RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 ANP32CO43423 234 aa13.04□□□□□ -0.32
CPNE4-210ENST00000512332 TRIM52Q96A61 297 aa13.04□□□□□ -0.32
CPNE4-210ENST00000512332 CARMIL2Q6F5E8 1435 aa13.04□□□□□ -0.32
CPNE4-210ENST00000512332 KCNH8Q96L42 1107 aa13.04□□□□□ -0.32
CPNE4-210ENST00000512332 ADCY10Q96PN6 1610 aa13.02□□□□□ -0.33
CPNE4-210ENST00000512332 HIRIP3Q9BW71 556 aaPredicted RBP13.02□□□□□ -0.33
CPNE4-210ENST00000512332 SUPT16HQ9Y5B9 1047 aaKnown RBP13.02□□□□□ -0.33
CPNE4-210ENST00000512332 ARID3CA6NKF2 412 aa13.01□□□□□ -0.33
CPNE4-210ENST00000512332 ANKRD30BQ9BXX2 1392 aa13.01□□□□□ -0.33
CPNE4-210ENST00000512332 ITSN2Q9NZM3 1697 aa13□□□□□ -0.33
CPNE4-210ENST00000512332 JPH4Q96JJ6 628 aa13□□□□□ -0.33
CPNE4-210ENST00000512332 PRG4Q92954 1404 aaPredicted RBP13□□□□□ -0.33
CPNE4-210ENST00000512332 GPATCH8Q9UKJ3 1502 aaKnown RBP12.99□□□□□ -0.33
CPNE4-210ENST00000512332 RPRD2Q5VT52 1461 aaKnown RBP12.99□□□□□ -0.33
CPNE4-210ENST00000512332 PLB1Q6P1J6 1458 aa12.99□□□□□ -0.33
CPNE4-210ENST00000512332 ZNF644Q9H582 1327 aaPredicted RBP12.99□□□□□ -0.33
CPNE4-210ENST00000512332 CFDP1Q9UEE9 299 aaPredicted RBP12.98□□□□□ -0.33
CPNE4-210ENST00000512332 ADGRL2O95490 1459 aa12.98□□□□□ -0.33
CPNE4-210ENST00000512332 CAMSAP2Q08AD1 1489 aa12.97□□□□□ -0.33
CPNE4-210ENST00000512332 NCOA1Q15788 1441 aa12.97□□□□□ -0.33
CPNE4-210ENST00000512332 L3MBTL2Q969R5 705 aa12.97□□□□□ -0.33
CPNE4-210ENST00000512332 EIF4G2P78344 907 aaKnown RBP eCLIP12.96□□□□□ -0.33
CPNE4-210ENST00000512332 ABCA8O94911 1581 aa12.96□□□□□ -0.34
CPNE4-210ENST00000512332 HSPA5P11021 654 aaKnown RBP12.95□□□□□ -0.34
CPNE4-210ENST00000512332 ADGBQ8N7X0 1667 aa12.95□□□□□ -0.34
CPNE4-210ENST00000512332 TEX14Q8IWB6 1497 aa12.94□□□□□ -0.34
CPNE4-210ENST00000512332 SLC4A1APQ9BWU0 796 aaKnown RBP12.93□□□□□ -0.34
CPNE4-210ENST00000512332 KIF14Q15058 1648 aa12.93□□□□□ -0.34
CPNE4-210ENST00000512332 WASHC2AQ641Q2 1341 aa12.93□□□□□ -0.34
CPNE4-210ENST00000512332 FBLN2P98095 1184 aa12.93□□□□□ -0.34
CPNE4-210ENST00000512332 CROCC2H7BZ55 1655 aa12.92□□□□□ -0.34
CPNE4-210ENST00000512332 PZPP20742 1482 aa12.92□□□□□ -0.34
CPNE4-210ENST00000512332 PLEKHD1A6NEE1 506 aa12.92□□□□□ -0.34
CPNE4-210ENST00000512332 ANKRD30AQ9BXX3 1397 aa12.92□□□□□ -0.34
CPNE4-210ENST00000512332 ABCC10Q5T3U5 1492 aa12.91□□□□□ -0.34
CPNE4-210ENST00000512332 ATP10BO94823 1461 aa12.91□□□□□ -0.34
CPNE4-210ENST00000512332 SHANK2Q9UPX8 1470 aa12.91□□□□□ -0.34
CPNE4-210ENST00000512332 FOXD1Q16676 465 aa12.9□□□□□ -0.34
CPNE4-210ENST00000512332 SPATA31E1Q6ZUB1 1445 aa12.89□□□□□ -0.35
CPNE4-210ENST00000512332 KIAA1107Q9UPP5 1409 aa12.88□□□□□ -0.35
CPNE4-210ENST00000512332 CNTLNQ9NXG0 1405 aa12.88□□□□□ -0.35
CPNE4-210ENST00000512332 NBPF8Q3BBV2 869 aa12.88□□□□□ -0.35
CPNE4-210ENST00000512332 CDC42BPAQ5VT25 1732 aa12.88□□□□□ -0.35
CPNE4-210ENST00000512332 ANKRD50Q9ULJ7 1429 aa12.87□□□□□ -0.35
CPNE4-210ENST00000512332 CCDC7Q96M83 1385 aa12.86□□□□□ -0.35
CPNE4-210ENST00000512332 MBD5Q9P267 1494 aa12.85□□□□□ -0.35
CPNE4-210ENST00000512332 ZNF777Q9ULD5 760 aaPredicted RBP12.85□□□□□ -0.35
CPNE4-210ENST00000512332 PTPRGP23470 1445 aa12.84□□□□□ -0.35
CPNE4-210ENST00000512332 ARHGEF5Q12774 1597 aa12.84□□□□□ -0.35
CPNE4-210ENST00000512332 KDM5DQ9BY66 1539 aa12.84□□□□□ -0.35
CPNE4-210ENST00000512332 C9orf84Q5VXU9 1444 aa12.84□□□□□ -0.35
CPNE4-210ENST00000512332 RSPH4AQ5TD94 716 aa12.83□□□□□ -0.36
CPNE4-210ENST00000512332 POLR1AO95602 1720 aaPredicted RBP12.83□□□□□ -0.36
CPNE4-210ENST00000512332 C11orf95C9JLR9 678 aaPredicted RBP12.82□□□□□ -0.36
CPNE4-210ENST00000512332 TSPY4P0CV99 314 aa12.82□□□□□ -0.36
CPNE4-210ENST00000512332 TSPY10P0CW01 314 aa12.82□□□□□ -0.36
CPNE4-210ENST00000512332 PKD2Q13563 968 aa12.82□□□□□ -0.36
CPNE4-210ENST00000512332 UHRF1BP1Q6BDS2 1440 aa12.8□□□□□ -0.36
CPNE4-210ENST00000512332 NEFLP07196 543 aa12.8□□□□□ -0.36
CPNE4-210ENST00000512332 FKBP8Q14318 412 aa12.8□□□□□ -0.36
CPNE4-210ENST00000512332 PRKRIP1Q9H875 184 aaPredicted RBP12.8□□□□□ -0.36
CPNE4-210ENST00000512332 ARID4BQ4LE39 1312 aaPredicted RBP12.8□□□□□ -0.36
CPNE4-210ENST00000512332 KIF7Q2M1P5 1343 aa12.79□□□□□ -0.36
CPNE4-210ENST00000512332 ARHGEF12Q9NZN5 1544 aa12.79□□□□□ -0.36
CPNE4-210ENST00000512332 NUP155O75694 1391 aa12.78□□□□□ -0.36
CPNE4-210ENST00000512332 SHROOM2Q13796 1616 aa12.78□□□□□ -0.36
CPNE4-210ENST00000512332 KIF15Q9NS87 1388 aa12.77□□□□□ -0.37
CPNE4-210ENST00000512332 CCDC141Q6ZP82 1450 aa12.76□□□□□ -0.37
CPNE4-210ENST00000512332 PREX2Q70Z35 1606 aa12.76□□□□□ -0.37
CPNE4-210ENST00000512332 HNRNPUQ00839 825 aaKnown RBP eCLIP12.76□□□□□ -0.37
CPNE4-210ENST00000512332 CDC42BPBQ9Y5S2 1711 aa12.75□□□□□ -0.37
CPNE4-210ENST00000512332 SAMD9LQ8IVG5 1584 aa12.75□□□□□ -0.37
CPNE4-210ENST00000512332 RALGAPBQ86X10 1494 aa12.74□□□□□ -0.37
CPNE4-210ENST00000512332 TSHZ2Q9NRE2 1034 aa12.74□□□□□ -0.37
CPNE4-210ENST00000512332 USP47Q96K76 1375 aa12.74□□□□□ -0.37
CPNE4-210ENST00000512332 HNRNPMP52272 730 aaKnown RBP eCLIP12.74□□□□□ -0.37
CPNE4-210ENST00000512332 MYT1Q01538 1121 aa12.74□□□□□ -0.37
CPNE4-210ENST00000512332 MAST1Q9Y2H9 1570 aa12.73□□□□□ -0.37
CPNE4-210ENST00000512332 KDM5CP41229 1560 aa12.73□□□□□ -0.37
CPNE4-210ENST00000512332 CHD1O14646 1710 aa12.73□□□□□ -0.37
CPNE4-210ENST00000512332 ROCK2O75116 1388 aaKnown RBP12.72□□□□□ -0.37
CPNE4-210ENST00000512332 PLEKHH2Q8IVE3 1493 aa12.71□□□□□ -0.37
CPNE4-210ENST00000512332 ERICH6BQ5W0A0 696 aa12.71□□□□□ -0.37
CPNE4-210ENST00000512332 ABCC2Q92887 1545 aa12.71□□□□□ -0.38
CPNE4-210ENST00000512332 DHX29Q7Z478 1369 aaKnown RBP12.7□□□□□ -0.38
CPNE4-210ENST00000512332 CCDC184Q52MB2 194 aa12.7□□□□□ -0.38
CPNE4-210ENST00000512332 MRS2Q9HD23 443 aa12.7□□□□□ -0.38
CPNE4-210ENST00000512332 FAM135AQ9P2D6 1515 aa12.7□□□□□ -0.38
CPNE4-210ENST00000512332 BCORL1Q5H9F3 1711 aa12.69□□□□□ -0.38
CPNE4-210ENST00000512332 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.69□□□□□ -0.38
CPNE4-210ENST00000512332 ZBED9Q6R2W3 1325 aa12.69□□□□□ -0.38
CPNE4-210ENST00000512332 BCANQ96GW7 911 aa12.69□□□□□ -0.38
CPNE4-210ENST00000512332 SENP3Q9H4L4 574 aaPredicted RBP12.69□□□□□ -0.38
CPNE4-210ENST00000512332 UNC13BO14795 1591 aa12.68□□□□□ -0.38
CPNE4-210ENST00000512332 PLXNC1O60486 1568 aa12.67□□□□□ -0.38
CPNE4-210ENST00000512332 TTC37Q6PGP7 1564 aa12.67□□□□□ -0.38
CPNE4-210ENST00000512332 ARHGAP5Q13017 1502 aa12.67□□□□□ -0.38
CPNE4-210ENST00000512332 CARD11Q9BXL7 1154 aa12.66□□□□□ -0.38
CPNE4-210ENST00000512332 SYCP2Q9BX26 1530 aa12.66□□□□□ -0.38
CPNE4-210ENST00000512332 UHRF1BP1LA0JNW5 1464 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms