RNA–Protein interactions for RNA: ENST00000515564.5

GATB-212, Transcript of glutamyl-tRNA amidotransferase subunit B, humanhuman

TSL 2

Gene GATB, Length 6,552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATB-212ENST00000515564 CHMP4BQ9H444 224 aaKnown RBP10.75□□□□□ -0.69
GATB-212ENST00000515564 WASHC2CQ9Y4E1 1318 aa10.75□□□□□ -0.69
GATB-212ENST00000515564 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.74□□□□□ -0.69
GATB-212ENST00000515564 NUTM2FA1L443 756 aa10.73□□□□□ -0.69
GATB-212ENST00000515564 GOLGA6L22H0YM25 854 aa10.73□□□□□ -0.69
GATB-212ENST00000515564 OSCARQ8IYS5 282 aa10.73□□□□□ -0.69
GATB-212ENST00000515564 EIF5BO60841 1220 aaKnown RBP10.73□□□□□ -0.69
GATB-212ENST00000515564 SIN3AQ96ST3 1273 aa10.73□□□□□ -0.69
GATB-212ENST00000515564 EVA1CP58658 441 aa10.73□□□□□ -0.69
GATB-212ENST00000515564 NBR1Q14596 966 aa10.72□□□□□ -0.69
GATB-212ENST00000515564 PKD2Q13563 968 aa10.71□□□□□ -0.7
GATB-212ENST00000515564 MS4A1P11836 297 aa10.71□□□□□ -0.7
GATB-212ENST00000515564 CHMP3Q9Y3E7 222 aa10.7□□□□□ -0.7
GATB-212ENST00000515564 LTV1Q96GA3 475 aaPredicted RBP10.7□□□□□ -0.7
GATB-212ENST00000515564 GTF2E1P29083 439 aaPredicted RBP10.7□□□□□ -0.7
GATB-212ENST00000515564 HNRNPMP52272 730 aaKnown RBP eCLIP10.7□□□□□ -0.7
GATB-212ENST00000515564 TAF7LQ5H9L4 462 aa10.7□□□□□ -0.7
GATB-212ENST00000515564 SPAG9O60271 1321 aaKnown RBP10.69□□□□□ -0.7
GATB-212ENST00000515564 KLHL34Q8N239 644 aa10.68□□□□□ -0.7
GATB-212ENST00000515564 TNIKQ9UKE5 1360 aa10.68□□□□□ -0.7
GATB-212ENST00000515564 SMARCA2P51531 1590 aa10.68□□□□□ -0.7
GATB-212ENST00000515564 DCAF8L1A6NGE4 600 aa10.68□□□□□ -0.7
GATB-212ENST00000515564 AMPHP49418 695 aa10.68□□□□□ -0.7
GATB-212ENST00000515564 GORABQ5T7V8 394 aa10.67□□□□□ -0.7
GATB-212ENST00000515564 DDRGK1Q96HY6 314 aa10.67□□□□□ -0.7
GATB-212ENST00000515564 FOXD1Q16676 465 aa10.67□□□□□ -0.7
GATB-212ENST00000515564 APBB1O00213 710 aa10.66□□□□□ -0.7
GATB-212ENST00000515564 MIER1Q8N108 512 aa10.66□□□□□ -0.7
GATB-212ENST00000515564 RGS3P49796 1198 aa10.65□□□□□ -0.7
GATB-212ENST00000515564 ARHGAP35Q9NRY4 1499 aa10.65□□□□□ -0.7
GATB-212ENST00000515564 NUP155O75694 1391 aa10.65□□□□□ -0.7
GATB-212ENST00000515564 GNL2Q13823 731 aaKnown RBP10.65□□□□□ -0.7
GATB-212ENST00000515564 JPH4Q96JJ6 628 aa10.65□□□□□ -0.7
GATB-212ENST00000515564 PTMAP06454 111 aaKnown RBP10.65□□□□□ -0.71
GATB-212ENST00000515564 FAM69CQ0P6D2 419 aa10.64□□□□□ -0.71
GATB-212ENST00000515564 U2AF1L5P0DN76 240 aaPredicted RBP10.64□□□□□ -0.71
GATB-212ENST00000515564 U2AF1Q01081 240 aaKnown RBP eCLIP10.64□□□□□ -0.71
GATB-212ENST00000515564 FRAT2O75474 233 aaPredicted RBP10.64□□□□□ -0.71
GATB-212ENST00000515564 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.63□□□□□ -0.71
GATB-212ENST00000515564 ROCK2O75116 1388 aaKnown RBP10.63□□□□□ -0.71
GATB-212ENST00000515564 ANKRD30AQ9BXX3 1397 aa10.63□□□□□ -0.71
GATB-212ENST00000515564 TERF2IPQ9NYB0 399 aa10.63□□□□□ -0.71
GATB-212ENST00000515564 PLCB2Q00722 1185 aa10.62□□□□□ -0.71
GATB-212ENST00000515564 CALD1Q05682 793 aaKnown RBP10.62□□□□□ -0.71
GATB-212ENST00000515564 HSP90AB1P08238 724 aaKnown RBP10.62□□□□□ -0.71
GATB-212ENST00000515564 MCCP23508 829 aa10.61□□□□□ -0.71
GATB-212ENST00000515564 STK31Q9BXU1 1019 aa10.61□□□□□ -0.71
GATB-212ENST00000515564 EIF3AQ14152 1382 aaKnown RBP10.61□□□□□ -0.71
GATB-212ENST00000515564 TRIM44Q96DX7 344 aaPredicted RBP10.61□□□□□ -0.71
GATB-212ENST00000515564 GOLGA6L4A6NEF3 574 aa10.6□□□□□ -0.71
GATB-212ENST00000515564 SYTL4Q96C24 671 aaPredicted RBP10.6□□□□□ -0.71
GATB-212ENST00000515564 CHMP4AQ9BY43 222 aa10.59□□□□□ -0.71
GATB-212ENST00000515564 GOLGA6L6A8MZA4 724 aa10.59□□□□□ -0.71
GATB-212ENST00000515564 KIAA1211Q6ZU35 1233 aa10.58□□□□□ -0.72
GATB-212ENST00000515564 FMN1Q68DA7 1419 aa10.58□□□□□ -0.72
GATB-212ENST00000515564 SUPT16HQ9Y5B9 1047 aaKnown RBP10.58□□□□□ -0.72
GATB-212ENST00000515564 IPO8O15397 1037 aaKnown RBP10.57□□□□□ -0.72
GATB-212ENST00000515564 TRAK1Q9UPV9 953 aa10.57□□□□□ -0.72
GATB-212ENST00000515564 CCDC88BA6NC98 1476 aa10.57□□□□□ -0.72
GATB-212ENST00000515564 C1orf141Q5JVX7 400 aa10.57□□□□□ -0.72
GATB-212ENST00000515564 CADPSQ9ULU8 1353 aa10.57□□□□□ -0.72
GATB-212ENST00000515564 ANP32EQ9BTT0 268 aa10.57□□□□□ -0.72
GATB-212ENST00000515564 KTN1Q86UP2 1357 aaKnown RBP10.57□□□□□ -0.72
GATB-212ENST00000515564 ATF3P18847 181 aa10.56□□□□□ -0.72
GATB-212ENST00000515564 PSME1Q06323 249 aa10.56□□□□□ -0.72
GATB-212ENST00000515564 DNTTIP2Q5QJE6 756 aaKnown RBP10.55□□□□□ -0.72
GATB-212ENST00000515564 RSPH4AQ5TD94 716 aa10.55□□□□□ -0.72
GATB-212ENST00000515564 SLC4A10Q6U841 1118 aa10.55□□□□□ -0.72
GATB-212ENST00000515564 VPS53Q5VIR6 699 aa10.55□□□□□ -0.72
GATB-212ENST00000515564 MPHOSPH9Q99550 1183 aa10.55□□□□□ -0.72
GATB-212ENST00000515564 PTPRGP23470 1445 aa10.55□□□□□ -0.72
GATB-212ENST00000515564 AMER1Q5JTC6 1135 aaPredicted RBP10.55□□□□□ -0.72
GATB-212ENST00000515564 PRM3Q9NNZ6 103 aa10.55□□□□□ -0.72
GATB-212ENST00000515564 GPATCH3Q96I76 525 aa10.54□□□□□ -0.72
GATB-212ENST00000515564 ITPRIPQ8IWB1 547 aa10.54□□□□□ -0.72
GATB-212ENST00000515564 FBXW7Q969H0 707 aa10.54□□□□□ -0.72
GATB-212ENST00000515564 HSPA5P11021 654 aaKnown RBP10.54□□□□□ -0.72
GATB-212ENST00000515564 SETD5Q9C0A6 1442 aa10.53□□□□□ -0.72
GATB-212ENST00000515564 TOMM22Q9NS69 142 aa10.53□□□□□ -0.72
GATB-212ENST00000515564 ABCC8Q09428 1581 aa10.53□□□□□ -0.72
GATB-212ENST00000515564 HDAC5Q9UQL6 1122 aa10.52□□□□□ -0.72
GATB-212ENST00000515564 NGEFQ8N5V2 710 aa10.52□□□□□ -0.73
GATB-212ENST00000515564 TRIM34Q9BYJ4 488 aa10.52□□□□□ -0.73
GATB-212ENST00000515564 CCDC18Q5T9S5 1454 aa10.52□□□□□ -0.73
GATB-212ENST00000515564 TTC5Q8N0Z6 440 aa10.52□□□□□ -0.73
GATB-212ENST00000515564 COG3Q96JB2 828 aa10.51□□□□□ -0.73
GATB-212ENST00000515564 CWC22Q9HCG8 908 aaKnown RBP10.51□□□□□ -0.73
GATB-212ENST00000515564 SF3B2Q13435 895 aaKnown RBP10.51□□□□□ -0.73
GATB-212ENST00000515564 CTDP1Q9Y5B0 961 aaPredicted RBP10.51□□□□□ -0.73
GATB-212ENST00000515564 HSP90B1P14625 803 aaKnown RBP10.5□□□□□ -0.73
GATB-212ENST00000515564 B4GALNT3Q6L9W6 998 aa10.5□□□□□ -0.73
GATB-212ENST00000515564 HSCBQ8IWL3 235 aa10.5□□□□□ -0.73
GATB-212ENST00000515564 FHOD3Q2V2M9 1422 aa10.5□□□□□ -0.73
GATB-212ENST00000515564 VGFO15240 615 aaPredicted RBP10.5□□□□□ -0.73
GATB-212ENST00000515564 NRDCO43847 1150 aa10.5□□□□□ -0.73
GATB-212ENST00000515564 MROH2BQ7Z745 1585 aa10.5□□□□□ -0.73
GATB-212ENST00000515564 RAD21O60216 631 aa10.5□□□□□ -0.73
GATB-212ENST00000515564 LMOD3Q0VAK6 560 aa10.5□□□□□ -0.73
GATB-212ENST00000515564 KANK4Q5T7N3 995 aaPredicted RBP10.49□□□□□ -0.73
GATB-212ENST00000515564 CFAP44Q96MT7 982 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms