RNA–Protein interactions for RNA: ENST00000514033.1

KLF3-203, Transcript of Kruppel like factor 3, humanhuman

TSL 1 (best) BASIC

Gene KLF3, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-203ENST00000514033 CAMSAP2Q08AD1 1489 aa31.94■■■□□ 2.7
KLF3-203ENST00000514033 DIEXFQ68CQ4 756 aaKnown RBP31.93■■■□□ 2.7
KLF3-203ENST00000514033 ROCK1Q13464 1354 aa31.92■■■□□ 2.7
KLF3-203ENST00000514033 ABCC2Q92887 1545 aa31.89■■■□□ 2.7
KLF3-203ENST00000514033 DNAJC5Q9H3Z4 198 aa31.89■■■□□ 2.69
KLF3-203ENST00000514033 RIMBP3CA6NJZ7 1639 aa31.87■■■□□ 2.69
KLF3-203ENST00000514033 RIMBP3BA6NNM3 1639 aa31.87■■■□□ 2.69
KLF3-203ENST00000514033 RIMBP3Q9UFD9 1639 aa31.87■■■□□ 2.69
KLF3-203ENST00000514033 CDC42BPAQ5VT25 1732 aa31.86■■■□□ 2.69
KLF3-203ENST00000514033 SIN3AQ96ST3 1273 aa31.84■■■□□ 2.69
KLF3-203ENST00000514033 KDM6BO15054 1643 aa31.83■■■□□ 2.69
KLF3-203ENST00000514033 TIMELESSQ9UNS1 1208 aa31.81■■■□□ 2.68
KLF3-203ENST00000514033 ZNF777Q9ULD5 760 aaPredicted RBP31.8■■■□□ 2.68
KLF3-203ENST00000514033 NEUROD1Q13562 356 aa31.8■■■□□ 2.68
KLF3-203ENST00000514033 UHRF1BP1LA0JNW5 1464 aa31.76■■■□□ 2.67
KLF3-203ENST00000514033 CROCC2H7BZ55 1655 aa31.76■■■□□ 2.67
KLF3-203ENST00000514033 ACIN1Q9UKV3 1341 aaKnown RBP31.76■■■□□ 2.67
KLF3-203ENST00000514033 ADGBQ8N7X0 1667 aa31.73■■■□□ 2.67
KLF3-203ENST00000514033 ADGRL2O95490 1459 aa31.71■■■□□ 2.67
KLF3-203ENST00000514033 TRIM52Q96A61 297 aa31.71■■■□□ 2.67
KLF3-203ENST00000514033 PREX2Q70Z35 1606 aa31.68■■■□□ 2.66
KLF3-203ENST00000514033 NCOA1Q15788 1441 aa31.68■■■□□ 2.66
KLF3-203ENST00000514033 DENND4BO75064 1496 aaPredicted RBP31.66■■■□□ 2.66
KLF3-203ENST00000514033 KDM5BQ9UGL1 1544 aa31.66■■■□□ 2.66
KLF3-203ENST00000514033 ZCCHC11Q5TAX3 1644 aaKnown RBP31.65■■■□□ 2.66
KLF3-203ENST00000514033 SHANK2Q9UPX8 1470 aa31.65■■■□□ 2.66
KLF3-203ENST00000514033 CDC42BPBQ9Y5S2 1711 aa31.63■■■□□ 2.65
KLF3-203ENST00000514033 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.63■■■□□ 2.659e-7■■□□□ 13.6
KLF3-203ENST00000514033 ANKRD30AQ9BXX3 1397 aa31.62■■■□□ 2.65
KLF3-203ENST00000514033 TTC37Q6PGP7 1564 aa31.62■■■□□ 2.65
KLF3-203ENST00000514033 ARHGEF5Q12774 1597 aa31.61■■■□□ 2.65
KLF3-203ENST00000514033 MPHOSPH9Q99550 1183 aa31.61■■■□□ 2.65
KLF3-203ENST00000514033 SAMD9LQ8IVG5 1584 aa31.59■■■□□ 2.65
KLF3-203ENST00000514033 TONSLQ96HA7 1378 aa31.59■■■□□ 2.65
KLF3-203ENST00000514033 C9orf84Q5VXU9 1444 aa31.58■■■□□ 2.65
KLF3-203ENST00000514033 PPP1R15AO75807 674 aaPredicted RBP31.57■■■□□ 2.64
KLF3-203ENST00000514033 MBD5Q9P267 1494 aa31.56■■■□□ 2.64
KLF3-203ENST00000514033 ARHGAP5Q13017 1502 aa31.53■■■□□ 2.64
KLF3-203ENST00000514033 HNRNPMP52272 730 aaKnown RBP eCLIP31.52■■■□□ 2.64
KLF3-203ENST00000514033 CYB5RLQ6IPT4 315 aa31.52■■■□□ 2.64
KLF3-203ENST00000514033 MYO5CQ9NQX4 1742 aa31.52■■■□□ 2.64
KLF3-203ENST00000514033 TSPY4P0CV99 314 aa31.52■■■□□ 2.64
KLF3-203ENST00000514033 TSPY10P0CW01 314 aa31.52■■■□□ 2.64
KLF3-203ENST00000514033 CCDC141Q6ZP82 1450 aa31.51■■■□□ 2.63
KLF3-203ENST00000514033 KCNH8Q96L42 1107 aa31.5■■■□□ 2.63
KLF3-203ENST00000514033 RSPH4AQ5TD94 716 aa31.48■■■□□ 2.63
KLF3-203ENST00000514033 ANKRD50Q9ULJ7 1429 aa31.47■■■□□ 2.63
KLF3-203ENST00000514033 PZPP20742 1482 aa31.45■■■□□ 2.62
KLF3-203ENST00000514033 SLC4A1APQ9BWU0 796 aaKnown RBP31.44■■■□□ 2.62
KLF3-203ENST00000514033 PLEKHH2Q8IVE3 1493 aa31.44■■■□□ 2.62
KLF3-203ENST00000514033 SYCP2Q9BX26 1530 aa31.43■■■□□ 2.62
KLF3-203ENST00000514033 PLCH2O75038 1416 aa31.42■■■□□ 2.62
KLF3-203ENST00000514033 KIAA1107Q9UPP5 1409 aa31.41■■■□□ 2.62
KLF3-203ENST00000514033 ANKRD30BQ9BXX2 1392 aa31.41■■■□□ 2.62
KLF3-203ENST00000514033 FOXD1Q16676 465 aa31.4■■■□□ 2.62
KLF3-203ENST00000514033 KIF15Q9NS87 1388 aa31.39■■■□□ 2.62
KLF3-203ENST00000514033 MAST1Q9Y2H9 1570 aa31.38■■■□□ 2.61
KLF3-203ENST00000514033 WDR7Q9Y4E6 1490 aa31.36■■■□□ 2.61
KLF3-203ENST00000514033 MIER1Q8N108 512 aa31.35■■■□□ 2.61
KLF3-203ENST00000514033 EFCAB2Q5VUJ9 269 aa31.33■■■□□ 2.61
KLF3-203ENST00000514033 RPRD2Q5VT52 1461 aaKnown RBP31.32■■■□□ 2.6
KLF3-203ENST00000514033 ARAP3Q8WWN8 1544 aa31.3■■■□□ 2.6
KLF3-203ENST00000514033 KDM5DQ9BY66 1539 aa31.3■■■□□ 2.6
KLF3-203ENST00000514033 ARHGEF12Q9NZN5 1544 aa31.29■■■□□ 2.6
KLF3-203ENST00000514033 ABCC1P33527 1531 aa31.26■■■□□ 2.6
KLF3-203ENST00000514033 NUP155O75694 1391 aa31.26■■■□□ 2.59
KLF3-203ENST00000514033 PLXNC1O60486 1568 aa31.25■■■□□ 2.59
KLF3-203ENST00000514033 PKD2Q13563 968 aa31.23■■■□□ 2.59
KLF3-203ENST00000514033 ASXL2Q76L83 1435 aa31.21■■■□□ 2.59
KLF3-203ENST00000514033 ABCA9Q8IUA7 1624 aa31.21■■■□□ 2.59
KLF3-203ENST00000514033 L3MBTL2Q969R5 705 aa31.21■■■□□ 2.59
KLF3-203ENST00000514033 TEX14Q8IWB6 1497 aa31.18■■■□□ 2.58
KLF3-203ENST00000514033 TRAPPC8Q9Y2L5 1435 aa31.15■■■□□ 2.58
KLF3-203ENST00000514033 NPM1P06748 294 aaKnown RBP eCLIP31.14■■■□□ 2.58
KLF3-203ENST00000514033 DUOX2Q9NRD8 1548 aa31.13■■■□□ 2.57
KLF3-203ENST00000514033 UNC13BO14795 1591 aa31.12■■■□□ 2.57
KLF3-203ENST00000514033 FANCAO15360 1455 aa31.1■■■□□ 2.57
KLF3-203ENST00000514033 FAM135AQ9P2D6 1515 aa31.09■■■□□ 2.57
KLF3-203ENST00000514033 HIRIP3Q9BW71 556 aaPredicted RBP31.09■■■□□ 2.57
KLF3-203ENST00000514033 ERBINQ96RT1 1412 aa31.07■■■□□ 2.56
KLF3-203ENST00000514033 RTEL1-TNFRSF6BF6WH68 1400 aa31.05■■■□□ 2.56
KLF3-203ENST00000514033 SPAG9O60271 1321 aaKnown RBP31.03■■■□□ 2.56
KLF3-203ENST00000514033 ZFYVE16Q7Z3T8 1539 aa31.01■■■□□ 2.55
KLF3-203ENST00000514033 CENPBP07199 599 aaPredicted RBP31■■■□□ 2.55
KLF3-203ENST00000514033 DDX10Q13206 875 aaKnown RBP31■■■□□ 2.55
KLF3-203ENST00000514033 NBPF8Q3BBV2 869 aa30.99■■■□□ 2.55
KLF3-203ENST00000514033 AFAP1Q8N556 730 aa30.99■■■□□ 2.55
KLF3-203ENST00000514033 IQGAP3Q86VI3 1631 aa30.99■■■□□ 2.55
KLF3-203ENST00000514033 ADGRL1O94910 1474 aa30.98■■■□□ 2.55
KLF3-203ENST00000514033 MAGI2Q86UL8 1455 aa30.98■■■□□ 2.55
KLF3-203ENST00000514033 HSPA5P11021 654 aaKnown RBP30.95■■■□□ 2.54
KLF3-203ENST00000514033 SCAPERQ9BY12 1400 aa30.94■■■□□ 2.54
KLF3-203ENST00000514033 EIF4G2P78344 907 aaKnown RBP eCLIP30.94■■■□□ 2.54
KLF3-203ENST00000514033 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.94■■■□□ 2.541e-7■□□□□ 8.2
KLF3-203ENST00000514033 INO80Q9ULG1 1556 aaPredicted RBP30.94■■■□□ 2.54
KLF3-203ENST00000514033 ATP7AQ04656 1500 aa30.92■■■□□ 2.54
KLF3-203ENST00000514033 YTHDC1Q96MU7 727 aaKnown RBP30.91■■■□□ 2.54
KLF3-203ENST00000514033 CD109Q6YHK3 1445 aa30.88■■■□□ 2.53
KLF3-203ENST00000514033 CFAP74Q9C0B2 1584 aa30.86■■■□□ 2.53
KLF3-203ENST00000514033 DIP2BQ9P265 1576 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms