RNA–Protein interactions for RNA: ENST00000513646.1

SLC1A3-212, Transcript of solute carrier family 1 member 3, humanhuman

TSL 2

Gene SLC1A3, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-212ENST00000513646 BIVM-ERCC5R4GMW8 1640 aa13.16□□□□□ -0.3
SLC1A3-212ENST00000513646 RICTORQ6R327 1708 aa13.14□□□□□ -0.31
SLC1A3-212ENST00000513646 EFCAB5A4FU69 1503 aa13.13□□□□□ -0.31
SLC1A3-212ENST00000513646 ABCA9Q8IUA7 1624 aa13.13□□□□□ -0.31
SLC1A3-212ENST00000513646 PTPRKQ15262 1439 aa13.13□□□□□ -0.31
SLC1A3-212ENST00000513646 PPP6R1Q9UPN7 881 aa13.11□□□□□ -0.31
SLC1A3-212ENST00000513646 FHOD3Q2V2M9 1422 aa13.11□□□□□ -0.31
SLC1A3-212ENST00000513646 ARID3CA6NKF2 412 aa13.1□□□□□ -0.31
SLC1A3-212ENST00000513646 TRAPPC8Q9Y2L5 1435 aa13.09□□□□□ -0.31
SLC1A3-212ENST00000513646 PKD2Q13563 968 aa13.08□□□□□ -0.32
SLC1A3-212ENST00000513646 IGF1RP08069 1367 aa13.07□□□□□ -0.32
SLC1A3-212ENST00000513646 TRIM52Q96A61 297 aa13.07□□□□□ -0.32
SLC1A3-212ENST00000513646 C3P01024 1663 aa13.07□□□□□ -0.32
SLC1A3-212ENST00000513646 CPS1P31327 1500 aa13.07□□□□□ -0.32
SLC1A3-212ENST00000513646 ZMYM4Q5VZL5 1548 aa13.07□□□□□ -0.32
SLC1A3-212ENST00000513646 ALKQ9UM73 1620 aa13.06□□□□□ -0.32
SLC1A3-212ENST00000513646 RBM33Q96EV2 1170 aaKnown RBP13.05□□□□□ -0.32
SLC1A3-212ENST00000513646 MAGI2Q86UL8 1455 aa13.04□□□□□ -0.32
SLC1A3-212ENST00000513646 ESF1Q9H501 851 aaKnown RBP13.04□□□□□ -0.32
SLC1A3-212ENST00000513646 C9orf84Q5VXU9 1444 aa13.03□□□□□ -0.32
SLC1A3-212ENST00000513646 ATP10AO60312 1499 aa13.02□□□□□ -0.33
SLC1A3-212ENST00000513646 ABCA8O94911 1581 aa13.02□□□□□ -0.33
SLC1A3-212ENST00000513646 HECW1Q76N89 1606 aa13.02□□□□□ -0.33
SLC1A3-212ENST00000513646 UGGT2Q9NYU1 1516 aa13.01□□□□□ -0.33
SLC1A3-212ENST00000513646 SHANK2Q9UPX8 1470 aa12.99□□□□□ -0.33
SLC1A3-212ENST00000513646 ZRANB1Q9UGI0 708 aa12.99□□□□□ -0.33
SLC1A3-212ENST00000513646 CARMIL1Q5VZK9 1371 aa12.98□□□□□ -0.33
SLC1A3-212ENST00000513646 PLA2R1Q13018 1463 aa12.97□□□□□ -0.33
SLC1A3-212ENST00000513646 TCOF1Q13428 1488 aaKnown RBP12.97□□□□□ -0.33
SLC1A3-212ENST00000513646 SUPT6HQ7KZ85 1726 aaKnown RBP12.96□□□□□ -0.33
SLC1A3-212ENST00000513646 RAPGEF2Q9Y4G8 1499 aa12.96□□□□□ -0.34
SLC1A3-212ENST00000513646 SETBP1Q9Y6X0 1596 aa12.95□□□□□ -0.34
SLC1A3-212ENST00000513646 FOXD1Q16676 465 aa12.95□□□□□ -0.34
SLC1A3-212ENST00000513646 ATP10BO94823 1461 aa12.94□□□□□ -0.34
SLC1A3-212ENST00000513646 CFAP74Q9C0B2 1584 aa12.94□□□□□ -0.34
SLC1A3-212ENST00000513646 KIF27Q86VH2 1401 aa12.91□□□□□ -0.34
SLC1A3-212ENST00000513646 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.91□□□□□ -0.34
SLC1A3-212ENST00000513646 HNRNPUL2Q1KMD3 747 aaKnown RBP12.91□□□□□ -0.34
SLC1A3-212ENST00000513646 LRRC7Q96NW7 1537 aa12.91□□□□□ -0.34
SLC1A3-212ENST00000513646 MYT1LQ9UL68 1186 aa12.88□□□□□ -0.35
SLC1A3-212ENST00000513646 NPATQ14207 1427 aa12.88□□□□□ -0.35
SLC1A3-212ENST00000513646 RNF17Q9BXT8 1623 aaKnown RBP12.87□□□□□ -0.35
SLC1A3-212ENST00000513646 SCAPERQ9BY12 1400 aa12.87□□□□□ -0.35
SLC1A3-212ENST00000513646 RXRBP28702 533 aa12.86□□□□□ -0.35
SLC1A3-212ENST00000513646 ZNF772Q68DY9 489 aaPredicted RBP12.85□□□□□ -0.35
SLC1A3-212ENST00000513646 ZNF142P52746 1687 aaPredicted RBP12.85□□□□□ -0.35
SLC1A3-212ENST00000513646 CEP170BQ9Y4F5 1589 aaPredicted RBP12.85□□□□□ -0.35
SLC1A3-212ENST00000513646 MYO3AQ8NEV4 1616 aa12.84□□□□□ -0.35
SLC1A3-212ENST00000513646 FAM9AQ8IZU1 332 aaPredicted RBP12.84□□□□□ -0.35
SLC1A3-212ENST00000513646 CNTLNQ9NXG0 1405 aa12.84□□□□□ -0.35
SLC1A3-212ENST00000513646 YY1P25490 414 aa12.83□□□□□ -0.36
SLC1A3-212ENST00000513646 VWDEQ8N2E2 1590 aa12.82□□□□□ -0.36
SLC1A3-212ENST00000513646 GOLGA3Q08378 1498 aa12.82□□□□□ -0.36
SLC1A3-212ENST00000513646 MEX3CQ5U5Q3 659 aaKnown RBP12.81□□□□□ -0.36
SLC1A3-212ENST00000513646 NUTM2BA6NNL0 878 aaPredicted RBP12.8□□□□□ -0.36
SLC1A3-212ENST00000513646 NUTM2EB1AL46 878 aaPredicted RBP12.8□□□□□ -0.36
SLC1A3-212ENST00000513646 NUTM2DQ5VT03 806 aaPredicted RBP12.8□□□□□ -0.36
SLC1A3-212ENST00000513646 NUTM2AQ8IVF1 878 aaPredicted RBP12.8□□□□□ -0.36
SLC1A3-212ENST00000513646 SENP3-EIF4A1A0A087X0R7 540 aa12.79□□□□□ -0.36
SLC1A3-212ENST00000513646 POLR1AO95602 1720 aaPredicted RBP12.79□□□□□ -0.36
SLC1A3-212ENST00000513646 AGLP35573 1532 aa12.78□□□□□ -0.36
SLC1A3-212ENST00000513646 NEURL4Q96JN8 1562 aa12.78□□□□□ -0.36
SLC1A3-212ENST00000513646 ZMYM3Q14202 1370 aa12.78□□□□□ -0.36
SLC1A3-212ENST00000513646 CDK12Q9NYV4 1490 aaPredicted RBP12.77□□□□□ -0.37
SLC1A3-212ENST00000513646 FAM135BQ49AJ0 1406 aa12.76□□□□□ -0.37
SLC1A3-212ENST00000513646 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.76□□□□□ -0.37
SLC1A3-212ENST00000513646 DIP2CQ9Y2E4 1556 aa12.74□□□□□ -0.37
SLC1A3-212ENST00000513646 MROH2AA6NES4 1674 aa12.73□□□□□ -0.37
SLC1A3-212ENST00000513646 RAPGEF6Q8TEU7 1601 aa12.73□□□□□ -0.37
SLC1A3-212ENST00000513646 STRCP1A6NGW2 1772 aa12.73□□□□□ -0.37
SLC1A3-212ENST00000513646 SYNMO15061 1565 aa12.73□□□□□ -0.37
SLC1A3-212ENST00000513646 JCADQ9P266 1359 aa12.72□□□□□ -0.37
SLC1A3-212ENST00000513646 PLEKHD1A6NEE1 506 aa12.72□□□□□ -0.37
SLC1A3-212ENST00000513646 DNMT1P26358 1616 aaKnown RBP12.72□□□□□ -0.37
SLC1A3-212ENST00000513646 REREQ9P2R6 1566 aa12.72□□□□□ -0.37
SLC1A3-212ENST00000513646 ANKLE2Q86XL3 938 aa12.71□□□□□ -0.37
SLC1A3-212ENST00000513646 P3H3Q8IVL6 736 aa12.71□□□□□ -0.37
SLC1A3-212ENST00000513646 AFAP1Q8N556 730 aa12.71□□□□□ -0.37
SLC1A3-212ENST00000513646 LRP5O75197 1615 aa12.7□□□□□ -0.38
SLC1A3-212ENST00000513646 A2ML1A8K2U0 1454 aa12.7□□□□□ -0.38
SLC1A3-212ENST00000513646 RGS12O14924 1447 aa12.7□□□□□ -0.38
SLC1A3-212ENST00000513646 ZNF518AQ6AHZ1 1483 aa12.69□□□□□ -0.38
SLC1A3-212ENST00000513646 NPHP4O75161 1426 aaPredicted RBP12.69□□□□□ -0.38
SLC1A3-212ENST00000513646 LRP6O75581 1613 aa12.69□□□□□ -0.38
SLC1A3-212ENST00000513646 CDK13Q14004 1512 aaKnown RBP12.68□□□□□ -0.38
SLC1A3-212ENST00000513646 ROBO1Q9Y6N7 1651 aa12.68□□□□□ -0.38
SLC1A3-212ENST00000513646 ABCA6Q8N139 1617 aa12.68□□□□□ -0.38
SLC1A3-212ENST00000513646 ATAD2Q6PL18 1390 aa12.68□□□□□ -0.38
SLC1A3-212ENST00000513646 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.67□□□□□ -0.38
SLC1A3-212ENST00000513646 CLTCQ00610 1675 aaKnown RBP12.64□□□□□ -0.39
SLC1A3-212ENST00000513646 CTTNBP2Q8WZ74 1663 aa12.64□□□□□ -0.39
SLC1A3-212ENST00000513646 PHLPP1O60346 1717 aa12.64□□□□□ -0.39
SLC1A3-212ENST00000513646 KDM5CP41229 1560 aa12.64□□□□□ -0.39
SLC1A3-212ENST00000513646 PLCH2O75038 1416 aa12.63□□□□□ -0.39
SLC1A3-212ENST00000513646 EFCAB2Q5VUJ9 269 aa12.63□□□□□ -0.39
SLC1A3-212ENST00000513646 SPATA31A6Q5VVP1 1343 aa12.62□□□□□ -0.39
SLC1A3-212ENST00000513646 IQGAP1P46940 1657 aa12.61□□□□□ -0.39
SLC1A3-212ENST00000513646 AFF2P51816 1311 aa12.61□□□□□ -0.39
SLC1A3-212ENST00000513646 MED14O60244 1454 aa12.6□□□□□ -0.39
SLC1A3-212ENST00000513646 RBM6P78332 1123 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms