RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 CARD11Q9BXL7 1154 aa18.52■□□□□ 0.55
TSPAN17-208ENST00000514705 ZBED9Q6R2W3 1325 aa18.51■□□□□ 0.55
TSPAN17-208ENST00000514705 SNAPC4Q5SXM2 1469 aa18.51■□□□□ 0.55
TSPAN17-208ENST00000514705 NEFMP07197 916 aa18.5■□□□□ 0.55
TSPAN17-208ENST00000514705 NUDCQ9Y266 331 aa18.49■□□□□ 0.55
TSPAN17-208ENST00000514705 IPO9Q96P70 1041 aaKnown RBP18.47■□□□□ 0.55
TSPAN17-208ENST00000514705 PAK3O75914 559 aaPredicted RBP18.46■□□□□ 0.55
TSPAN17-208ENST00000514705 ZNF608Q9ULD9 1512 aaPredicted RBP18.46■□□□□ 0.54
TSPAN17-208ENST00000514705 PTPRGP23470 1445 aa18.45■□□□□ 0.54
TSPAN17-208ENST00000514705 EIF5BO60841 1220 aaKnown RBP18.45■□□□□ 0.54
TSPAN17-208ENST00000514705 RGL3Q3MIN7 710 aa18.45■□□□□ 0.54
TSPAN17-208ENST00000514705 CCDC7Q96M83 1385 aa18.44■□□□□ 0.54
TSPAN17-208ENST00000514705 C11orf95C9JLR9 678 aaPredicted RBP18.43■□□□□ 0.54
TSPAN17-208ENST00000514705 KIF7Q2M1P5 1343 aa18.42■□□□□ 0.54
TSPAN17-208ENST00000514705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.42■□□□□ 0.54
TSPAN17-208ENST00000514705 CNTLNQ9NXG0 1405 aa18.42■□□□□ 0.54
TSPAN17-208ENST00000514705 PKD2Q13563 968 aa18.4■□□□□ 0.54
TSPAN17-208ENST00000514705 CASKIN1Q8WXD9 1431 aa18.4■□□□□ 0.54
TSPAN17-208ENST00000514705 KIF21AQ7Z4S6 1674 aa18.4■□□□□ 0.54
TSPAN17-208ENST00000514705 NBPF8Q3BBV2 869 aa18.39■□□□□ 0.53
TSPAN17-208ENST00000514705 MYOM3Q5VTT5 1437 aa18.38■□□□□ 0.53
TSPAN17-208ENST00000514705 DCAF11Q8TEB1 546 aa18.37■□□□□ 0.53
TSPAN17-208ENST00000514705 CC2D1BQ5T0F9 858 aaKnown RBP18.37■□□□□ 0.53
TSPAN17-208ENST00000514705 HFM1A2PYH4 1435 aa18.37■□□□□ 0.53
TSPAN17-208ENST00000514705 RCAN3Q9UKA8 241 aa18.36■□□□□ 0.53
TSPAN17-208ENST00000514705 NCOA2Q15596 1464 aa18.36■□□□□ 0.53
TSPAN17-208ENST00000514705 AKNAQ7Z591 1439 aa18.36■□□□□ 0.53
TSPAN17-208ENST00000514705 CANXP27824 592 aaKnown RBP18.35■□□□□ 0.53
TSPAN17-208ENST00000514705 EXOC6Q8TAG9 804 aa18.35■□□□□ 0.53
TSPAN17-208ENST00000514705 PCF11O94913 1555 aaKnown RBP18.34■□□□□ 0.53
TSPAN17-208ENST00000514705 NAIPQ13075 1403 aa18.34■□□□□ 0.53
TSPAN17-208ENST00000514705 FYCO1Q9BQS8 1478 aa18.34■□□□□ 0.53
TSPAN17-208ENST00000514705 ZNF644Q9H582 1327 aaPredicted RBP18.32■□□□□ 0.52
TSPAN17-208ENST00000514705 SYNJ2O15056 1496 aa18.32■□□□□ 0.52
TSPAN17-208ENST00000514705 MAGI1Q96QZ7 1491 aaPredicted RBP18.32■□□□□ 0.52
TSPAN17-208ENST00000514705 PPM1GO15355 546 aaPredicted RBP18.32■□□□□ 0.52
TSPAN17-208ENST00000514705 CYB5RLQ6IPT4 315 aa18.32■□□□□ 0.52
TSPAN17-208ENST00000514705 CUL7Q14999 1698 aa18.32■□□□□ 0.52
TSPAN17-208ENST00000514705 PRG4Q92954 1404 aaPredicted RBP18.31■□□□□ 0.52
TSPAN17-208ENST00000514705 MAP3K1Q13233 1512 aa18.3■□□□□ 0.52
TSPAN17-208ENST00000514705 WDR43Q15061 677 aaKnown RBP eCLIP18.3■□□□□ 0.52
TSPAN17-208ENST00000514705 RGS3P49796 1198 aa18.3■□□□□ 0.52
TSPAN17-208ENST00000514705 ARXQ96QS3 562 aa18.3■□□□□ 0.52
TSPAN17-208ENST00000514705 ESF1Q9H501 851 aaKnown RBP18.3■□□□□ 0.52
TSPAN17-208ENST00000514705 KIAA0586Q9BVV6 1533 aa18.3■□□□□ 0.52
TSPAN17-208ENST00000514705 PTPRKQ15262 1439 aa18.29■□□□□ 0.52
TSPAN17-208ENST00000514705 PLIN1O60240 522 aa18.29■□□□□ 0.52
TSPAN17-208ENST00000514705 PRDM2Q13029 1718 aa18.29■□□□□ 0.52
TSPAN17-208ENST00000514705 TCERG1O14776 1098 aaKnown RBP18.29■□□□□ 0.52
TSPAN17-208ENST00000514705 DDRGK1Q96HY6 314 aa18.29■□□□□ 0.52
TSPAN17-208ENST00000514705 ST20-MTHFSA0A0A6YYL1 179 aa18.28■□□□□ 0.52
TSPAN17-208ENST00000514705 GRIN2AQ12879 1464 aa18.28■□□□□ 0.52
TSPAN17-208ENST00000514705 USP47Q96K76 1375 aa18.27■□□□□ 0.52
TSPAN17-208ENST00000514705 PDE4AP27815 886 aa18.27■□□□□ 0.52
TSPAN17-208ENST00000514705 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.27■□□□□ 0.52
TSPAN17-208ENST00000514705 WDR62O43379 1518 aa18.26■□□□□ 0.51
TSPAN17-208ENST00000514705 EFCAB5A4FU69 1503 aa18.25■□□□□ 0.51
TSPAN17-208ENST00000514705 RRP1P56182 461 aaKnown RBP18.24■□□□□ 0.51
TSPAN17-208ENST00000514705 EFCAB2Q5VUJ9 269 aa18.24■□□□□ 0.51
TSPAN17-208ENST00000514705 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.24■□□□□ 0.51
TSPAN17-208ENST00000514705 SLC4A3P48751 1232 aa18.23■□□□□ 0.51
TSPAN17-208ENST00000514705 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.22■□□□□ 0.51
TSPAN17-208ENST00000514705 NUP155O75694 1391 aa18.21■□□□□ 0.51
TSPAN17-208ENST00000514705 RALBP1Q15311 655 aa18.21■□□□□ 0.51
TSPAN17-208ENST00000514705 TRHP20396 242 aaPredicted RBP18.2■□□□□ 0.5
TSPAN17-208ENST00000514705 IQGAP2Q13576 1575 aa18.2■□□□□ 0.5
TSPAN17-208ENST00000514705 CHGAP10645 457 aaKnown RBP18.18■□□□□ 0.5
TSPAN17-208ENST00000514705 KTN1Q86UP2 1357 aaKnown RBP18.17■□□□□ 0.5
TSPAN17-208ENST00000514705 NLRP13Q86W25 1043 aa18.17■□□□□ 0.5
TSPAN17-208ENST00000514705 MYBBP1AQ9BQG0 1328 aaKnown RBP18.17■□□□□ 0.5
TSPAN17-208ENST00000514705 IL27Q8NEV9 243 aa18.17■□□□□ 0.5
TSPAN17-208ENST00000514705 PNISRQ8TF01 805 aaKnown RBP18.17■□□□□ 0.5
TSPAN17-208ENST00000514705 KNSTRNQ9Y448 316 aa18.16■□□□□ 0.5
TSPAN17-208ENST00000514705 ROCK2O75116 1388 aaKnown RBP18.15■□□□□ 0.5
TSPAN17-208ENST00000514705 KIF15Q9NS87 1388 aa18.15■□□□□ 0.5
TSPAN17-208ENST00000514705 CDCA7LQ96GN5 454 aa18.15■□□□□ 0.5
TSPAN17-208ENST00000514705 HNRNPMP52272 730 aaKnown RBP eCLIP18.15■□□□□ 0.5
TSPAN17-208ENST00000514705 PTPN23Q9H3S7 1636 aa18.14■□□□□ 0.49
TSPAN17-208ENST00000514705 PLPPR3Q6T4P5 718 aa18.14■□□□□ 0.49
TSPAN17-208ENST00000514705 CRBNQ96SW2 442 aa18.14■□□□□ 0.49
TSPAN17-208ENST00000514705 SMG6Q86US8 1419 aaKnown RBP18.14■□□□□ 0.49
TSPAN17-208ENST00000514705 ANO8Q9HCE9 1232 aaPredicted RBP18.13■□□□□ 0.49
TSPAN17-208ENST00000514705 NCOA1Q15788 1441 aa18.12■□□□□ 0.49
TSPAN17-208ENST00000514705 SKAP1Q86WV1 359 aa18.11■□□□□ 0.49
TSPAN17-208ENST00000514705 STAG3Q9UJ98 1225 aa18.11■□□□□ 0.49
TSPAN17-208ENST00000514705 NEUROD2Q15784 382 aa18.09■□□□□ 0.49
TSPAN17-208ENST00000514705 UPF2Q9HAU5 1272 aaKnown RBP18.09■□□□□ 0.49
TSPAN17-208ENST00000514705 EIF4G3O43432 1585 aaKnown RBP18.09■□□□□ 0.49
TSPAN17-208ENST00000514705 ANKRD30AQ9BXX3 1397 aa18.09■□□□□ 0.49
TSPAN17-208ENST00000514705 PDE3BQ13370 1112 aa18.09■□□□□ 0.49
TSPAN17-208ENST00000514705 RSPH4AQ5TD94 716 aa18.07■□□□□ 0.48
TSPAN17-208ENST00000514705 ANKRD30BQ9BXX2 1392 aa18.07■□□□□ 0.48
TSPAN17-208ENST00000514705 TMF1P82094 1093 aa18.07■□□□□ 0.48
TSPAN17-208ENST00000514705 ARID4BQ4LE39 1312 aaPredicted RBP18.06■□□□□ 0.48
TSPAN17-208ENST00000514705 USP35Q9P2H5 1018 aa18.05■□□□□ 0.48
TSPAN17-208ENST00000514705 PANK3Q9H999 370 aa18.05■□□□□ 0.48
TSPAN17-208ENST00000514705 ADAMTS12P58397 1594 aa18.05■□□□□ 0.48
TSPAN17-208ENST00000514705 FRAT1Q92837 279 aaPredicted RBP18.05■□□□□ 0.48
TSPAN17-208ENST00000514705 EHBP1L1Q8N3D4 1523 aa18.05■□□□□ 0.48
TSPAN17-208ENST00000514705 MS4A1P11836 297 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms