RNA–Protein interactions for RNA: ENST00000514962.5

CALCOCO2-224, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 765 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-224ENST00000514962 DCBLD2Q96PD2 775 aa8.9□□□□□ -0.98
CALCOCO2-224ENST00000514962 PPP1R15AO75807 674 aaPredicted RBP8.89□□□□□ -0.99
CALCOCO2-224ENST00000514962 KDM2AQ9Y2K7 1162 aa8.89□□□□□ -0.99
CALCOCO2-224ENST00000514962 CCNB3Q8WWL7 1395 aa8.88□□□□□ -0.99
CALCOCO2-224ENST00000514962 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.88□□□□□ -0.99
CALCOCO2-224ENST00000514962 CCDC61Q9Y6R9 512 aa8.88□□□□□ -0.99
CALCOCO2-224ENST00000514962 MAP3K1Q13233 1512 aa8.87□□□□□ -0.99
CALCOCO2-224ENST00000514962 NUBP1P53384 320 aa8.87□□□□□ -0.99
CALCOCO2-224ENST00000514962 KCNH8Q96L42 1107 aa8.87□□□□□ -0.99
CALCOCO2-224ENST00000514962 DEKP35659 375 aaKnown RBP8.86□□□□□ -0.99
CALCOCO2-224ENST00000514962 PKD2Q13563 968 aa8.86□□□□□ -0.99
CALCOCO2-224ENST00000514962 NBR1Q14596 966 aa8.86□□□□□ -0.99
CALCOCO2-224ENST00000514962 WDR97A6NE52 1622 aa8.85□□□□□ -0.99
CALCOCO2-224ENST00000514962 TOP2BQ02880 1626 aa8.85□□□□□ -0.99
CALCOCO2-224ENST00000514962 BIVM-ERCC5R4GMW8 1640 aa8.85□□□□□ -0.99
CALCOCO2-224ENST00000514962 ANP32CO43423 234 aa8.85□□□□□ -0.99
CALCOCO2-224ENST00000514962 GALR2O43603 387 aaPredicted RBP8.85□□□□□ -0.99
CALCOCO2-224ENST00000514962 DCAF8Q5TAQ9 597 aa8.85□□□□□ -0.99
CALCOCO2-224ENST00000514962 PRXQ9BXM0 1461 aa8.84□□□□□ -0.99
CALCOCO2-224ENST00000514962 SETD5Q9C0A6 1442 aa8.83□□□□□ -1
CALCOCO2-224ENST00000514962 GSE1Q14687 1217 aa8.83□□□□□ -1
CALCOCO2-224ENST00000514962 RAB3GAP2Q9H2M9 1393 aa8.83□□□□□ -1
CALCOCO2-224ENST00000514962 DDX10Q13206 875 aaKnown RBP8.82□□□□□ -1
CALCOCO2-224ENST00000514962 MS4A3Q96HJ5 214 aa8.82□□□□□ -1
CALCOCO2-224ENST00000514962 CIZ1Q9ULV3 898 aaPredicted RBP8.82□□□□□ -1
CALCOCO2-224ENST00000514962 ITGAEP38570 1179 aa8.81□□□□□ -1
CALCOCO2-224ENST00000514962 KIF12Q96FN5 646 aa8.81□□□□□ -1
CALCOCO2-224ENST00000514962 PPP4R2Q9NY27 417 aa8.81□□□□□ -1
CALCOCO2-224ENST00000514962 ECM2O94769 699 aaPredicted RBP8.8□□□□□ -1
CALCOCO2-224ENST00000514962 KANK4Q5T7N3 995 aaPredicted RBP8.79□□□□□ -1
CALCOCO2-224ENST00000514962 UNC13AQ9UPW8 1703 aa8.79□□□□□ -1
CALCOCO2-224ENST00000514962 TIAM1Q13009 1591 aa8.78□□□□□ -1
CALCOCO2-224ENST00000514962 SGIP1Q9BQI5 828 aa8.78□□□□□ -1
CALCOCO2-224ENST00000514962 PCDHB13Q9Y5F0 798 aa8.78□□□□□ -1
CALCOCO2-224ENST00000514962 MAP3K13O43283 966 aa8.77□□□□□ -1.01
CALCOCO2-224ENST00000514962 NOP58Q9Y2X3 529 aaKnown RBP8.77□□□□□ -1.01
CALCOCO2-224ENST00000514962 TRIM52Q96A61 297 aa8.76□□□□□ -1.01
CALCOCO2-224ENST00000514962 ARHGAP35Q9NRY4 1499 aa8.75□□□□□ -1.01
CALCOCO2-224ENST00000514962 CFAP43Q8NDM7 1665 aa8.75□□□□□ -1.01
CALCOCO2-224ENST00000514962 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.74□□□□□ -1.01
CALCOCO2-224ENST00000514962 FHAD1B1AJZ9 1412 aa8.73□□□□□ -1.01
CALCOCO2-224ENST00000514962 POTEIP0CG38 1075 aa8.73□□□□□ -1.01
CALCOCO2-224ENST00000514962 PYGBP11216 843 aa8.73□□□□□ -1.01
CALCOCO2-224ENST00000514962 PAXIP1Q6ZW49 1069 aaPredicted RBP8.73□□□□□ -1.01
CALCOCO2-224ENST00000514962 BBXQ8WY36 941 aaPredicted RBP8.73□□□□□ -1.01
CALCOCO2-224ENST00000514962 CFAP44Q96MT7 982 aa8.73□□□□□ -1.01
CALCOCO2-224ENST00000514962 EIF5BO60841 1220 aaKnown RBP8.72□□□□□ -1.01
CALCOCO2-224ENST00000514962 LRRC9Q6ZRR7 1453 aa8.71□□□□□ -1.01
CALCOCO2-224ENST00000514962 RGL2O15211 777 aa8.71□□□□□ -1.02
CALCOCO2-224ENST00000514962 TIE1P35590 1138 aa8.71□□□□□ -1.02
CALCOCO2-224ENST00000514962 HNRNPUQ00839 825 aaKnown RBP eCLIP8.7□□□□□ -1.02
CALCOCO2-224ENST00000514962 RTL5Q5HYW3 569 aaPredicted RBP8.7□□□□□ -1.02
CALCOCO2-224ENST00000514962 ASTLQ6HA08 431 aaPredicted RBP8.7□□□□□ -1.02
CALCOCO2-224ENST00000514962 KIF27Q86VH2 1401 aa8.7□□□□□ -1.02
CALCOCO2-224ENST00000514962 NCOA2Q15596 1464 aa8.7□□□□□ -1.02
CALCOCO2-224ENST00000514962 NCAPD3P42695 1498 aa8.69□□□□□ -1.02
CALCOCO2-224ENST00000514962 ATMINO43313 823 aaPredicted RBP8.68□□□□□ -1.02
CALCOCO2-224ENST00000514962 ZNF467Q7Z7K2 595 aaPredicted RBP8.68□□□□□ -1.02
CALCOCO2-224ENST00000514962 IFNL1Q8IU54 200 aa8.68□□□□□ -1.02
CALCOCO2-224ENST00000514962 SLC39A7Q92504 469 aa8.68□□□□□ -1.02
CALCOCO2-224ENST00000514962 TONSLQ96HA7 1378 aa8.68□□□□□ -1.02
CALCOCO2-224ENST00000514962 ANP32AP39687 249 aaKnown RBP8.67□□□□□ -1.02
CALCOCO2-224ENST00000514962 IPO9Q96P70 1041 aaKnown RBP8.67□□□□□ -1.02
CALCOCO2-224ENST00000514962 SIN3AQ96ST3 1273 aa8.67□□□□□ -1.02
CALCOCO2-224ENST00000514962 ANO8Q9HCE9 1232 aaPredicted RBP8.67□□□□□ -1.02
CALCOCO2-224ENST00000514962 ATAD2BQ9ULI0 1458 aa8.67□□□□□ -1.02
CALCOCO2-224ENST00000514962 WASHC2AQ641Q2 1341 aa8.66□□□□□ -1.02
CALCOCO2-224ENST00000514962 ZBED9Q6R2W3 1325 aa8.66□□□□□ -1.02
CALCOCO2-224ENST00000514962 BMP2KQ9NSY1 1161 aaPredicted RBP8.66□□□□□ -1.02
CALCOCO2-224ENST00000514962 USP35Q9P2H5 1018 aa8.66□□□□□ -1.02
CALCOCO2-224ENST00000514962 CNTLNQ9NXG0 1405 aa8.65□□□□□ -1.02
CALCOCO2-224ENST00000514962 C11orf95C9JLR9 678 aaPredicted RBP8.65□□□□□ -1.02
CALCOCO2-224ENST00000514962 CHRM1P11229 460 aaPredicted RBP8.65□□□□□ -1.02
CALCOCO2-224ENST00000514962 LHX8Q68G74 356 aa8.65□□□□□ -1.02
CALCOCO2-224ENST00000514962 UACAQ9BZF9 1416 aa8.64□□□□□ -1.03
CALCOCO2-224ENST00000514962 PHLDB1Q86UU1 1377 aa8.64□□□□□ -1.03
CALCOCO2-224ENST00000514962 C7P10643 843 aa8.64□□□□□ -1.03
CALCOCO2-224ENST00000514962 ATN1P54259 1190 aaPredicted RBP8.64□□□□□ -1.03
CALCOCO2-224ENST00000514962 UBE2Q2Q8WVN8 375 aa8.64□□□□□ -1.03
CALCOCO2-224ENST00000514962 BICRAQ9NZM4 1560 aa8.64□□□□□ -1.03
CALCOCO2-224ENST00000514962 KDM5BQ9UGL1 1544 aa8.64□□□□□ -1.03
CALCOCO2-224ENST00000514962 SMG6Q86US8 1419 aaKnown RBP8.63□□□□□ -1.03
CALCOCO2-224ENST00000514962 ABCA5Q8WWZ7 1642 aa8.63□□□□□ -1.03
CALCOCO2-224ENST00000514962 TTLL13PA6NNM8 815 aa8.63□□□□□ -1.03
CALCOCO2-224ENST00000514962 IRX6P78412 446 aaPredicted RBP8.63□□□□□ -1.03
CALCOCO2-224ENST00000514962 TMEM106CQ9BVX2 250 aa8.63□□□□□ -1.03
CALCOCO2-224ENST00000514962 METRNQ9UJH8 293 aa8.63□□□□□ -1.03
CALCOCO2-224ENST00000514962 TRPC6Q9Y210 931 aa8.63□□□□□ -1.03
CALCOCO2-224ENST00000514962 PCDHB8Q9UN66 801 aa8.62□□□□□ -1.03
CALCOCO2-224ENST00000514962 CUX1P39880 1505 aa8.62□□□□□ -1.03
CALCOCO2-224ENST00000514962 POLR1AO95602 1720 aaPredicted RBP8.62□□□□□ -1.03
CALCOCO2-224ENST00000514962 AQRO60306 1485 aaKnown RBP eCLIP8.62□□□□□ -1.033e-6■■■□□ 17.9
CALCOCO2-224ENST00000514962 CCDC18Q5T9S5 1454 aa8.62□□□□□ -1.03
CALCOCO2-224ENST00000514962 PTPN23Q9H3S7 1636 aa8.62□□□□□ -1.03
CALCOCO2-224ENST00000514962 RNF123Q5XPI4 1314 aa8.61□□□□□ -1.03
CALCOCO2-224ENST00000514962 WASHC2CQ9Y4E1 1318 aa8.61□□□□□ -1.03
CALCOCO2-224ENST00000514962 RNF25Q96BH1 459 aaPredicted RBP8.61□□□□□ -1.03
CALCOCO2-224ENST00000514962 SALL2Q9Y467 1007 aaPredicted RBP8.61□□□□□ -1.03
CALCOCO2-224ENST00000514962 FYCO1Q9BQS8 1478 aa8.6□□□□□ -1.03
CALCOCO2-224ENST00000514962 B4GALNT3Q6L9W6 998 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms