Q99550 1183 aa29.28■■■□□ 2.28
TRIO-223ENST00000515710 KIF15Q9NS87 1388 aa29.28■■■□□ 2.28
TRIO-223ENST00000515710 SIN3AQ96ST3 1273 aa29.25■■■□□ 2.27
TRIO-223ENST00000515710 DENND4BO75064 1496 aaPredicted RBP29.22■■■□□ 2.27
TRIO-223ENST00000515710 CD109Q6YHK3 1445 aa29.22■■■□□ 2.27
TRIO-223ENST00000515710 TRAPPC8Q9Y2L5 1435 aa29.22■■■□□ 2.27
TRIO-223ENST00000515710 NEUROD1Q13562 356 aa29.21■■■□□ 2.27
TRIO-223ENST00000515710 PLXNC1O60486 1568 aa29.21■■■□□ 2.27
TRIO-223ENST00000515710 RTEL1-TNFRSF6BF6WH68 1400 aa29.17■■■□□ 2.26
TRIO-223ENST00000515710 SLC4A1APQ9BWU0 796 aaKnown RBP29.16■■■□□ 2.26
TRIO-223ENST00000515710 ADGRL1O94910 1474 aa29.16■■■□□ 2.26
TRIO-223ENST00000515710 PZPP20742 1482 aa29.15■■■□□ 2.26
TRIO-223ENST00000515710 CFAP74Q9C0B2 1584 aa29.15■■■□□ 2.26
TRIO-223ENST00000515710 SCAPERQ9BY12 1400 aa29.14■■■□□ 2.26
TRIO-223ENST00000515710 SPAG9O60271 1321 aaKnown RBP29.13■■■□□ 2.25
TRIO-223ENST00000515710 DUOX2Q9NRD8 1548 aa29.12■■■□□ 2.25
TRIO-223ENST00000515710 KDM5DQ9BY66 1539 aa29.11■■■□□ 2.25
TRIO-223ENST00000515710 AFAP1Q8N556 730 aa29.11■■■□□ 2.25
TRIO-223ENST00000515710 GLI2P10070 1586 aa29.09■■■□□ 2.25
TRIO-223ENST00000515710 NUP155O75694 1391 aa29.08■■■□□ 2.25
TRIO-223ENST00000515710 ZNF316A6NFI3 1004 aaPredicted RBP29.08■■■□□ 2.25
TRIO-223ENST00000515710 ERBINQ96RT1 1412 aa29.07■■■□□ 2.24
TRIO-223ENST00000515710 TONSLQ96HA7 1378 aa29.06■■■□□ 2.24
TRIO-223ENST00000515710 ANKRD30BQ9BXX2 1392 aa29.06■■■□□ 2.24
TRIO-223ENST00000515710 ZFYVE16Q7Z3T8 1539 aa29.05■■■□□ 2.24
TRIO-223ENST00000515710 NEO1Q92859 1461 aa29.04■■■□□ 2.24
TRIO-223ENST00000515710 MAP3K4Q9Y6R4 1608 aa29.02■■■□□ 2.24
TRIO-223ENST00000515710 FOXD1Q16676 465 aa29.02■■■□□ 2.24
TRIO-223ENST00000515710 INO80Q9ULG1 1556 aaPredicted RBP29.01■■■□□ 2.23
TRIO-223ENST00000515710 PPP1R15AO75807 674 aaPredicted RBP29.01■■■□□ 2.23
TRIO-223ENST00000515710 ATP7AQ04656 1500 aa29.01■■■□□ 2.23
TRIO-223ENST00000515710 ZNF518AQ6AHZ1 1483 aa29■■■□□ 2.23
TRIO-223ENST00000515710 PKD2Q13563 968 aa29■■■□□ 2.23
TRIO-223ENST00000515710 UNC13BO14795 1591 aa29■■■□□ 2.23
TRIO-223ENST00000515710 POGZQ7Z3K3 1410 aa28.95■■■□□ 2.22
TRIO-223ENST00000515710 DIP2BQ9P265 1576 aa28.95■■■□□ 2.22
TRIO-223ENST00000515710 FAM69CQ0P6D2 419 aa28.94■■■□□ 2.22
TRIO-223ENST00000515710 MYT1LQ9UL68 1186 aa28.93■■■□□ 2.22
TRIO-223ENST00000515710 RPRD2Q5VT52 1461 aaKnown RBP28.93■■■□□ 2.22
TRIO-223ENST00000515710 FAM135AQ9P2D6 1515 aa28.93■■■□□ 2.22
TRIO-223ENST00000515710 MAGI2Q86UL8 1455 aa28.91■■■□□ 2.22
TRIO-223ENST00000515710 KDM5CP41229 1560 aa28.91■■■□□ 2.22
TRIO-223ENST00000515710 DHX29Q7Z478 1369 aaKnown RBP28.89■■■□□ 2.22
TRIO-223ENST00000515710 MLH3Q9UHC1 1453 aa28.89■■■□□ 2.22
TRIO-223ENST00000515710 IQGAP3Q86VI3 1631 aa28.88■■■□□ 2.21
TRIO-223ENST00000515710 KIDINS220Q9ULH0 1771 aa28.87■■■□□ 2.21
TRIO-223ENST00000515710 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.86■■■□□ 2.211e-6■■■□□ 18.5
TRIO-223ENST00000515710 EIF2AK4Q9P2K8 1649 aaKnown RBP28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms