RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 LMTK2Q8IWU2 1503 aa3.43□□□□□ -1.86
TRAPPC13-211ENST00000512009 HECW1Q76N89 1606 aa3.43□□□□□ -1.86
TRAPPC13-211ENST00000512009 MLH3Q9UHC1 1453 aa3.42□□□□□ -1.86
TRAPPC13-211ENST00000512009 CRYBG1Q9Y4K1 1723 aa3.42□□□□□ -1.86
TRAPPC13-211ENST00000512009 IQGAP3Q86VI3 1631 aa3.42□□□□□ -1.86
TRAPPC13-211ENST00000512009 RAD54L2Q9Y4B4 1467 aa3.41□□□□□ -1.86
TRAPPC13-211ENST00000512009 DIP2CQ9Y2E4 1556 aa3.41□□□□□ -1.86
TRAPPC13-211ENST00000512009 CDC42BPAQ5VT25 1732 aa3.41□□□□□ -1.86
TRAPPC13-211ENST00000512009 QRICH2Q9H0J4 1663 aa3.41□□□□□ -1.86
TRAPPC13-211ENST00000512009 ADGBQ8N7X0 1667 aa3.41□□□□□ -1.86
TRAPPC13-211ENST00000512009 RIMS1Q86UR5 1692 aaKnown RBP3.4□□□□□ -1.86
TRAPPC13-211ENST00000512009 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.4□□□□□ -1.86
TRAPPC13-211ENST00000512009 PTPRTO14522 1441 aa3.4□□□□□ -1.87
TRAPPC13-211ENST00000512009 C3P01024 1663 aa3.4□□□□□ -1.87
TRAPPC13-211ENST00000512009 CENPFP49454 3210 aa3.39□□□□□ -1.87
TRAPPC13-211ENST00000512009 ARHGAP23Q9P227 1491 aa3.39□□□□□ -1.87
TRAPPC13-211ENST00000512009 SPATA31D1Q6ZQQ2 1576 aa3.39□□□□□ -1.87
TRAPPC13-211ENST00000512009 STRCP1A6NGW2 1772 aa3.39□□□□□ -1.87
TRAPPC13-211ENST00000512009 COL22A1Q8NFW1 1626 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC13-211ENST00000512009 TET3O43151 1660 aa3.39□□□□□ -1.87
TRAPPC13-211ENST00000512009 ARHGEF5Q12774 1597 aa3.39□□□□□ -1.87
TRAPPC13-211ENST00000512009 CAMSAP1Q5T5Y3 1602 aa3.38□□□□□ -1.87
TRAPPC13-211ENST00000512009 CICQ96RK0 1608 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC13-211ENST00000512009 ABCC1P33527 1531 aa3.38□□□□□ -1.87
TRAPPC13-211ENST00000512009 MST1RQ04912 1400 aa3.37□□□□□ -1.87
TRAPPC13-211ENST00000512009 IGF1RP08069 1367 aa3.37□□□□□ -1.87
TRAPPC13-211ENST00000512009 QSER1Q2KHR3 1735 aa3.37□□□□□ -1.87
TRAPPC13-211ENST00000512009 E9PCH4 1651 aa3.37□□□□□ -1.87
TRAPPC13-211ENST00000512009 UGGT1Q9NYU2 1555 aa3.37□□□□□ -1.87
TRAPPC13-211ENST00000512009 PLEKHH2Q8IVE3 1493 aa3.36□□□□□ -1.87
TRAPPC13-211ENST00000512009 NPATQ14207 1427 aa3.36□□□□□ -1.87
TRAPPC13-211ENST00000512009 MYO5CQ9NQX4 1742 aa3.36□□□□□ -1.87
TRAPPC13-211ENST00000512009 SLIT1O75093 1534 aa3.36□□□□□ -1.87
TRAPPC13-211ENST00000512009 DIP2AQ14689 1571 aa3.36□□□□□ -1.87
TRAPPC13-211ENST00000512009 IFT172Q9UG01 1749 aa3.36□□□□□ -1.87
TRAPPC13-211ENST00000512009 TEX14Q8IWB6 1497 aa3.36□□□□□ -1.87
TRAPPC13-211ENST00000512009 PRDM15P57071 1507 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC13-211ENST00000512009 RAPGEF2Q9Y4G8 1499 aa3.35□□□□□ -1.87
TRAPPC13-211ENST00000512009 LRP5O75197 1615 aa3.35□□□□□ -1.87
TRAPPC13-211ENST00000512009 TRPM1Q7Z4N2 1603 aa3.35□□□□□ -1.87
TRAPPC13-211ENST00000512009 CHIC1Q5VXU3 224 aa3.35□□□□□ -1.87
TRAPPC13-211ENST00000512009 KIF1AQ12756 1690 aa3.35□□□□□ -1.87
TRAPPC13-211ENST00000512009 DUOX2Q9NRD8 1548 aa3.35□□□□□ -1.87
TRAPPC13-211ENST00000512009 LAMB1P07942 1786 aa3.34□□□□□ -1.87
TRAPPC13-211ENST00000512009 ARHGAP31Q2M1Z3 1444 aa3.34□□□□□ -1.87
TRAPPC13-211ENST00000512009 XRN1Q8IZH2 1706 aaKnown RBP3.34□□□□□ -1.87
TRAPPC13-211ENST00000512009 UNC13BO14795 1591 aa3.34□□□□□ -1.87
TRAPPC13-211ENST00000512009 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.34□□□□□ -1.88
TRAPPC13-211ENST00000512009 SOGA1O94964 1423 aa3.33□□□□□ -1.88
TRAPPC13-211ENST00000512009 MYO3AQ8NEV4 1616 aa3.33□□□□□ -1.88
TRAPPC13-211ENST00000512009 PABPN1Q86U42 306 aaKnown RBP eCLIP3.33□□□□□ -1.88
TRAPPC13-211ENST00000512009 SAMD9LQ8IVG5 1584 aa3.33□□□□□ -1.88
TRAPPC13-211ENST00000512009 NUP153P49790 1475 aaKnown RBP3.33□□□□□ -1.88
TRAPPC13-211ENST00000512009 DNMT1P26358 1616 aaKnown RBP3.33□□□□□ -1.88
TRAPPC13-211ENST00000512009 SHPRHQ149N8 1683 aa3.33□□□□□ -1.88
TRAPPC13-211ENST00000512009 EEA1Q15075 1411 aa3.33□□□□□ -1.88
TRAPPC13-211ENST00000512009 NHSL1Q5SYE7 1610 aa3.32□□□□□ -1.88
TRAPPC13-211ENST00000512009 PHRF1Q9P1Y6 1649 aaKnown RBP3.32□□□□□ -1.88
TRAPPC13-211ENST00000512009 MARF1Q9Y4F3 1742 aaKnown RBP3.32□□□□□ -1.88
TRAPPC13-211ENST00000512009 KNDC1Q76NI1 1749 aa3.32□□□□□ -1.88
TRAPPC13-211ENST00000512009 CHD2O14647 1828 aaKnown RBP3.32□□□□□ -1.88
TRAPPC13-211ENST00000512009 EP400Q96L91 3159 aa3.31□□□□□ -1.88
TRAPPC13-211ENST00000512009 SCAF11Q99590 1463 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-211ENST00000512009 LRP6O75581 1613 aa3.31□□□□□ -1.88
TRAPPC13-211ENST00000512009 ABCC3O15438 1527 aa3.31□□□□□ -1.88
TRAPPC13-211ENST00000512009 CDK13Q14004 1512 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-211ENST00000512009 UBR1Q8IWV7 1749 aa3.31□□□□□ -1.88
TRAPPC13-211ENST00000512009 NRXN3Q9Y4C0 1643 aa3.31□□□□□ -1.88
TRAPPC13-211ENST00000512009 CDC42BPGQ6DT37 1551 aa3.3□□□□□ -1.88
TRAPPC13-211ENST00000512009 KIAA1107Q9UPP5 1409 aa3.3□□□□□ -1.88
TRAPPC13-211ENST00000512009 ZFYVE16Q7Z3T8 1539 aa3.3□□□□□ -1.88
TRAPPC13-211ENST00000512009 OSCARQ8IYS5 282 aa3.3□□□□□ -1.88
TRAPPC13-211ENST00000512009 MBD5Q9P267 1494 aa3.3□□□□□ -1.88
TRAPPC13-211ENST00000512009 USP32Q8NFA0 1604 aa3.29□□□□□ -1.88
TRAPPC13-211ENST00000512009 CEP152O94986 1710 aa3.29□□□□□ -1.88
TRAPPC13-211ENST00000512009 TUBGCP6Q96RT7 1819 aa3.29□□□□□ -1.88
TRAPPC13-211ENST00000512009 UACAQ9BZF9 1416 aa3.29□□□□□ -1.88
TRAPPC13-211ENST00000512009 ATP10AO60312 1499 aa3.29□□□□□ -1.88
TRAPPC13-211ENST00000512009 CDK12Q9NYV4 1490 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC13-211ENST00000512009 AHDC1Q5TGY3 1603 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC13-211ENST00000512009 ZNF831Q5JPB2 1677 aa3.28□□□□□ -1.88
TRAPPC13-211ENST00000512009 ATP10BO94823 1461 aa3.28□□□□□ -1.88
TRAPPC13-211ENST00000512009 ADGRL1O94910 1474 aa3.28□□□□□ -1.88
TRAPPC13-211ENST00000512009 RTEL1-TNFRSF6BF6WH68 1400 aa3.28□□□□□ -1.88
TRAPPC13-211ENST00000512009 SHANK2Q9UPX8 1470 aa3.28□□□□□ -1.88
TRAPPC13-211ENST00000512009 LRRC7Q96NW7 1537 aa3.28□□□□□ -1.89
TRAPPC13-211ENST00000512009 NCOA3Q9Y6Q9 1424 aa3.27□□□□□ -1.89
TRAPPC13-211ENST00000512009 GPATCH8Q9UKJ3 1502 aaKnown RBP3.27□□□□□ -1.89
TRAPPC13-211ENST00000512009 POGZQ7Z3K3 1410 aa3.27□□□□□ -1.89
TRAPPC13-211ENST00000512009 PTPRUQ92729 1446 aa3.27□□□□□ -1.89
TRAPPC13-211ENST00000512009 PTPRMP28827 1452 aa3.27□□□□□ -1.89
TRAPPC13-211ENST00000512009 GOLGA3Q08378 1498 aa3.27□□□□□ -1.89
TRAPPC13-211ENST00000512009 ABCA3Q99758 1704 aa3.26□□□□□ -1.89
TRAPPC13-211ENST00000512009 GCC2Q8IWJ2 1684 aa3.26□□□□□ -1.89
TRAPPC13-211ENST00000512009 CPS1P31327 1500 aa3.26□□□□□ -1.89
TRAPPC13-211ENST00000512009 TIAM1Q13009 1591 aa3.26□□□□□ -1.89
TRAPPC13-211ENST00000512009 NCOA1Q15788 1441 aa3.26□□□□□ -1.89
TRAPPC13-211ENST00000512009 BRCA2P51587 3418 aa3.26□□□□□ -1.89
TRAPPC13-211ENST00000512009 BPTFQ12830 3046 aa3.25□□□□□ -1.89
TRAPPC13-211ENST00000512009 ADGRL2O95490 1459 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms