RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 ABCC5O15440 1437 aa36.06■■■■□ 3.36
SPOCK3-221ENST00000512648 NAIPQ13075 1403 aa36.05■■■■□ 3.36
SPOCK3-221ENST00000512648 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.02■■■■□ 3.36
SPOCK3-221ENST00000512648 ACIN1Q9UKV3 1341 aaKnown RBP36■■■■□ 3.35
SPOCK3-221ENST00000512648 PREX2Q70Z35 1606 aa35.97■■■■□ 3.35
SPOCK3-221ENST00000512648 RSPH4AQ5TD94 716 aa35.93■■■■□ 3.34
SPOCK3-221ENST00000512648 WDR7Q9Y4E6 1490 aa35.93■■■■□ 3.34
SPOCK3-221ENST00000512648 TTC37Q6PGP7 1564 aa35.91■■■■□ 3.34
SPOCK3-221ENST00000512648 PLCH2O75038 1416 aa35.9■■■■□ 3.34
SPOCK3-221ENST00000512648 ZNF777Q9ULD5 760 aaPredicted RBP35.9■■■■□ 3.34
SPOCK3-221ENST00000512648 NPM1P06748 294 aaKnown RBP eCLIP35.88■■■■□ 3.33
SPOCK3-221ENST00000512648 KCNH8Q96L42 1107 aa35.88■■■■□ 3.33
SPOCK3-221ENST00000512648 GCC2Q8IWJ2 1684 aa35.88■■■■□ 3.33
SPOCK3-221ENST00000512648 CDC42BPBQ9Y5S2 1711 aa35.87■■■■□ 3.33
SPOCK3-221ENST00000512648 ADGRL2O95490 1459 aa35.87■■■■□ 3.33
SPOCK3-221ENST00000512648 CHIC2Q9UKJ5 165 aa35.87■■■■□ 3.33
SPOCK3-221ENST00000512648 ARHGEF5Q12774 1597 aa35.87■■■■□ 3.33
SPOCK3-221ENST00000512648 SHANK2Q9UPX8 1470 aa35.87■■■■□ 3.33
SPOCK3-221ENST00000512648 ARAP3Q8WWN8 1544 aa35.86■■■■□ 3.33
SPOCK3-221ENST00000512648 MBD5Q9P267 1494 aa35.85■■■■□ 3.33
SPOCK3-221ENST00000512648 PLEKHH2Q8IVE3 1493 aa35.84■■■■□ 3.33
SPOCK3-221ENST00000512648 KIAA1107Q9UPP5 1409 aa35.84■■■■□ 3.33
SPOCK3-221ENST00000512648 RRP7BPQ9NSQ0 103 aa35.84■■■■□ 3.33
SPOCK3-221ENST00000512648 ASXL2Q76L83 1435 aa35.82■■■■□ 3.33
SPOCK3-221ENST00000512648 MYO5CQ9NQX4 1742 aa35.82■■■■□ 3.32
SPOCK3-221ENST00000512648 NCOA1Q15788 1441 aa35.81■■■■□ 3.32
SPOCK3-221ENST00000512648 SAMD9LQ8IVG5 1584 aa35.81■■■■□ 3.32
SPOCK3-221ENST00000512648 ARHGAP5Q13017 1502 aa35.79■■■■□ 3.32
SPOCK3-221ENST00000512648 CROCC2H7BZ55 1655 aa35.79■■■■□ 3.32
SPOCK3-221ENST00000512648 EFCAB2Q5VUJ9 269 aa35.78■■■■□ 3.32
SPOCK3-221ENST00000512648 ANKRD30AQ9BXX3 1397 aa35.76■■■■□ 3.31
SPOCK3-221ENST00000512648 MAPKBP1O60336 1514 aa35.75■■■■□ 3.31
SPOCK3-221ENST00000512648 TSPY4P0CV99 314 aa35.74■■■■□ 3.31
SPOCK3-221ENST00000512648 TSPY10P0CW01 314 aa35.74■■■■□ 3.31
SPOCK3-221ENST00000512648 ABCA9Q8IUA7 1624 aa35.73■■■■□ 3.31
SPOCK3-221ENST00000512648 CCDC141Q6ZP82 1450 aa35.72■■■■□ 3.31
SPOCK3-221ENST00000512648 ADGBQ8N7X0 1667 aa35.72■■■■□ 3.31
SPOCK3-221ENST00000512648 HNRNPMP52272 730 aaKnown RBP eCLIP35.71■■■■□ 3.31
SPOCK3-221ENST00000512648 C9orf84Q5VXU9 1444 aa35.69■■■■□ 3.3
SPOCK3-221ENST00000512648 RIMBP3CA6NJZ7 1639 aa35.67■■■■□ 3.3
SPOCK3-221ENST00000512648 RIMBP3BA6NNM3 1639 aa35.67■■■■□ 3.3
SPOCK3-221ENST00000512648 RIMBP3Q9UFD9 1639 aa35.67■■■■□ 3.3
SPOCK3-221ENST00000512648 MAST1Q9Y2H9 1570 aa35.64■■■■□ 3.3
SPOCK3-221ENST00000512648 SYCP2Q9BX26 1530 aa35.61■■■■□ 3.29
SPOCK3-221ENST00000512648 KDM6BO15054 1643 aa35.61■■■■□ 3.29
SPOCK3-221ENST00000512648 TIMELESSQ9UNS1 1208 aa35.59■■■■□ 3.29
SPOCK3-221ENST00000512648 ABCC1P33527 1531 aa35.58■■■■□ 3.29
SPOCK3-221ENST00000512648 CYB5RLQ6IPT4 315 aa35.57■■■■□ 3.28
SPOCK3-221ENST00000512648 ARHGEF12Q9NZN5 1544 aa35.56■■■■□ 3.28
SPOCK3-221ENST00000512648 ANKRD50Q9ULJ7 1429 aa35.54■■■■□ 3.28
SPOCK3-221ENST00000512648 TRIM52Q96A61 297 aa35.5■■■■□ 3.27
SPOCK3-221ENST00000512648 FANCAO15360 1455 aa35.5■■■■□ 3.27
SPOCK3-221ENST00000512648 KIF15Q9NS87 1388 aa35.48■■■■□ 3.27
SPOCK3-221ENST00000512648 MPHOSPH9Q99550 1183 aa35.48■■■■□ 3.27
SPOCK3-221ENST00000512648 RTEL1-TNFRSF6BF6WH68 1400 aa35.45■■■■□ 3.27
SPOCK3-221ENST00000512648 DENND4BO75064 1496 aaPredicted RBP35.44■■■■□ 3.26
SPOCK3-221ENST00000512648 CD109Q6YHK3 1445 aa35.44■■■■□ 3.26
SPOCK3-221ENST00000512648 PLXNC1O60486 1568 aa35.44■■■■□ 3.26
SPOCK3-221ENST00000512648 TRAPPC8Q9Y2L5 1435 aa35.42■■■■□ 3.26
SPOCK3-221ENST00000512648 GLI2P10070 1586 aa35.37■■■■□ 3.25
SPOCK3-221ENST00000512648 SIN3AQ96ST3 1273 aa35.36■■■■□ 3.25
SPOCK3-221ENST00000512648 CFAP74Q9C0B2 1584 aa35.34■■■■□ 3.25
SPOCK3-221ENST00000512648 ADGRL1O94910 1474 aa35.34■■■■□ 3.25
SPOCK3-221ENST00000512648 PZPP20742 1482 aa35.34■■■■□ 3.25
SPOCK3-221ENST00000512648 KDM5DQ9BY66 1539 aa35.34■■■■□ 3.25
SPOCK3-221ENST00000512648 SCAPERQ9BY12 1400 aa35.33■■■■□ 3.25
SPOCK3-221ENST00000512648 DUOX2Q9NRD8 1548 aa35.33■■■■□ 3.25
SPOCK3-221ENST00000512648 SPAG9O60271 1321 aaKnown RBP35.31■■■■□ 3.24
SPOCK3-221ENST00000512648 SLC4A1APQ9BWU0 796 aaKnown RBP35.29■■■■□ 3.24
SPOCK3-221ENST00000512648 NEO1Q92859 1461 aa35.29■■■■□ 3.24
SPOCK3-221ENST00000512648 AFAP1Q8N556 730 aa35.28■■■■□ 3.24
SPOCK3-221ENST00000512648 ERBINQ96RT1 1412 aa35.28■■■■□ 3.24
SPOCK3-221ENST00000512648 ANKRD30BQ9BXX2 1392 aa35.26■■■■□ 3.24
SPOCK3-221ENST00000512648 NEUROD1Q13562 356 aa35.26■■■■□ 3.23
SPOCK3-221ENST00000512648 NUP155O75694 1391 aa35.23■■■■□ 3.23
SPOCK3-221ENST00000512648 ZFYVE16Q7Z3T8 1539 aa35.22■■■■□ 3.23
SPOCK3-221ENST00000512648 MAP3K4Q9Y6R4 1608 aa35.21■■■■□ 3.23
SPOCK3-221ENST00000512648 ZNF518AQ6AHZ1 1483 aa35.2■■■■□ 3.23
SPOCK3-221ENST00000512648 INO80Q9ULG1 1556 aaPredicted RBP35.19■■■■□ 3.22
SPOCK3-221ENST00000512648 ZNF316A6NFI3 1004 aaPredicted RBP35.16■■■■□ 3.22
SPOCK3-221ENST00000512648 PPP1R15AO75807 674 aaPredicted RBP35.16■■■■□ 3.22
SPOCK3-221ENST00000512648 UNC13BO14795 1591 aa35.16■■■■□ 3.22
SPOCK3-221ENST00000512648 ATP7AQ04656 1500 aa35.16■■■■□ 3.22
SPOCK3-221ENST00000512648 TONSLQ96HA7 1378 aa35.15■■■■□ 3.22
SPOCK3-221ENST00000512648 POGZQ7Z3K3 1410 aa35.14■■■■□ 3.22
SPOCK3-221ENST00000512648 MAGI2Q86UL8 1455 aa35.13■■■■□ 3.21
SPOCK3-221ENST00000512648 KDM5CP41229 1560 aa35.11■■■■□ 3.21
SPOCK3-221ENST00000512648 DIP2BQ9P265 1576 aa35.11■■■■□ 3.21
SPOCK3-221ENST00000512648 PKD2Q13563 968 aa35.11■■■■□ 3.21
SPOCK3-221ENST00000512648 MLH3Q9UHC1 1453 aa35.1■■■■□ 3.21
SPOCK3-221ENST00000512648 RPRD2Q5VT52 1461 aaKnown RBP35.09■■■■□ 3.21
SPOCK3-221ENST00000512648 FAM69CQ0P6D2 419 aa35.07■■■■□ 3.2
SPOCK3-221ENST00000512648 FOXD1Q16676 465 aa35.07■■■■□ 3.2
SPOCK3-221ENST00000512648 DHX29Q7Z478 1369 aaKnown RBP35.07■■■■□ 3.2
SPOCK3-221ENST00000512648 FAM135AQ9P2D6 1515 aa35.06■■■■□ 3.2
SPOCK3-221ENST00000512648 IQGAP3Q86VI3 1631 aa35.01■■■■□ 3.2
SPOCK3-221ENST00000512648 KIDINS220Q9ULH0 1771 aa34.99■■■■□ 3.19
SPOCK3-221ENST00000512648 EIF2AK4Q9P2K8 1649 aaKnown RBP34.97■■■■□ 3.19
SPOCK3-221ENST00000512648 TEX14Q8IWB6 1497 aa34.95■■■■□ 3.18
SPOCK3-221ENST00000512648 DEPDC5O75140 1603 aa34.93■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms