RNA–Protein interactions for RNA: ENST00000514777.1

SMAD5-209, Transcript of SMAD family member 5, humanhuman

TSL 3

Gene SMAD5, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-209ENST00000514777 SCAPERQ9BY12 1400 aa22.08■■□□□ 1.13
SMAD5-209ENST00000514777 PLCH2O75038 1416 aa22.07■■□□□ 1.12
SMAD5-209ENST00000514777 EEA1Q15075 1411 aa22.07■■□□□ 1.12
SMAD5-209ENST00000514777 ARHGEF12Q9NZN5 1544 aa22.04■■□□□ 1.12
SMAD5-209ENST00000514777 ATP10AO60312 1499 aa22.03■■□□□ 1.12
SMAD5-209ENST00000514777 CEBPAP49715 358 aaPredicted RBP22.01■■□□□ 1.11
SMAD5-209ENST00000514777 STRCQ7RTU9 1775 aa21.99■■□□□ 1.11
SMAD5-209ENST00000514777 PREX1Q8TCU6 1659 aa21.99■■□□□ 1.11
SMAD5-209ENST00000514777 MYO5CQ9NQX4 1742 aa21.98■■□□□ 1.11
SMAD5-209ENST00000514777 C9orf84Q5VXU9 1444 aa21.97■■□□□ 1.11
SMAD5-209ENST00000514777 EFCAB2Q5VUJ9 269 aa21.97■■□□□ 1.11
SMAD5-209ENST00000514777 SETD1BQ9UPS6 1966 aaKnown RBP21.96■■□□□ 1.11
SMAD5-209ENST00000514777 KIF14Q15058 1648 aa21.93■■□□□ 1.1
SMAD5-209ENST00000514777 AFAP1Q8N556 730 aa21.92■■□□□ 1.1
SMAD5-209ENST00000514777 ATP1B4Q9UN42 357 aaPredicted RBP21.92■■□□□ 1.1
SMAD5-209ENST00000514777 KDM5CP41229 1560 aa21.89■■□□□ 1.09
SMAD5-209ENST00000514777 ILDR2Q71H61 639 aa21.88■■□□□ 1.09
SMAD5-209ENST00000514777 ZNF518AQ6AHZ1 1483 aa21.88■■□□□ 1.09
SMAD5-209ENST00000514777 LRRIQ1Q96JM4 1722 aa21.87■■□□□ 1.09
SMAD5-209ENST00000514777 ARHGAP35Q9NRY4 1499 aa21.87■■□□□ 1.09
SMAD5-209ENST00000514777 FMN1Q68DA7 1419 aa21.87■■□□□ 1.09
SMAD5-209ENST00000514777 CDK11AQ9UQ88 783 aaPredicted RBP21.86■■□□□ 1.09
SMAD5-209ENST00000514777 DMRT2Q9Y5R5 561 aa21.86■■□□□ 1.09
SMAD5-209ENST00000514777 DIP2CQ9Y2E4 1556 aa21.86■■□□□ 1.09
SMAD5-209ENST00000514777 CDC42BPBQ9Y5S2 1711 aa21.86■■□□□ 1.09
SMAD5-209ENST00000514777 EHMT2Q96KQ7 1210 aa21.85■■□□□ 1.09
SMAD5-209ENST00000514777 ARHGAP5Q13017 1502 aa21.85■■□□□ 1.09
SMAD5-209ENST00000514777 TROQ12816 1431 aaPredicted RBP21.84■■□□□ 1.09
SMAD5-209ENST00000514777 UHRF1BP1Q6BDS2 1440 aa21.84■■□□□ 1.09
SMAD5-209ENST00000514777 C3P01024 1663 aa21.84■■□□□ 1.09
SMAD5-209ENST00000514777 REREQ9P2R6 1566 aa21.82■■□□□ 1.08
SMAD5-209ENST00000514777 ABCA6Q8N139 1617 aa21.82■■□□□ 1.08
SMAD5-209ENST00000514777 UBTFP17480 764 aaKnown RBP21.82■■□□□ 1.08
SMAD5-209ENST00000514777 DISP3Q9P2K9 1392 aa21.81■■□□□ 1.08
SMAD5-209ENST00000514777 MLH3Q9UHC1 1453 aa21.8■■□□□ 1.08
SMAD5-209ENST00000514777 MYT1LQ9UL68 1186 aa21.8■■□□□ 1.08
SMAD5-209ENST00000514777 PTPRTO14522 1441 aa21.79■■□□□ 1.08
SMAD5-209ENST00000514777 TRAPPC8Q9Y2L5 1435 aa21.78■■□□□ 1.08
SMAD5-209ENST00000514777 AGLP35573 1532 aa21.76■■□□□ 1.07
SMAD5-209ENST00000514777 CLIP1P30622 1438 aa21.75■■□□□ 1.07
SMAD5-209ENST00000514777 LTBP4Q8N2S1 1624 aa21.75■■□□□ 1.07
SMAD5-209ENST00000514777 SOCS7O14512 581 aa21.74■■□□□ 1.07
SMAD5-209ENST00000514777 KIDINS220Q9ULH0 1771 aa21.74■■□□□ 1.07
SMAD5-209ENST00000514777 PREX2Q70Z35 1606 aa21.73■■□□□ 1.07
SMAD5-209ENST00000514777 ITSN2Q9NZM3 1697 aa21.73■■□□□ 1.07
SMAD5-209ENST00000514777 ABCC1P33527 1531 aa21.73■■□□□ 1.07
SMAD5-209ENST00000514777 CDC42BPAQ5VT25 1732 aa21.69■■□□□ 1.06
SMAD5-209ENST00000514777 NCOA1Q15788 1441 aa21.68■■□□□ 1.06
SMAD5-209ENST00000514777 ESF1Q9H501 851 aaKnown RBP21.67■■□□□ 1.06
SMAD5-209ENST00000514777 SPATA31D1Q6ZQQ2 1576 aa21.65■■□□□ 1.06
SMAD5-209ENST00000514777 CNTLNQ9NXG0 1405 aa21.64■■□□□ 1.06
SMAD5-209ENST00000514777 IQSEC2Q5JU85 1478 aa21.64■■□□□ 1.05
SMAD5-209ENST00000514777 CASKIN1Q8WXD9 1431 aa21.63■■□□□ 1.05
SMAD5-209ENST00000514777 CAMSAP1Q5T5Y3 1602 aa21.62■■□□□ 1.05
SMAD5-209ENST00000514777 SAMD9LQ8IVG5 1584 aa21.62■■□□□ 1.05
SMAD5-209ENST00000514777 MROH2AA6NES4 1674 aa21.62■■□□□ 1.05
SMAD5-209ENST00000514777 ZMYM3Q14202 1370 aa21.61■■□□□ 1.05
SMAD5-209ENST00000514777 NCKAP5LQ9HCH0 1330 aa21.59■■□□□ 1.05
SMAD5-209ENST00000514777 CCDC18Q5T9S5 1454 aa21.59■■□□□ 1.05
SMAD5-209ENST00000514777 NPATQ14207 1427 aa21.59■■□□□ 1.05
SMAD5-209ENST00000514777 SUPT6HQ7KZ85 1726 aaKnown RBP21.59■■□□□ 1.05
SMAD5-209ENST00000514777 ZNF777Q9ULD5 760 aaPredicted RBP21.57■■□□□ 1.04
SMAD5-209ENST00000514777 HNRNPMP52272 730 aaKnown RBP eCLIP21.56■■□□□ 1.043e-6■■■■■ 28.4
SMAD5-209ENST00000514777 CHIC1Q5VXU3 224 aa21.56■■□□□ 1.04
SMAD5-209ENST00000514777 CLTCQ00610 1675 aaKnown RBP21.55■■□□□ 1.04
SMAD5-209ENST00000514777 SYCP2Q9BX26 1530 aa21.55■■□□□ 1.04
SMAD5-209ENST00000514777 GPATCH8Q9UKJ3 1502 aaKnown RBP21.55■■□□□ 1.04
SMAD5-209ENST00000514777 ZNF335Q9H4Z2 1342 aaPredicted RBP21.55■■□□□ 1.04
SMAD5-209ENST00000514777 SPAG9O60271 1321 aaKnown RBP21.54■■□□□ 1.04
SMAD5-209ENST00000514777 ZNF142P52746 1687 aaPredicted RBP21.51■■□□□ 1.03
SMAD5-209ENST00000514777 PLXNC1O60486 1568 aa21.5■■□□□ 1.03
SMAD5-209ENST00000514777 PTPRKQ15262 1439 aa21.5■■□□□ 1.03
SMAD5-209ENST00000514777 ATP7AQ04656 1500 aa21.5■■□□□ 1.03
SMAD5-209ENST00000514777 MYO3AQ8NEV4 1616 aa21.49■■□□□ 1.03
SMAD5-209ENST00000514777 INO80Q9ULG1 1556 aaPredicted RBP21.48■■□□□ 1.03
SMAD5-209ENST00000514777 PLA2R1Q13018 1463 aa21.48■■□□□ 1.03
SMAD5-209ENST00000514777 FYCO1Q9BQS8 1478 aa21.48■■□□□ 1.03
SMAD5-209ENST00000514777 KIAA1107Q9UPP5 1409 aa21.47■■□□□ 1.03
SMAD5-209ENST00000514777 A2MP01023 1474 aa21.47■■□□□ 1.03
SMAD5-209ENST00000514777 TCOF1Q13428 1488 aaKnown RBP21.47■■□□□ 1.03
SMAD5-209ENST00000514777 UBAP1LF5GYI3 381 aa21.47■■□□□ 1.03
SMAD5-209ENST00000514777 PKD2Q13563 968 aa21.47■■□□□ 1.03
SMAD5-209ENST00000514777 CEP170BQ9Y4F5 1589 aaPredicted RBP21.46■■□□□ 1.03
SMAD5-209ENST00000514777 GGT6Q6P531 493 aa21.46■■□□□ 1.03
SMAD5-209ENST00000514777 CFDP1Q9UEE9 299 aaPredicted RBP21.43■■□□□ 1.02
SMAD5-209ENST00000514777 PLEKHH2Q8IVE3 1493 aa21.41■■□□□ 1.02
SMAD5-209ENST00000514777 ADGBQ8N7X0 1667 aa21.4■■□□□ 1.02
SMAD5-209ENST00000514777 PPP6R1Q9UPN7 881 aa21.39■■□□□ 1.01
SMAD5-209ENST00000514777 DNMT1P26358 1616 aaKnown RBP21.39■■□□□ 1.01
SMAD5-209ENST00000514777 CCNB3Q8WWL7 1395 aa21.38■■□□□ 1.01
SMAD5-209ENST00000514777 ZNF644Q9H582 1327 aaPredicted RBP21.38■■□□□ 1.01
SMAD5-209ENST00000514777 A2ML1A8K2U0 1454 aa21.36■■□□□ 1.01
SMAD5-209ENST00000514777 MBD5Q9P267 1494 aa21.35■■□□□ 1.01
SMAD5-209ENST00000514777 FBXO31Q5XUX0 539 aaPredicted RBP21.33■■□□□ 1.01
SMAD5-209ENST00000514777 POLR1AO95602 1720 aaPredicted RBP21.32■■□□□ 1
SMAD5-209ENST00000514777 NEURL4Q96JN8 1562 aa21.31■■□□□ 1
SMAD5-209ENST00000514777 HSPA1LP34931 641 aa21.31■■□□□ 1
SMAD5-209ENST00000514777 DHX29Q7Z478 1369 aaKnown RBP21.31■■□□□ 1
SMAD5-209ENST00000514777 TIAM1Q13009 1591 aa21.31■■□□□ 1
SMAD5-209ENST00000514777 MTUS2Q5JR59 1369 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms