RNA–Protein interactions for RNA: ENST00000515170.5

RAPGEF6-214, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 2

Gene RAPGEF6, Length 4,103 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-214ENST00000515170 ERICH3Q5RHP9 1530 aa13.4□□□□□ -0.26
RAPGEF6-214ENST00000515170 LAMC3Q9Y6N6 1575 aa13.39□□□□□ -0.27
RAPGEF6-214ENST00000515170 LRRC9Q6ZRR7 1453 aa13.39□□□□□ -0.27
RAPGEF6-214ENST00000515170 ZBTB7CA1YPR0 619 aa13.39□□□□□ -0.27
RAPGEF6-214ENST00000515170 PPM1GO15355 546 aaPredicted RBP13.38□□□□□ -0.27
RAPGEF6-214ENST00000515170 CC2D1BQ5T0F9 858 aaKnown RBP13.38□□□□□ -0.27
RAPGEF6-214ENST00000515170 KANK1Q14678 1352 aa13.38□□□□□ -0.27
RAPGEF6-214ENST00000515170 ABCA10Q8WWZ4 1543 aa13.38□□□□□ -0.27
RAPGEF6-214ENST00000515170 AFAP1Q8N556 730 aa13.37□□□□□ -0.27
RAPGEF6-214ENST00000515170 WDR43Q15061 677 aaKnown RBP eCLIP13.37□□□□□ -0.27
RAPGEF6-214ENST00000515170 POGKQ9P215 609 aa13.37□□□□□ -0.27
RAPGEF6-214ENST00000515170 FGD6Q6ZV73 1430 aa13.37□□□□□ -0.27
RAPGEF6-214ENST00000515170 CASKIN1Q8WXD9 1431 aa13.35□□□□□ -0.27
RAPGEF6-214ENST00000515170 WASHC2CQ9Y4E1 1318 aa13.35□□□□□ -0.27
RAPGEF6-214ENST00000515170 FAM69CQ0P6D2 419 aa13.34□□□□□ -0.27
RAPGEF6-214ENST00000515170 KNSTRNQ9Y448 316 aa13.34□□□□□ -0.27
RAPGEF6-214ENST00000515170 NCOA2Q15596 1464 aa13.34□□□□□ -0.27
RAPGEF6-214ENST00000515170 MYOM3Q5VTT5 1437 aa13.33□□□□□ -0.28
RAPGEF6-214ENST00000515170 DAXXQ9UER7 740 aaPredicted RBP13.32□□□□□ -0.28
RAPGEF6-214ENST00000515170 NEUROD2Q15784 382 aa13.32□□□□□ -0.28
RAPGEF6-214ENST00000515170 SOX12O15370 315 aa13.31□□□□□ -0.28
RAPGEF6-214ENST00000515170 TIMELESSQ9UNS1 1208 aa13.3□□□□□ -0.28
RAPGEF6-214ENST00000515170 RSPH4AQ5TD94 716 aa13.3□□□□□ -0.28
RAPGEF6-214ENST00000515170 LMOD2Q6P5Q4 547 aa13.29□□□□□ -0.28
RAPGEF6-214ENST00000515170 CDK13Q14004 1512 aaKnown RBP13.28□□□□□ -0.28
RAPGEF6-214ENST00000515170 SRPK2P78362 688 aaKnown RBP13.27□□□□□ -0.28
RAPGEF6-214ENST00000515170 ROCK2O75116 1388 aaKnown RBP13.27□□□□□ -0.29
RAPGEF6-214ENST00000515170 PLB1Q6P1J6 1458 aa13.26□□□□□ -0.29
RAPGEF6-214ENST00000515170 TMF1P82094 1093 aa13.26□□□□□ -0.29
RAPGEF6-214ENST00000515170 FYCO1Q9BQS8 1478 aa13.25□□□□□ -0.29
RAPGEF6-214ENST00000515170 KIF15Q9NS87 1388 aa13.25□□□□□ -0.29
RAPGEF6-214ENST00000515170 CDCA8Q53HL2 280 aa13.24□□□□□ -0.29
RAPGEF6-214ENST00000515170 KIAA0586Q9BVV6 1533 aa13.24□□□□□ -0.29
RAPGEF6-214ENST00000515170 NUTM2FA1L443 756 aa13.24□□□□□ -0.29
RAPGEF6-214ENST00000515170 ST20-MTHFSA0A0A6YYL1 179 aa13.24□□□□□ -0.29
RAPGEF6-214ENST00000515170 TRAK1Q9UPV9 953 aa13.23□□□□□ -0.29
RAPGEF6-214ENST00000515170 SYNJ2O15056 1496 aa13.22□□□□□ -0.29
RAPGEF6-214ENST00000515170 A0A0G2JS52 829 aa13.22□□□□□ -0.29
RAPGEF6-214ENST00000515170 RAPGEF3O95398 923 aa13.22□□□□□ -0.29
RAPGEF6-214ENST00000515170 SUPT16HQ9Y5B9 1047 aaKnown RBP13.21□□□□□ -0.29
RAPGEF6-214ENST00000515170 GRIN2AQ12879 1464 aa13.21□□□□□ -0.29
RAPGEF6-214ENST00000515170 BIVM-ERCC5R4GMW8 1640 aa13.2□□□□□ -0.3
RAPGEF6-214ENST00000515170 CCDC144AA2RUR9 1427 aa13.19□□□□□ -0.3
RAPGEF6-214ENST00000515170 EFCAB5A4FU69 1503 aa13.19□□□□□ -0.3
RAPGEF6-214ENST00000515170 ANKRD50Q9ULJ7 1429 aa13.19□□□□□ -0.3
RAPGEF6-214ENST00000515170 IQGAP2Q13576 1575 aa13.19□□□□□ -0.3
RAPGEF6-214ENST00000515170 U2SURPO15042 1029 aaKnown RBP13.19□□□□□ -0.3
RAPGEF6-214ENST00000515170 TIAM1Q13009 1591 aa13.18□□□□□ -0.3
RAPGEF6-214ENST00000515170 RRBP1Q9P2E9 1410 aaKnown RBP13.18□□□□□ -0.3
RAPGEF6-214ENST00000515170 NPM2Q86SE8 214 aaKnown RBP13.18□□□□□ -0.3
RAPGEF6-214ENST00000515170 EPRSP07814 1512 aaKnown RBP13.17□□□□□ -0.3
RAPGEF6-214ENST00000515170 ARHGAP5Q13017 1502 aa13.17□□□□□ -0.3
RAPGEF6-214ENST00000515170 ZBTB47Q9UFB7 747 aaPredicted RBP13.17□□□□□ -0.3
RAPGEF6-214ENST00000515170 PCF11O94913 1555 aaKnown RBP13.17□□□□□ -0.3
RAPGEF6-214ENST00000515170 CCDC136Q96JN2 1154 aa13.17□□□□□ -0.3
RAPGEF6-214ENST00000515170 TROQ12816 1431 aaPredicted RBP13.17□□□□□ -0.3
RAPGEF6-214ENST00000515170 LAS1LQ9Y4W2 734 aaKnown RBP13.14□□□□□ -0.31
RAPGEF6-214ENST00000515170 CFAP53Q96M91 514 aa13.14□□□□□ -0.31
RAPGEF6-214ENST00000515170 SCAPERQ9BY12 1400 aa13.14□□□□□ -0.31
RAPGEF6-214ENST00000515170 ARHGEF11O15085 1522 aa13.13□□□□□ -0.31
RAPGEF6-214ENST00000515170 UACAQ9BZF9 1416 aa13.13□□□□□ -0.31
RAPGEF6-214ENST00000515170 MORC1Q86VD1 984 aa13.12□□□□□ -0.31
RAPGEF6-214ENST00000515170 HAP1P54257 671 aaPredicted RBP13.12□□□□□ -0.31
RAPGEF6-214ENST00000515170 MAGI1Q96QZ7 1491 aaPredicted RBP13.12□□□□□ -0.31
RAPGEF6-214ENST00000515170 HDGFP51858 240 aaKnown RBP13.1□□□□□ -0.31
RAPGEF6-214ENST00000515170 CUL7Q14999 1698 aa13.1□□□□□ -0.31
RAPGEF6-214ENST00000515170 TMEM132EQ6IEE7 984 aa13.1□□□□□ -0.31
RAPGEF6-214ENST00000515170 PAK3O75914 559 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF6-214ENST00000515170 C9orf84Q5VXU9 1444 aa13.08□□□□□ -0.31
RAPGEF6-214ENST00000515170 KIF21AQ7Z4S6 1674 aa13.08□□□□□ -0.31
RAPGEF6-214ENST00000515170 EHBP1L1Q8N3D4 1523 aa13.08□□□□□ -0.32
RAPGEF6-214ENST00000515170 USP47Q96K76 1375 aa13.08□□□□□ -0.32
RAPGEF6-214ENST00000515170 HECW1Q76N89 1606 aa13.07□□□□□ -0.32
RAPGEF6-214ENST00000515170 MINK1Q8N4C8 1332 aaPredicted RBP13.07□□□□□ -0.32
RAPGEF6-214ENST00000515170 NBPF1Q3BBV0 1214 aa13.07□□□□□ -0.32
RAPGEF6-214ENST00000515170 PANK3Q9H999 370 aa13.07□□□□□ -0.32
RAPGEF6-214ENST00000515170 NBPF8Q3BBV2 869 aa13.06□□□□□ -0.32
RAPGEF6-214ENST00000515170 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.06□□□□□ -0.321e-6■■■■□ 23
RAPGEF6-214ENST00000515170 MAPK8IP3Q9UPT6 1336 aa13.05□□□□□ -0.32
RAPGEF6-214ENST00000515170 FRAT1Q92837 279 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF6-214ENST00000515170 DAPK1P53355 1430 aa13.05□□□□□ -0.32
RAPGEF6-214ENST00000515170 KTN1Q86UP2 1357 aaKnown RBP13.04□□□□□ -0.32
RAPGEF6-214ENST00000515170 CFAP70Q5T0N1 1121 aa13.04□□□□□ -0.32
RAPGEF6-214ENST00000515170 NUDCQ9Y266 331 aa13.04□□□□□ -0.32
RAPGEF6-214ENST00000515170 NAIPQ13075 1403 aa13.04□□□□□ -0.32
RAPGEF6-214ENST00000515170 MIA2Q96PC5 1412 aa13.04□□□□□ -0.32
RAPGEF6-214ENST00000515170 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF6-214ENST00000515170 EID1Q9Y6B2 187 aa13.03□□□□□ -0.32
RAPGEF6-214ENST00000515170 HFM1A2PYH4 1435 aa13.03□□□□□ -0.32
RAPGEF6-214ENST00000515170 CCER2I3L3R5 266 aa13.03□□□□□ -0.32
RAPGEF6-214ENST00000515170 CCDC146Q8IYE0 955 aa13.03□□□□□ -0.32
RAPGEF6-214ENST00000515170 VGFO15240 615 aaPredicted RBP13.02□□□□□ -0.32
RAPGEF6-214ENST00000515170 U2AF1L5P0DN76 240 aaPredicted RBP13.02□□□□□ -0.32
RAPGEF6-214ENST00000515170 U2AF1Q01081 240 aaKnown RBP eCLIP13.02□□□□□ -0.32
RAPGEF6-214ENST00000515170 HDGFL2Q7Z4V5 671 aaPredicted RBP13.02□□□□□ -0.33
RAPGEF6-214ENST00000515170 THOC2Q8NI27 1593 aaKnown RBP13□□□□□ -0.33
RAPGEF6-214ENST00000515170 B4GALNT3Q6L9W6 998 aa13□□□□□ -0.33
RAPGEF6-214ENST00000515170 SUPT6HQ7KZ85 1726 aaKnown RBP12.99□□□□□ -0.33
RAPGEF6-214ENST00000515170 KIF7Q2M1P5 1343 aa12.99□□□□□ -0.33
RAPGEF6-214ENST00000515170 ARXQ96QS3 562 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms